Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 2.9e-126 455.3 236 100.0
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 5.7e-34 148.7 75 94.7
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 9.8e-34 147.9 76 93.4
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 1.3e-33 147.5 76 93.4
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 2.2e-33 146.7 76 92.1
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 1.4e-32 144.1 76 89.5
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 2.4e-32 143.3 76 89.5
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 3.2e-32 142.9 76 86.8
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 3.2e-32 142.9 75 89.3
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 4.1e-32 142.5 76 88.2
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 4.1e-32 142.5 76 88.2
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 4.1e-32 142.5 76 89.5
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 4.1e-32 142.5 76 86.8
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 5.4e-32 142.1 76 89.5
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 5.4e-32 142.1 76 88.2
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 5.4e-32 142.1 76 85.5
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 5.4e-32 142.1 76 86.8
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 7.0e-32 141.7 76 86.8
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 2.7e-31 139.8 76 84.2
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 4.6e-31 139.0 76 86.8
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 4.6e-31 139.0 76 85.5
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 7.8e-31 138.3 76 86.8
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 1.0e-30 137.9 76 85.5
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.7e-30 137.1 76 84.2
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 2.3e-30 136.7 76 80.3
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 2.3e-30 136.7 76 80.3
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 3.9e-30 136.0 75 84.0
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 5.0e-30 135.6 76 82.9
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 5.0e-30 135.6 75 82.7
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 6.6e-30 135.2 81 77.8
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 8.6e-30 134.8 81 75.3
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 8.6e-30 134.8 76 81.6
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 1.9e-29 133.7 76 78.9
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 1.9e-29 133.7 76 85.5
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 2.5e-29 133.3 70 88.6
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 3.3e-29 132.9 76 81.6
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 7.3e-29 131.7 75 80.0
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 1.6e-28 130.6 70 87.1
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 1.6e-28 130.6 76 76.3
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 8.0e-28 128.3 93 72.0
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 1.4e-27 127.5 70 80.0
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 3.1e-27 126.3 70 84.3
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 3.1e-27 126.3 73 79.5
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 3.1e-27 126.3 70 80.0
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 3.1e-27 126.3 76 78.9
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 4.0e-27 125.9 69 85.5
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 5.2e-27 125.6 75 77.3
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 5.2e-27 125.6 75 77.3
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 5.2e-27 125.6 69 79.7
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 5.2e-27 125.6 73 76.7
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 6.8e-27 125.2 69 82.6
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 1.5e-26 124.0 75 77.3
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 2.6e-26 123.2 70 82.9
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 5.8e-26 122.1 69 78.3
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 1.3e-25 120.9 73 78.1
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 3.7e-25 119.4 69 78.3
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 3.2e-24 116.3 67 83.6
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 5.4e-24 115.5 64 82.8
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 7.0e-24 115.2 76 72.4
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 2.0e-23 113.6 73 74.0
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 2.7e-23 113.2 70 80.0
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 3.0e-22 109.8 158 37.3
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 3.9e-22 109.4 158 41.1
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 8.6e-22 108.2 73 65.8
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 7.3e-21 105.1 61 77.0
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 2.8e-20 103.2 124 46.8
Psat5g226040 Pisum sativum HOM05D000002 ORTHO05D030156 3.1e-19 99.8 77 74.0
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 6.8e-19 98.6 61 72.1
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 1.2e-18 97.8 57 78.9
ECA233G4785 Erigeron canadensis HOM05D007618 ORTHO05D009606 1.5e-18 97.4 60 75.0
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 3.4e-18 96.3 54 79.6
FAN24G0716 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.3e-17 94.4 52 84.6
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 1.7e-17 94.0 52 78.8
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 1.4e-16 90.9 60 73.3
Oeu006123.1 Olea europaea HOM05D007618 ORTHO05D009606 4.1e-16 89.4 52 75.0
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 4.1e-16 89.4 45 91.1
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 1.6e-15 87.4 45 88.9
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 2.3e-14 83.6 79 57.0
Atru.chr5.3531 Acer truncatum HOM05D007618 ORTHO05D009606 3.0e-14 83.2 45 84.4
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 5.6e-13 79.0 44 84.1
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 1.6e-12 77.4 69 55.1
Nn1g00573 Nelumbo nucifera HOM05D007618 ORTHO05D009606 6.8e-11 72.0 42 76.2
Psat1g047720 Pisum sativum HOM05D000002 ORTHO05D000001 6.8e-11 72.0 129 45.0
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 3.4e-10 69.7 69 40.6
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 4.4e-10 69.3 69 42.0
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 8.4e-09 65.1 97 34.0
TPR.G32556 Trifolium pratense HOM05D000002 ORTHO05D000001 1.1e-08 64.7 83 45.8
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 5.4e-08 62.4 39 69.2
Cre03.g200000 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 9.2e-08 61.6 70 38.6
TPR.G25216 Trifolium pratense HOM05D000319 ORTHO05D000001 2.7e-07 60.1 82 47.6
Psat1g005760 Pisum sativum HOM05D000002 ORTHO05D000001 4.6e-07 59.3 109 37.6
TPR.G12295 Trifolium pratense HOM05D000002 ORTHO05D000001 1.3e-06 57.8 75 46.7
TPR.G33758 Trifolium pratense HOM05D001505 ORTHO05D000001 1.3e-06 57.8 74 48.6


User provided reference genes

Program Settings