Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g006600 Pisum sativum HOM05D010359 ORTHO05D002252 2.1e-42 177.2 90 100.0
Psat5g006440 Pisum sativum HOM05D010359 ORTHO05D002252 2.0e-29 134.0 90 74.4
Psat7g116800 Pisum sativum HOM05D010359 ORTHO05D002252 4.0e-22 109.8 77 70.1
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 3.4e-21 106.7 86 67.4
Psat5g006560 Pisum sativum HOM05D010359 ORTHO05D002252 1.1e-19 101.7 88 63.6
Medtr3g116430 Medicago truncatula HOM05D010359 ORTHO05D002252 3.3e-16 90.1 86 58.1
TPR.G38150 Trifolium pratense HOM05D010359 ORTHO05D002252 3.3e-16 90.1 86 57.0
Medtr3g034640 Medicago truncatula HOM05D010359 ORTHO05D002252 7.4e-16 89.0 86 58.1
Medtr3g116440 Medicago truncatula HOM05D010359 ORTHO05D002252 1.3e-15 88.2 110 48.2
Glyma.11G119000 Glycine max HOM05D010359 ORTHO05D002252 1.0e-12 78.6 92 48.9
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 1.3e-12 78.2 94 50.0
arahy.Tifrunner.gnm1.ann1.8VXK9L Arachis hypogaea HOM05D010359 ORTHO05D002252 1.9e-11 74.3 103 47.6
Medtr3g107810 Medicago truncatula HOM05D010359 ORTHO05D002252 5.5e-11 72.8 84 51.2
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 5.5e-11 72.8 94 46.8
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 7.2e-11 72.4 105 41.0
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 2.7e-10 70.5 95 47.4
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 6.1e-10 69.3 96 44.8
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 3.0e-09 67.0 96 43.8
TPR.G24483 Trifolium pratense HOM05D010359 ORTHO05D002252 3.0e-09 67.0 88 46.6
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 1.5e-08 64.7 57 57.9
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.3e-08 63.5 86 41.9
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 5.7e-08 62.8 88 44.3
Lalb_Chr23g0265421 Lupinus albus HOM05D032364 ORTHO05D002252 5.7e-08 62.8 92 46.7
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 7.4e-08 62.4 89 44.9
Glyma.06G013200 Glycine max HOM05D010359 ORTHO05D002252 9.7e-08 62.0 102 40.2
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 9.7e-08 62.0 87 47.1
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 3.7e-07 60.1 93 43.0
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 4.8e-07 59.7 78 43.6
arahy.Tifrunner.gnm1.ann1.JI131A Arachis hypogaea HOM05D023705 ORTHO05D002252 1.1e-06 58.5 88 40.9
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.1e-06 58.5 116 37.1
Lalb_Chr00c44g0412601 Lupinus albus HOM05D032364 ORTHO05D002252 1.1e-06 58.5 84 44.0
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 1.1e-06 58.5 85 41.2
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.8e-06 57.8 86 38.4
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 6.9e-06 55.8 91 40.7


User provided reference genes

Program Settings