Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g037720 Pisum sativum HOM05D001070 ORTHO05D010233 1.6e-161 572.8 314 100.0
Psat0s1160g0280 Pisum sativum HOM05D001070 ORTHO05D002096 3.0e-107 392.5 216 90.7
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 3.1e-59 233.0 320 43.8
Psat0s2011g0040 Pisum sativum HOM05D000729 ORTHO05D001063 5.8e-58 228.8 116 92.2
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 2.4e-43 180.3 253 43.1
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 1.4e-35 154.5 200 44.5
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.8e-30 137.5 330 31.2
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 6.7e-30 135.6 307 31.3
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 1.9e-29 134.0 312 30.4
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 8.2e-28 128.6 337 28.8
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.7e-25 120.9 299 29.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 3.8e-25 119.8 319 30.7
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 5.0e-25 119.4 312 27.9
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 5.0e-25 119.4 312 27.9
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.9e-24 117.5 297 31.0
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.6e-23 113.2 308 29.2
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.6e-23 113.2 308 29.2
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.5e-21 107.8 307 28.3
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 3.3e-21 106.7 309 27.2
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 5.7e-21 105.9 303 29.4
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 9.1e-19 98.6 294 29.3
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.6e-18 97.1 222 29.3
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 4.5e-18 96.3 298 28.9
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 4.5e-18 96.3 298 28.9
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 4.5e-18 96.3 298 28.9
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 4.5e-18 96.3 298 28.9
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 3.8e-17 93.2 123 40.7
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.1e-16 91.7 315 26.3
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 2.7e-15 87.0 309 26.5
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.0e-14 85.1 206 29.1
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 1.0e-14 85.1 206 29.1
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 3.0e-14 83.6 206 28.6
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 4.8e-12 76.3 294 26.5
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 6.3e-12 75.9 133 33.8
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 1.4e-11 74.7 263 25.9
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 4.1e-11 73.2 218 28.0
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.1e-11 73.2 192 31.2
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 1.6e-10 71.2 59 47.5
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.6e-10 71.2 59 47.5
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 1.6e-10 71.2 49 53.1
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 2.0e-10 70.9 49 53.1
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 7.7e-10 68.9 61 41.0
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 1.0e-09 68.6 211 28.9
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 1.0e-09 68.6 60 45.0
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 1.0e-09 68.6 60 45.0
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 1.0e-09 68.6 185 29.7
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.9e-09 67.0 49 51.0
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.1e-08 65.1 126 34.1
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.5e-08 64.7 49 49.0
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 4.2e-08 63.2 143 29.4
Oeu058851.1 Olea europaea HOM05D001070 ORTHO05D010233 7.2e-08 62.4 59 42.4
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 1.6e-07 61.2 145 27.6
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 4.7e-07 59.7 141 29.8
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.8e-06 57.8 126 32.5
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.0e-06 57.0 119 31.9
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 5.2e-06 56.2 100 35.0
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 8.8e-06 55.5 114 32.5


User provided reference genes

Program Settings