Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g023080 Pisum sativum HOM05D002665 ORTHO05D002991 2.3e-55 219.5 209 100.0
Phvul.009G104300 Phaseolus vulgaris HOM05D002665 ORTHO05D002991 7.6e-30 134.8 191 70.7
VMungo1309G0855 Vigna mungo HOM05D002665 ORTHO05D002991 6.4e-29 131.7 192 75.0
arahy.Tifrunner.gnm1.ann1.DQG69K Arachis hypogaea HOM05D002665 ORTHO05D002991 1.3e-18 97.4 97 60.8
FAN27G0789 Fragaria x ananassa HOM05D002665 ORTHO05D002991 3.0e-18 96.3 203 72.9
Lalb_Chr23g0269331 Lupinus albus HOM05D002665 ORTHO05D002991 5.1e-18 95.5 205 57.1
Lj1g0017245 Lotus japonicus HOM05D002665 ORTHO05D002991 6.7e-18 95.1 192 71.4
Gohir.D05G068300 Gossypium hirsutum HOM05D002665 ORTHO05D002991 5.7e-17 92.0 196 51.0
Gorai.009G069200 Gossypium raimondii HOM05D002665 ORTHO05D002991 5.7e-17 92.0 196 39.8
Thecc.09G004300 Theobroma cacao HOM05D002665 ORTHO05D002991 7.4e-17 91.7 193 51.3
arahy.Tifrunner.gnm1.ann1.D04E55 Arachis hypogaea HOM05D002665 ORTHO05D002991 1.3e-16 90.9 105 55.2
Ah.11g044010 Amaranthus hybridus HOM05D002665 ORTHO05D002991 1.6e-16 90.5 202 45.0
MBI13_g31541_MAGBIO Magnolia biondii HOM05D002665 ORTHO05D002991 1.6e-16 90.5 97 53.6
Lalb_Chr11g0064281 Lupinus albus HOM05D002665 ORTHO05D002991 2.8e-16 89.7 206 60.2
Nn2g12753 Nelumbo nucifera HOM05D002665 ORTHO05D002991 2.8e-16 89.7 94 75.5
TAR383G0456 Trochodendron aralioides HOM05D002665 ORTHO05D002991 2.8e-16 89.7 193 56.0
Gohir.A05G065951 Gossypium hirsutum HOM05D002665 ORTHO05D002991 6.2e-16 88.6 196 45.4
FvH4_2g36360 Fragaria vesca HOM05D002665 ORTHO05D002991 8.2e-16 88.2 203 70.9
FAN15G1304 Fragaria x ananassa HOM05D002665 ORTHO05D002991 1.1e-15 87.8 203 70.0
Sc09g0007840 Simmondsia chinensis HOM05D002665 ORTHO05D002991 1.4e-15 87.4 199 45.7
Lj8C424T3 Lonicera japonica HOM05D002665 ORTHO05D002991 2.4e-15 86.7 203 57.1
Lj8C430T1 Lonicera japonica HOM05D002665 ORTHO05D002991 2.4e-15 86.7 203 57.1
Potri.006G276900 Populus trichocarpa HOM05D002665 ORTHO05D002991 2.4e-15 86.7 195 43.6
Duzib168G2001 Durio zibethinus HOM05D002665 ORTHO05D002991 6.9e-15 85.1 197 43.1
TAR625G0782 Trochodendron aralioides HOM05D002665 ORTHO05D002991 5.8e-14 82.0 94 60.6
CsaV3_3G047330 Cucumis sativus L. HOM05D002665 ORTHO05D002991 7.6e-14 81.6 96 51.0
MELO3C003595.2 Cucumis melo HOM05D002665 ORTHO05D002991 1.3e-13 80.9 93 51.6
MBI16_g34881_MAGBIO Magnolia biondii HOM05D002665 ORTHO05D002991 1.7e-13 80.5 196 41.3
PSO170G0184 Papaver somniferum HOM05D002665 ORTHO05D002991 2.2e-13 80.1 193 32.6
Hund19391 Selenicereus undatus HOM05D002665 ORTHO05D002991 3.8e-13 79.3 202 51.5
PSO144G0166 Papaver somniferum HOM05D002665 ORTHO05D002991 8.4e-13 78.2 193 31.6
Actinidia01290 Actinidia chinensis HOM05D002665 ORTHO05D002991 1.1e-12 77.8 193 32.1
CsaV3_2G031150 Cucumis sativus L. HOM05D002665 ORTHO05D002991 1.4e-12 77.4 200 33.0
Atru.chr7.2676 Acer truncatum HOM05D002665 ORTHO05D002991 1.9e-12 77.0 205 67.3
Aqoxy7G02750 Aquilegia oxysepala HOM05D002665 ORTHO05D002991 1.9e-12 77.0 93 49.5
Manes.03G002000 Manihot esculenta HOM05D002665 ORTHO05D002991 1.9e-12 77.0 196 62.8
CARHR239220 Cardamine hirsuta HOM05D002665 ORTHO05D002991 5.5e-12 75.5 200 54.0
Hund03271 Selenicereus undatus HOM05D002665 ORTHO05D002991 7.1e-12 75.1 201 50.2
TAR626G1487 Trochodendron aralioides HOM05D002665 ORTHO05D002991 7.1e-12 75.1 193 42.0
CDE02G3722 Ceratophyllum demersum HOM05D003490 ORTHO05D004835 1.2e-11 74.3 93 46.2
Lj7A750G48 Lonicera japonica HOM05D002665 ORTHO05D002991 1.2e-11 74.3 97 45.4
Sabra18G0001800 Salix brachista HOM05D002665 ORTHO05D002991 1.6e-11 73.9 201 51.2
Migut.A00460 Erythranthe guttata HOM05D002665 ORTHO05D002991 2.1e-11 73.6 195 49.2
Sabra06G0214600 Salix brachista HOM05D002665 ORTHO05D002991 2.7e-11 73.2 195 41.0
Manes.16G136900 Manihot esculenta HOM05D002665 ORTHO05D002991 3.5e-11 72.8 196 60.2
Carub.0007s0922 Capsella rubella HOM05D002665 ORTHO05D002991 6.1e-11 72.0 196 48.0
Oeu059295.1 Olea europaea HOM05D002665 ORTHO05D002991 7.9e-11 71.6 94 44.7
Lsat_1_v5_gn_3_24601 Lactuca sativa HOM05D002665 ORTHO05D002991 1.3e-10 70.9 93 46.2
Solyc07g008970.4 Solanum lycopersicum HOM05D002665 ORTHO05D002991 1.3e-10 70.9 162 32.1
Medtr3g109330 Medicago truncatula HOM05D002665 ORTHO05D002991 1.8e-10 70.5 192 69.3
Eucgr.C02115 Eucalyptus grandis HOM05D002665 ORTHO05D002991 2.3e-10 70.1 93 48.4
Migut.E01410 Erythranthe guttata HOM05D002665 ORTHO05D002991 3.9e-10 69.3 97 43.3
Sed0013595 Sechium edule HOM05D002665 ORTHO05D002991 3.9e-10 69.3 91 48.4
A01p06970 Brassica napus HOM05D002665 ORTHO05D002991 6.7e-10 68.6 97 44.3
BraA01t00645Z Brassica rapa HOM05D002665 ORTHO05D002991 8.7e-10 68.2 97 43.3
CARHR117640 Cardamine hirsuta HOM05D002665 ORTHO05D002991 8.7e-10 68.2 97 55.7
QL12p026047 Quercus lobata HOM05D002665 ORTHO05D002991 1.1e-09 67.8 209 56.0
CSS0018914 Camellia sinensis var. sinensis HOM05D002665 ORTHO05D002991 1.5e-09 67.4 208 39.4
SGA_v2.0_scaffold27G11647 Striga asiatica HOM05D002665 ORTHO05D002991 1.9e-09 67.0 94 52.1
DCAR_019798 Daucus carota HOM05D002665 ORTHO05D002991 2.5e-09 66.6 92 45.7
Duzib168G1639 Durio zibethinus HOM05D002665 ORTHO05D002991 2.5e-09 66.6 92 43.5
ATR0626G381 Amborella trichopoda HOM05D002665 ORTHO05D002991 3.3e-09 66.2 97 41.2
Oeu002014.1 Olea europaea HOM05D002665 ORTHO05D002991 3.3e-09 66.2 94 42.6
Cpa.g.sc328.1 Carica papaya HOM05D002665 ORTHO05D002991 4.3e-09 65.9 202 56.4
MSTRG.11823 Avicennia marina HOM05D002665 ORTHO05D002991 5.7e-09 65.5 94 42.6
Carub.0004s0377 Capsella rubella HOM05D002665 ORTHO05D002991 5.7e-09 65.5 198 48.0
Thhalv10025225m.g Eutrema salsugineum HOM05D002665 ORTHO05D002991 5.7e-09 65.5 199 38.7
Glyma.04G078500 Glycine max HOM05D002665 ORTHO05D002991 5.7e-09 65.5 193 61.7
CDE06G0091 Ceratophyllum demersum HOM05D002665 ORTHO05D002991 7.4e-09 65.1 99 41.4
BcaC09g51913 Brassica carinata HOM05D002665 ORTHO05D002991 9.7e-09 64.7 198 44.9
BcaNung05320 Brassica carinata HOM05D002665 ORTHO05D002991 9.7e-09 64.7 94 42.6
C01p07700 Brassica napus HOM05D002665 ORTHO05D002991 9.7e-09 64.7 198 44.4
BolC1t00751H Brassica oleracea HOM05D002665 ORTHO05D002991 9.7e-09 64.7 198 39.9
AL4G14850 Arabidopsis lyrata HOM05D002665 ORTHO05D002991 1.3e-08 64.3 97 56.7
Thecc.09G183600 Theobroma cacao HOM05D002665 ORTHO05D002991 1.6e-08 63.9 92 41.3
Zm00001eb035730 Zea mays HOM05D002665 ORTHO05D002991 1.6e-08 63.9 97 53.6
Os09g0497700 Oryza sativa ssp. japonica HOM05D002665 ORTHO05D002991 2.2e-08 63.5 93 61.3
AL7G20740 Arabidopsis lyrata HOM05D002665 ORTHO05D002991 2.8e-08 63.2 196 55.1
Ca_15631_v3 Cicer arietinum L. HOM05D002665 ORTHO05D002991 2.8e-08 63.2 45 75.6
C07p58550 Brassica napus HOM05D002665 ORTHO05D002991 3.7e-08 62.8 94 42.6
BolC7t46310H Brassica oleracea HOM05D002665 ORTHO05D002991 3.7e-08 62.8 94 42.6
SGA_v2.0_scaffold193G40649 Striga asiatica HOM05D002665 ORTHO05D002991 3.7e-08 62.8 93 41.9
MD08G1121400 Malus domestica HOM05D002665 ORTHO05D002991 4.8e-08 62.4 203 45.3
HPP92_004710 Vanilla planifolia HOM05D002665 ORTHO05D002991 4.8e-08 62.4 93 38.7
TPR.G1341 Trifolium pratense HOM05D002665 ORTHO05D002991 6.3e-08 62.0 45 75.6
unitig_747.g21906 Utricularia gibba HOM05D002665 ORTHO05D002991 1.1e-07 61.2 95 40.0
AUR62020636 Chenopodium quinoa HOM05D002665 ORTHO05D002991 1.4e-07 60.8 200 38.5
COL.COLO4_18617 Corchorus olitorius HOM05D002665 ORTHO05D002991 1.4e-07 60.8 192 57.3
ECA246G1443 Erigeron canadensis HOM05D002665 ORTHO05D002991 1.8e-07 60.5 94 52.1
Dinv36353 Davidia involucrata HOM05D002665 ORTHO05D002991 2.4e-07 60.1 197 60.4
Sp7g29200 Schrenkiella parvula HOM05D002665 ORTHO05D002991 2.4e-07 60.1 97 55.7
MSTRG.1740 Avicennia marina HOM05D002665 ORTHO05D002991 4.1e-07 59.3 90 40.0
A03p60640 Brassica napus HOM05D002665 ORTHO05D002991 9.0e-07 58.2 94 39.4
BraA03t15106Z Brassica rapa HOM05D002665 ORTHO05D002991 1.2e-06 57.8 193 36.8
Sed0019725 Sechium edule HOM05D002665 ORTHO05D002991 1.5e-06 57.4 199 31.2
AUR62038745 Chenopodium quinoa HOM05D002665 ORTHO05D002991 2.6e-06 56.6 200 45.5
MD15G1100200 Malus domestica HOM05D002665 ORTHO05D002991 3.4e-06 56.2 68 66.2
Potri.018G003700 Populus trichocarpa HOM05D002665 ORTHO05D002991 4.5e-06 55.8 97 55.7
Sc06g0001220 Simmondsia chinensis HOM05D002665 ORTHO05D002991 4.5e-06 55.8 96 61.5
AT4G31340 Arabidopsis thaliana HOM05D002665 ORTHO05D002991 5.9e-06 55.5 196 54.6
Aa31LG2G19020 Aethionema arabicum HOM05D002665 ORTHO05D002991 7.7e-06 55.1 197 52.8
Zm00001eb102150 Zea mays HOM05D002665 ORTHO05D002991 7.7e-06 55.1 94 40.4
Cc00_g12730 Coffea canephora HOM05D002665 ORTHO05D002991 1.0e-05 54.7 83 50.6
Glyma.06G080100 Glycine max HOM05D002665 ORTHO05D002991 1.0e-05 54.7 49 65.3
HPP92_010794 Vanilla planifolia HOM05D002665 ORTHO05D002991 1.0e-05 54.7 97 33.0


User provided reference genes

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