Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g020760 Pisum sativum HOM05D004435 ORTHO05D005103 1.4e-56 222.6 106 100.0
Psat0ss888g0080 Pisum sativum HOM05D004435 ORTHO05D005103 4.7e-52 207.6 106 94.3
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 9.8e-42 173.3 96 88.5
Psat2g140840 Pisum sativum HOM05D004435 ORTHO05D005103 1.1e-40 169.9 97 85.6
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 4.3e-37 157.9 96 80.2
Psat4g016800 Pisum sativum HOM05D004435 ORTHO05D005103 1.6e-36 156.0 91 85.7
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 5.2e-35 151.0 96 79.2
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 2.9e-33 145.2 100 74.0
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 1.1e-32 143.3 100 73.0
Glyma.16G023300 Glycine max HOM05D004435 ORTHO05D005103 4.1e-32 141.4 105 66.7
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 1.1e-29 133.3 105 64.8
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 1.0e-27 126.7 105 61.9
TPR.G40720 Trifolium pratense HOM05D004435 ORTHO05D005103 1.0e-27 126.7 72 83.3
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 1.4e-27 126.3 105 63.8
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 1.8e-27 125.9 105 61.9
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 5.2e-27 124.4 105 62.9
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 2.9e-25 118.6 105 60.0
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 2.3e-14 82.4 84 53.6
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 3.9e-14 81.6 86 50.0
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 3.9e-14 81.6 96 49.0
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 6.6e-14 80.9 86 48.8
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 1.9e-13 79.3 86 46.5
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 5.6e-13 77.8 100 39.0
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 5.6e-13 77.8 70 55.7
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 5.6e-13 77.8 70 55.7
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 5.6e-13 77.8 70 55.7
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 9.5e-13 77.0 84 48.8
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 2.8e-12 75.5 57 63.2
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.8e-12 75.5 57 63.2
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 2.8e-12 75.5 57 63.2
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 3.6e-12 75.1 84 45.2
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 6.2e-12 74.3 90 43.3
Lj7A498G38 Lonicera japonica HOM05D004435 ORTHO05D005103 3.1e-11 72.0 80 47.5
TAR374G0936 Trochodendron aralioides HOM05D004435 ORTHO05D005103 6.8e-11 70.9 98 42.9
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 8.9e-11 70.5 89 44.9
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 8.9e-11 70.5 94 39.4
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 1.5e-10 69.7 93 43.0
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 2.0e-10 69.3 91 41.8
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 2.0e-10 69.3 56 53.6
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 2.6e-10 68.9 89 41.6
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 3.4e-10 68.6 85 41.2
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 5.8e-10 67.8 100 38.0
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 5.8e-10 67.8 60 53.3
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 5.8e-10 67.8 89 41.6
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 7.6e-10 67.4 72 41.7
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 9.9e-10 67.0 64 48.4
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 2.2e-09 65.9 92 35.9
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 2.9e-09 65.5 79 45.6
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 3.8e-09 65.1 71 46.5
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 4.9e-09 64.7 90 41.1
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 6.4e-09 64.3 50 60.0
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 8.4e-09 63.9 79 44.3
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 8.4e-09 63.9 79 44.3
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 1.1e-08 63.5 77 48.1
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 1.1e-08 63.5 76 40.8
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 1.1e-08 63.5 85 43.5
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 3.2e-08 62.0 79 43.0
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 5.4e-08 61.2 76 38.2
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 7.1e-08 60.8 101 33.7
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 9.2e-08 60.5 57 56.1
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 1.6e-07 59.7 98 38.8
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 2.1e-07 59.3 91 35.2
DCAR_008666 Daucus carota HOM05D004435 ORTHO05D005103 6.0e-07 57.8 72 38.9
DCAR_008667 Daucus carota HOM05D004435 ORTHO05D005103 6.0e-07 57.8 72 38.9
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 1.0e-06 57.0 83 38.6
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 6.6e-06 54.3 67 37.3


User provided reference genes

Program Settings