Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g206720 Pisum sativum HOM05D008547 ORTHO05D010515 9.5e-158 560.1 271 100.0
Ca_23530_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.7e-66 256.9 258 52.3
Medtr5g009560 Medicago truncatula HOM05D008547 ORTHO05D010515 1.9e-65 253.4 254 55.5
Medtr8g027525 Medicago truncatula HOM05D008547 ORTHO05D010515 1.2e-64 250.8 241 55.2
TPR.G16819 Trifolium pratense HOM05D008547 ORTHO05D010515 1.4e-63 247.3 247 57.5
Medtr1g102770 Medicago truncatula HOM05D008547 ORTHO05D010515 4.4e-62 242.3 231 55.4
TPR.G26111 Trifolium pratense HOM05D008547 ORTHO05D010515 9.8e-62 241.1 257 53.3
Medtr8g027595 Medicago truncatula HOM05D008547 ORTHO05D010515 1.1e-60 237.7 251 55.0
Medtr5g090860 Medicago truncatula HOM05D008547 ORTHO05D010515 9.1e-60 234.6 243 53.5
TPR.G16823 Trifolium pratense HOM05D008547 ORTHO05D010515 1.0e-58 231.1 262 52.3
Psat4g161600 Pisum sativum HOM05D008547 ORTHO05D010515 5.0e-58 228.8 268 49.3
TPR.G39730 Trifolium pratense HOM05D008547 ORTHO05D010515 9.5e-57 224.6 246 51.6
TPR.G8333 Trifolium pratense HOM05D008547 ORTHO05D010515 1.3e-53 214.2 254 46.9
TPR.G12161 Trifolium pratense HOM05D008547 ORTHO05D010515 2.3e-50 203.4 248 51.6
Psat4g187360 Pisum sativum HOM05D008547 ORTHO05D010515 3.8e-50 202.6 248 47.6
TPR.G32061 Trifolium pratense HOM05D008547 ORTHO05D010515 1.9e-49 200.3 260 43.1
Ca_17126_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.4e-47 194.1 246 45.5
Medtr8g065650 Medicago truncatula HOM05D008547 ORTHO05D010515 1.2e-46 191.0 246 45.1
Psat4g161480 Pisum sativum HOM05D008547 ORTHO05D010515 2.6e-46 189.9 206 53.4
Ca_14816_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 3.4e-46 189.5 248 45.2
TPR.G27684 Trifolium pratense HOM05D008547 ORTHO05D010515 4.4e-46 189.1 221 47.5
Medtr5g090850 Medicago truncatula HOM05D008547 ORTHO05D010515 2.2e-45 186.8 240 47.9
Ca_15277_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.4e-44 184.1 247 44.1
Ca_15416_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 1.4e-44 184.1 247 44.1
Psat1g047400 Pisum sativum HOM05D008547 ORTHO05D010515 9.2e-44 181.4 257 42.4
TPR.G16818 Trifolium pratense HOM05D008547 ORTHO05D010515 6.4e-37 158.7 198 48.0
Medtr6g004080 Medicago truncatula HOM05D008547 ORTHO05D010515 9.2e-36 154.8 141 52.5
Medtr3g023820 Medicago truncatula HOM05D008547 ORTHO05D010515 1.2e-35 154.5 172 52.3
Medtr1g017800 Medicago truncatula HOM05D008547 ORTHO05D010515 6.6e-34 148.7 185 48.1
Medtr1g103170 Medicago truncatula HOM05D008547 ORTHO05D010515 5.2e-31 139.0 142 52.1
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 6.4e-29 132.1 250 38.8
TPR.G38872 Trifolium pratense HOM05D008547 ORTHO05D010515 1.9e-28 130.6 257 35.4
TPR.G21917 Trifolium pratense HOM05D008547 ORTHO05D010515 3.2e-28 129.8 113 54.9
Medtr5g012050 Medicago truncatula HOM05D008547 ORTHO05D010515 5.4e-28 129.0 130 48.5
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 1.2e-27 127.9 250 37.6
TPR.G23739 Trifolium pratense HOM05D008547 ORTHO05D010515 8.1e-24 115.2 94 56.4
Lj2g0004475 Lotus japonicus HOM05D008547 ORTHO05D010515 8.9e-23 111.7 249 33.7
Medtr5g013160 Medicago truncatula HOM05D008547 ORTHO05D010515 9.9e-22 108.2 113 53.1
Medtr8g027530 Medicago truncatula HOM05D008547 ORTHO05D010515 3.0e-18 96.7 115 53.9
TPR.G20414 Trifolium pratense HOM05D008547 ORTHO05D010515 3.3e-17 93.2 121 49.6
TPR.G7989 Trifolium pratense HOM05D008547 ORTHO05D010515 1.6e-16 90.9 96 58.3
TPR.G21157 Trifolium pratense HOM05D008547 ORTHO05D010515 2.0e-14 84.0 81 55.6
TPR.G9477 Trifolium pratense HOM05D008547 ORTHO05D010515 2.6e-14 83.6 66 68.2
Rhsim08G0071800 Rhododendron simsii HOM05D006664 ORTHO05D009007 1.1e-12 78.2 266 27.1
Lj6A793G95 Lonicera japonica HOM05D006664 ORTHO05D009007 6.0e-11 72.4 221 28.1
COL.COLO4_15201 Corchorus olitorius HOM05D008547 ORTHO05D010515 1.3e-10 71.2 165 30.9
Actinidia38558 Actinidia chinensis HOM05D006664 ORTHO05D009007 1.7e-10 70.9 260 26.5
SalBow1G5259 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.3e-09 66.2 264 25.4
TAR575G0001 Trochodendron aralioides HOM05D008437 ORTHO05D008819 5.6e-09 65.9 187 26.7
SalBow1G1867 Salvia bowleyana HOM05D006664 ORTHO05D009007 9.6e-09 65.1 264 25.4
Actinidia23407 Actinidia chinensis HOM05D006664 ORTHO05D009007 1.3e-08 64.7 249 24.9
Actinidia23408 Actinidia chinensis HOM05D006664 ORTHO05D009007 1.3e-08 64.7 249 24.9
Actinidia27246 Actinidia chinensis HOM05D006664 ORTHO05D009007 1.3e-08 64.7 249 24.9
Lj6A74G24 Lonicera japonica HOM05D006664 ORTHO05D009007 2.1e-08 63.9 229 25.8
CiPaw.05G236300 Carya illinoinensis HOM05D006664 ORTHO05D009007 2.8e-08 63.5 238 26.5
COL.COLO4_14611 Corchorus olitorius HOM05D008437 ORTHO05D010577 4.8e-08 62.8 245 25.3
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 4.8e-08 62.8 277 24.2
TAR629G0100 Trochodendron aralioides HOM05D008437 ORTHO05D008819 4.8e-08 62.8 187 25.7
Migut.A00778 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.8e-07 60.8 136 27.9
Nn1g09443 Nelumbo nucifera HOM05D007726 ORTHO05D008819 1.8e-07 60.8 156 29.5
CSS0044623 Camellia sinensis var. sinensis HOM05D008437 ORTHO05D010577 5.3e-07 59.3 241 25.3
Migut.D00751 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.3e-07 59.3 232 26.3
CiPaw.02G099600 Carya illinoinensis HOM05D006664 ORTHO05D009007 9.0e-07 58.5 196 28.6
Migut.A00481 Erythranthe guttata HOM05D006664 ORTHO05D009007 9.0e-07 58.5 182 25.3
SalBow1G3386 Salvia bowleyana HOM05D006664 ORTHO05D009007 9.0e-07 58.5 247 23.1
Solyc09g012010.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 2.6e-06 57.0 198 26.3
Migut.A00618 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.8e-06 55.8 240 22.9
Migut.A00604 Erythranthe guttata HOM05D006664 ORTHO05D009007 9.9e-06 55.1 231 23.8
Sopen05g009680 Solanum pennellii HOM05D008437 ORTHO05D010577 9.9e-06 55.1 130 29.2
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 9.9e-06 55.1 187 24.6


User provided reference genes

Program Settings