Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 1.7e-42 175.6 89 100.0
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 1.0e-31 139.8 89 80.9
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 7.2e-30 133.7 90 77.8
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 7.2e-30 133.7 89 78.7
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 9.4e-30 133.3 89 77.5
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 2.0e-27 125.6 89 75.3
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 2.0e-27 125.6 88 75.0
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 4.4e-27 124.4 90 76.7
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 4.8e-26 120.9 94 73.4
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 7.7e-24 113.6 90 68.9
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 6.5e-23 110.5 85 68.2
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 1.8e-20 102.4 90 63.3
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 3.0e-20 101.7 95 66.3
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 3.0e-20 101.7 74 66.2
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 4.0e-20 101.3 95 61.1
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 4.0e-20 101.3 86 60.5
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 5.2e-20 100.9 70 75.7
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 6.8e-20 100.5 86 60.5
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 6.8e-20 100.5 98 61.2
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 8.8e-20 100.1 90 65.6
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 8.8e-20 100.1 93 62.4
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.5e-19 99.4 96 57.3
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 3.4e-19 98.2 94 60.6
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 5.7e-19 97.4 91 61.5
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 1.3e-18 96.3 88 64.8
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 1.7e-18 95.9 86 59.3
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 2.2e-18 95.5 98 59.2
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.8e-18 95.1 75 66.7
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.8e-18 95.1 75 66.7
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 3.7e-18 94.7 91 61.5
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 6.3e-18 94.0 95 60.0
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 8.3e-18 93.6 94 59.6
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 1.1e-17 93.2 75 65.3
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 1.8e-17 92.4 91 57.1
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 1.8e-17 92.4 98 53.1
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 1.8e-17 92.4 86 58.1
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 2.4e-17 92.0 77 64.9
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 2.4e-17 92.0 97 50.5
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 3.1e-17 91.7 97 50.5
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 3.1e-17 91.7 70 67.1
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 4.1e-17 91.3 86 58.1
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 5.4e-17 90.9 102 53.9
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 7.0e-17 90.5 72 65.3
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 9.1e-17 90.1 70 70.0
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 9.1e-17 90.1 99 51.5
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 1.6e-16 89.4 97 49.5
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 2.0e-16 89.0 111 46.8
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 2.7e-16 88.6 109 49.5
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 2.7e-16 88.6 107 53.3
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 4.5e-16 87.8 79 64.6
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 5.9e-16 87.4 109 49.5
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 5.9e-16 87.4 97 50.5
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 7.7e-16 87.0 92 62.0
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 2.3e-15 85.5 75 61.3
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 5.0e-15 84.3 77 58.4
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 8.6e-15 83.6 70 71.4
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 4.2e-14 81.3 77 59.7
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 7.2e-14 80.5 101 49.5
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 7.2e-14 80.5 96 54.2
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 2.1e-13 79.0 74 60.8
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 2.8e-13 78.6 74 56.8
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 1.0e-12 76.6 70 62.9
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 1.0e-12 76.6 70 62.9
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 1.4e-12 76.3 75 58.7
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 4.0e-12 74.7 104 50.0
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 2.0e-11 72.4 74 56.8
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 2.0e-11 72.4 103 47.6
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 3.4e-11 71.6 92 52.2
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 6.6e-07 57.4 78 44.9
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 1.5e-06 56.2 90 42.2


User provided reference genes

Program Settings