Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 1.9e-47 192.6 131 100.0
Psat5g006560 Pisum sativum HOM05D010359 ORTHO05D002252 2.4e-37 159.1 182 69.8
Psat5g006600 Pisum sativum HOM05D010359 ORTHO05D002252 6.2e-22 107.8 86 67.4
Psat5g006440 Pisum sativum HOM05D010359 ORTHO05D002252 1.8e-21 106.3 87 67.8
TPR.G38150 Trifolium pratense HOM05D010359 ORTHO05D002252 2.3e-16 89.4 88 55.7
Medtr3g034640 Medicago truncatula HOM05D010359 ORTHO05D002252 5.7e-15 84.7 77 62.3
Medtr3g116430 Medicago truncatula HOM05D010359 ORTHO05D002252 2.1e-14 82.8 77 61.0
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 3.1e-13 79.0 96 49.0
Psat7g116800 Pisum sativum HOM05D010359 ORTHO05D002252 6.9e-13 77.8 73 57.5
Medtr3g116440 Medicago truncatula HOM05D010359 ORTHO05D002252 1.5e-12 76.6 108 45.4
Medtr4g069810 Medicago truncatula HOM05D010359 ORTHO05D002252 3.4e-12 75.5 149 36.2
Glyma.11G119000 Glycine max HOM05D010359 ORTHO05D002252 1.0e-11 73.9 94 44.7
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 2.9e-11 72.4 97 47.4
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 2.9e-11 72.4 94 47.9
TPR.G24483 Trifolium pratense HOM05D010359 ORTHO05D002252 3.8e-11 72.0 88 50.0
arahy.Tifrunner.gnm1.ann1.8VXK9L Arachis hypogaea HOM05D010359 ORTHO05D002252 1.4e-10 70.1 103 44.7
Lalb_Chr00c44g0412601 Lupinus albus HOM05D032364 ORTHO05D002252 1.4e-10 70.1 76 53.9
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 1.4e-10 70.1 79 49.4
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 4.2e-10 68.6 93 49.5
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 9.3e-10 67.4 87 47.1
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 9.3e-10 67.4 75 49.3
Medtr3g107810 Medicago truncatula HOM05D010359 ORTHO05D002252 1.6e-09 66.6 84 50.0
Lalb_Chr23g0265421 Lupinus albus HOM05D032364 ORTHO05D002252 2.1e-09 66.2 84 46.4
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.7e-09 65.9 94 42.6
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 2.7e-09 65.9 94 42.6
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 2.7e-09 65.9 136 41.9
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 2.7e-09 65.9 90 43.3
VMungo1127G0650 Vigna mungo HOM05D007556 ORTHO05D002252 3.5e-09 65.5 85 43.5
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 7.9e-09 64.3 97 41.2
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 1.8e-08 63.2 80 48.8
Phvul.011G046250 Phaseolus vulgaris HOM05D010359 ORTHO05D002252 1.8e-08 63.2 127 34.6
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 3.0e-08 62.4 140 34.3
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 3.9e-08 62.0 97 41.2
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 5.1e-08 61.6 92 40.2
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 1.1e-07 60.5 88 43.2
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.1e-07 60.5 100 40.0
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 1.5e-07 60.1 94 45.7
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.9e-07 59.7 94 45.7
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.9e-07 59.7 92 41.3
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 2.5e-07 59.3 117 36.8
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 3.3e-07 58.9 86 45.3
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 3.3e-07 58.9 64 46.9
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.3e-07 58.5 85 43.5
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 4.3e-07 58.5 86 39.5
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.3e-07 58.5 96 40.6
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 4.3e-07 58.5 100 40.0
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 5.7e-07 58.2 96 36.5
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 7.4e-07 57.8 92 39.1
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.3e-06 57.0 76 44.7
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 1.3e-06 57.0 84 40.5
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.3e-06 57.0 92 39.1
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 1.6e-06 56.6 78 46.2
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 1.6e-06 56.6 157 38.9
Phvul.009G024301 Phaseolus vulgaris HOM05D010359 ORTHO05D307948 2.8e-06 55.8 83 42.2
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.7e-06 55.5 85 40.0
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 6.3e-06 54.7 78 44.9
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 6.3e-06 54.7 83 43.4
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 8.2e-06 54.3 79 43.0
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 8.2e-06 54.3 85 41.2
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 8.2e-06 54.3 66 43.9
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 8.2e-06 54.3 82 37.8
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 8.2e-06 54.3 117 29.9


User provided reference genes

Program Settings