Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 4.3e-50 201.1 105 100.0
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 3.6e-36 154.8 89 86.5
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 5.7e-34 147.5 90 84.4
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 5.7e-34 147.5 90 84.4
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 1.2e-28 129.8 90 75.6
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 4.0e-27 124.8 90 75.6
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 4.0e-27 124.8 90 75.6
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 4.0e-27 124.8 89 71.9
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 3.1e-24 115.2 85 71.8
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 5.3e-24 114.4 85 65.9
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 2.7e-23 112.1 87 66.7
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 3.5e-23 111.7 83 68.7
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 3.5e-23 111.7 88 69.3
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.5e-23 111.3 87 70.1
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 5.9e-23 110.9 88 69.3
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 7.7e-23 110.5 84 71.4
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 7.7e-23 110.5 82 74.4
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 7.7e-23 110.5 82 74.4
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.0e-22 110.2 87 70.1
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 2.2e-22 109.0 100 63.0
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 2.9e-22 108.6 90 62.2
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 5.0e-22 107.8 90 66.7
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 5.0e-22 107.8 86 69.8
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 6.5e-22 107.5 81 67.9
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 8.5e-22 107.1 86 65.1
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.9e-21 105.9 99 60.6
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 1.9e-21 105.9 88 64.8
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.9e-21 105.9 89 67.4
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 2.5e-21 105.5 84 69.0
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 3.2e-21 105.1 87 66.7
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 3.2e-21 105.1 83 65.1
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 4.2e-21 104.8 89 65.2
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 4.2e-21 104.8 89 65.2
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 5.5e-21 104.4 98 62.2
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 5.5e-21 104.4 60 83.3
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 7.2e-21 104.0 94 62.8
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 9.4e-21 103.6 83 65.1
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 9.4e-21 103.6 92 60.9
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 9.4e-21 103.6 92 60.9
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 9.4e-21 103.6 94 61.7
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 9.4e-21 103.6 75 70.7
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.2e-20 103.2 89 69.7
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.2e-20 103.2 82 65.9
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 1.2e-20 103.2 91 62.6
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.2e-20 103.2 89 60.7
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 1.6e-20 102.8 56 85.7
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.1e-20 102.4 83 67.5
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 2.1e-20 102.4 81 65.4
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 2.7e-20 102.1 96 59.4
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 2.7e-20 102.1 87 65.5
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.6e-20 101.7 83 65.1
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 3.6e-20 101.7 92 59.8
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 4.7e-20 101.3 93 63.4
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 6.1e-20 100.9 55 85.5
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 8.0e-20 100.5 91 60.4
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.4e-19 99.8 92 58.7
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 1.4e-19 99.8 98 58.2
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 1.8e-19 99.4 91 60.4
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 2.3e-19 99.0 94 58.5
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.3e-19 99.0 92 57.6
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 3.0e-19 98.6 94 57.4
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 3.0e-19 98.6 91 60.4
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 3.0e-19 98.6 94 57.4
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 3.0e-19 98.6 94 57.4
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 3.0e-19 98.6 91 60.4
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 4.0e-19 98.2 94 58.5
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 5.2e-19 97.8 98 57.1
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 5.2e-19 97.8 91 60.4
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 5.2e-19 97.8 84 61.9
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 8.8e-19 97.1 93 57.0
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 8.8e-19 97.1 69 68.1
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 1.2e-18 96.7 95 57.9
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 1.2e-18 96.7 92 58.7
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.2e-18 96.7 92 58.7
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 1.5e-18 96.3 98 59.2
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 2.0e-18 95.9 55 80.0
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 3.4e-18 95.1 70 67.1
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 3.4e-18 95.1 84 61.9
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 1.3e-17 93.2 92 57.6
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.3e-17 93.2 54 77.8
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 6.3e-17 90.9 55 76.4
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 8.3e-17 90.5 55 74.5
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.1e-16 90.1 94 51.1
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.1e-16 90.1 94 51.1
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 2.4e-16 89.0 78 61.5
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 3.1e-16 88.6 89 57.3
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 7.0e-16 87.4 76 63.2
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 2.7e-15 85.5 75 62.7
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.0e-14 83.6 70 64.3
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.7e-14 82.8 48 83.3
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 2.9e-14 82.0 74 60.8
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 6.5e-14 80.9 83 56.6
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 6.5e-14 80.9 76 57.9
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 6.5e-14 80.9 76 57.9
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 2.5e-13 79.0 71 62.0
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 3.2e-13 78.6 75 58.7
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 5.5e-13 77.8 79 54.4
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 5.5e-13 77.8 50 78.0
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.2e-12 76.6 44 84.1
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 2.1e-12 75.9 74 56.8
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 2.7e-12 75.5 75 58.7
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 4.7e-12 74.7 69 62.3
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 1.0e-11 73.6 50 78.0
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 8.8e-11 70.5 79 54.4
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 8.8e-11 70.5 90 48.9
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.5e-10 69.7 73 54.8
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 1.5e-10 69.7 79 53.2
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 4.4e-10 68.2 77 50.6
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 4.4e-10 68.2 53 62.3
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 5.9e-07 57.8 39 76.9
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 5.9e-07 57.8 39 76.9


User provided reference genes

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