Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g030960 Pisum sativum HOM05D011238 ORTHO05D004093 1.6e-157 559.3 266 100.0
TPR.G31069 Trifolium pratense HOM05D011238 ORTHO05D004093 5.3e-28 129.0 162 39.5
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 2.2e-26 123.6 162 38.9
Psat5g032200 Pisum sativum HOM05D011238 ORTHO05D004093 2.9e-18 96.7 114 41.2
Psat1g044840 Pisum sativum HOM05D000003 ORTHO05D000004 8.5e-18 95.1 126 41.3
Psat1g177560 Pisum sativum HOM05D017433 ORTHO05D016329 4.2e-17 92.8 159 38.4
Psat7g124640 Pisum sativum HOM05D000003 ORTHO05D000004 6.1e-16 89.0 110 42.7
Psat2g070240 Pisum sativum HOM05D000003 ORTHO05D000006 1.8e-15 87.4 113 38.9
TPR.G14786 Trifolium pratense HOM05D000071 ORTHO05D000029 5.7e-14 82.4 174 28.2
Psat3g068440 Pisum sativum HOM05D011238 ORTHO05D004093 1.4e-12 77.8 87 46.0
TPR.G31700 Trifolium pratense HOM05D000003 ORTHO05D000004 7.0e-12 75.5 117 30.8
Psat7g206880 Pisum sativum HOM05D000003 ORTHO05D000004 1.2e-11 74.7 62 58.1
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 1.6e-11 74.3 205 26.3
Psat7g041640 Pisum sativum HOM05D000003 ORTHO05D000006 2.6e-11 73.6 95 38.9
TPR.G32297 Trifolium pratense HOM05D000003 ORTHO05D000004 2.2e-10 70.5 108 36.1
Medtr8g028785 Medicago truncatula HOM05D000147 ORTHO05D004093 1.9e-09 67.4 161 29.2
Psat2g010200 Pisum sativum HOM05D000003 ORTHO05D000004 4.2e-09 66.2 72 47.2
Medtr1g051330 Medicago truncatula HOM05D000003 ORTHO05D000004 7.2e-09 65.5 103 31.1
TPR.G631 Trifolium pratense HOM05D000003 ORTHO05D000004 9.4e-09 65.1 184 22.3
AT3G09510 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 2.1e-08 63.9 169 27.8
TPR.G34771 Trifolium pratense HOM05D000003 ORTHO05D000004 2.1e-08 63.9 117 24.8
BcaB01g00937 Brassica carinata HOM05D000003 ORTHO05D000004 2.7e-08 63.5 157 22.9
TPR.G22189 Trifolium pratense HOM05D000003 ORTHO05D013548 3.6e-08 63.2 107 30.8
TPR.G24215 Trifolium pratense HOM05D011238 ORTHO05D004093 3.6e-08 63.2 101 30.7
AT2G02650 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 8.0e-08 62.0 169 25.4
TPR.G3250 Trifolium pratense HOM05D011238 ORTHO05D004093 1.0e-07 61.6 102 33.3
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 2.3e-07 60.5 161 25.5
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-07 58.5 142 23.9
TPR.G18502 Trifolium pratense HOM05D000003 ORTHO05D000006 1.2e-06 58.2 105 32.4
TPR.G16652 Trifolium pratense HOM05D011174 ORTHO05D004093 1.5e-06 57.8 126 25.4
Medtr8g031330 Medicago truncatula HOM05D058715 ORTHO05D048961 2.0e-06 57.4 157 22.3
TPR.G16970 Trifolium pratense HOM05D011238 ORTHO05D004093 2.0e-06 57.4 100 32.0
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 4.4e-06 56.2 152 23.7
CANSAT01G2337 Cannabis sativa HOM05D000003 ORTHO05D000006 7.5e-06 55.5 79 38.0
CANSAT21G0332 Cannabis sativa HOM05D000003 ORTHO05D000006 7.5e-06 55.5 109 30.3
Medtr4g098780 Medicago truncatula HOM05D011238 ORTHO05D004093 7.5e-06 55.5 103 30.1
CANSAT35G1728 Cannabis sativa HOM05D000003 ORTHO05D000004 9.7e-06 55.1 120 30.0
CANSAT56G0110 Cannabis sativa HOM05D000003 ORTHO05D000006 9.7e-06 55.1 77 32.5


User provided reference genes

Program Settings