Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 7.3e-161 570.5 280 100.0
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 3.1e-143 511.9 281 90.7
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 7.6e-134 480.7 280 83.6
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 3.3e-129 465.3 281 82.2
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 2.8e-128 462.2 281 81.5
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 8.4e-125 450.7 267 83.9
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 3.3e-121 438.7 272 79.4
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 4.3e-121 438.3 352 65.1
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 3.3e-113 412.1 305 69.2
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 1.6e-112 409.8 312 67.6
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.7e-101 373.2 204 84.3
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 2.5e-100 369.4 280 64.3
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 4.2e-100 368.6 283 63.6
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 5.5e-100 368.2 282 64.9
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 1.6e-99 366.7 289 64.7
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 1.8e-98 363.2 281 63.0
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 1.1e-97 360.5 281 62.6
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 1.1e-97 360.5 281 63.3
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 2.2e-96 356.3 281 61.9
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 6.3e-96 354.8 281 62.6
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 1.1e-95 354.0 280 60.4
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 5.3e-95 351.7 281 61.2
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 6.9e-95 351.3 281 61.9
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 1.5e-94 350.1 281 61.9
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 2.2e-93 346.3 284 60.2
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 2.9e-93 345.9 284 60.2
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 2.9e-93 345.9 282 61.3
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 8.5e-93 344.4 282 59.9
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 3.2e-92 342.4 281 59.4
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 5.5e-92 341.7 284 58.1
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 1.6e-91 340.1 276 60.5
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 3.6e-91 339.0 279 59.1
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 6.1e-91 338.2 277 58.8
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 1.8e-90 336.7 279 57.7
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 6.7e-90 334.7 284 57.7
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 8.8e-90 334.3 276 59.1
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 1.1e-89 334.0 282 59.6
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 1.1e-89 334.0 276 60.1
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 1.1e-89 334.0 281 59.4
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 2.0e-89 333.2 280 60.0
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 2.0e-89 333.2 282 59.2
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 2.5e-89 332.8 284 56.7
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 3.3e-89 332.4 278 59.7
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 3.3e-89 332.4 281 59.8
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 4.3e-89 332.0 281 57.7
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 4.3e-89 332.0 279 57.0
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 7.4e-89 331.3 276 59.4
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 9.7e-89 330.9 278 59.7
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 9.7e-89 330.9 278 59.7
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 9.7e-89 330.9 280 57.9
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 1.7e-88 330.1 279 58.1
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.7e-88 330.1 273 59.0
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 2.2e-88 329.7 281 59.1
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 2.2e-88 329.7 277 61.0
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 2.8e-88 329.3 276 58.0
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 2.8e-88 329.3 211 72.0
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 6.3e-88 328.2 275 59.3
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 8.2e-88 327.8 277 56.0
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 1.1e-87 327.4 289 56.4
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 1.1e-87 327.4 283 55.5
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 1.4e-87 327.0 273 58.6
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 1.8e-87 326.6 280 58.9
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 2.4e-87 326.2 275 58.5
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 3.1e-87 325.9 284 56.7
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 5.3e-87 325.1 276 59.1
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 5.3e-87 325.1 278 57.6
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 6.9e-87 324.7 276 57.6
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 6.9e-87 324.7 273 58.2
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 6.9e-87 324.7 281 58.0
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 4.5e-86 322.0 276 57.6
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 2.9e-85 319.3 282 60.6
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 2.5e-84 316.2 279 54.8
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 4.7e-83 312.0 280 53.9
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 3.9e-82 308.9 277 56.3
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 5.1e-82 308.5 376 46.3
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 2.8e-80 302.8 269 57.2
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 1.1e-79 300.8 285 54.0
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 1.5e-78 297.0 276 53.6
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 1.5e-78 297.0 277 53.1
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 1.5e-76 290.4 272 52.2
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 6.1e-75 285.0 248 58.1
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 3.1e-71 272.7 279 50.2
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 1.2e-70 270.8 260 53.8
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 3.8e-69 265.8 258 53.9
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 1.5e-68 263.8 209 59.8
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.6e-67 260.4 308 48.7
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 7.5e-65 251.5 500 34.4
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 1.7e-61 240.4 157 67.5
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 5.0e-61 238.8 279 45.2
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 1.8e-55 220.3 225 52.9
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 3.5e-54 216.1 184 60.3
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 2.5e-52 209.9 187 59.4
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 2.8e-51 206.5 208 45.7
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 2.6e-49 199.9 190 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 7.0e-47 191.8 232 42.2
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 1.2e-41 174.5 192 41.1
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 4.4e-41 172.6 110 65.5
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 9.8e-41 171.4 206 40.8
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 4.6e-38 162.5 196 46.9
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 6.8e-34 148.7 102 61.8
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 2.1e-30 137.1 86 76.7
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 5.6e-28 129.0 123 50.4
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 1.2e-25 121.3 140 46.4
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 2.2e-24 117.1 180 39.4
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 1.4e-23 114.4 85 61.2
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 4.6e-22 109.4 70 67.1
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 6.0e-22 109.0 280 32.1
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 2.4e-18 97.1 71 57.7
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 7.6e-09 65.5 68 41.2


User provided reference genes

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