Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g205720 Pisum sativum HOM05D015613 ORTHO05D011265 6.7e-43 176.8 80 100.0
Psat4g221680 Pisum sativum HOM05D002484 ORTHO05D002541 3.5e-15 84.7 78 51.3
Psat4g205640 Pisum sativum HOM05D002484 ORTHO05D002541 8.5e-14 80.1 77 51.9
Medtr3g020340 Medicago truncatula HOM05D002484 ORTHO05D002541 3.6e-12 74.7 78 46.2
Medtr8g012775 Medicago truncatula HOM05D002484 ORTHO05D002541 4.7e-12 74.3 80 48.8
TPR.G11184 Trifolium pratense HOM05D002484 ORTHO05D002541 1.0e-11 73.2 79 48.1
Medtr8g012795 Medicago truncatula HOM05D002484 ORTHO05D002541 1.4e-11 72.8 80 46.2
Medtr8g056870 Medicago truncatula HOM05D002484 ORTHO05D002541 1.4e-11 72.8 81 51.9
TPR.G11190 Trifolium pratense HOM05D002484 ORTHO05D002541 4.0e-11 71.2 67 49.3
Psat4g203560 Pisum sativum HOM05D002484 ORTHO05D002541 2.0e-10 68.9 81 40.7
TPR.G16448 Trifolium pratense HOM05D002484 ORTHO05D002541 2.0e-10 68.9 83 50.6
Medtr7g095970 Medicago truncatula HOM05D002484 ORTHO05D002541 5.7e-10 67.4 81 49.4
Psat4g203600 Pisum sativum HOM05D002484 ORTHO05D002541 1.3e-09 66.2 80 47.5
Medtr8g012835 Medicago truncatula HOM05D002484 ORTHO05D002541 2.2e-09 65.5 80 41.2
Medtr8g012890 Medicago truncatula HOM05D002484 ORTHO05D002541 2.2e-09 65.5 80 43.8
Lj3g0015575 Lotus japonicus HOM05D002484 ORTHO05D002541 1.4e-08 62.8 77 40.3
Medtr8g012760 Medicago truncatula HOM05D002484 ORTHO05D002541 1.4e-08 62.8 68 42.6
Solyc07g009230.3 Solanum lycopersicum HOM05D015613 ORTHO05D011265 1.8e-08 62.4 71 40.8
Sopen07g017220 Solanum pennellii HOM05D015613 ORTHO05D011265 1.8e-08 62.4 71 40.8
PGSC0003DMG400024205 Solanum tuberosum HOM05D015613 ORTHO05D011265 1.8e-08 62.4 71 40.8
Medtr8g023090 Medicago truncatula HOM05D002484 ORTHO05D002541 2.4e-08 62.0 78 41.0
Medtr8g056890 Medicago truncatula HOM05D002484 ORTHO05D002541 3.1e-08 61.6 80 48.8
TPR.G17112 Trifolium pratense HOM05D002484 ORTHO05D002541 5.3e-08 60.8 68 44.1
Medtr8g012885 Medicago truncatula HOM05D002484 ORTHO05D002541 7.0e-08 60.5 81 44.4
Medtr8g012705 Medicago truncatula HOM05D002484 ORTHO05D002541 1.2e-07 59.7 76 43.4
Peaxi162Scf00069g00313 Petunia axillaris HOM05D015613 ORTHO05D011265 1.2e-07 59.7 64 40.6
TPR.G20187 Trifolium pratense HOM05D002484 ORTHO05D002541 2.0e-07 58.9 78 42.3
Atru.chr13.431 Acer truncatum HOM05D002484 ORTHO05D002541 2.7e-07 58.5 71 39.4
Nitab4.5_0000023g0290 Nicotiana tabacum HOM05D002484 ORTHO05D002541 3.5e-07 58.2 71 40.8
CARHR247530 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.9e-07 57.4 65 43.1
Duzib248G1325 Durio zibethinus HOM05D001795 ORTHO05D002541 1.3e-06 56.2 58 41.4
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 1.3e-06 56.2 70 40.0
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 1.7e-06 55.8 74 39.2
Atru.chr5.3054 Acer truncatum HOM05D002484 ORTHO05D002541 2.2e-06 55.5 77 35.1
A05p26930 Brassica napus HOM05D002484 ORTHO05D002541 2.2e-06 55.5 53 43.4
C01p00390 Brassica napus HOM05D002484 ORTHO05D002541 2.2e-06 55.5 53 43.4
BraA05t21573Z Brassica rapa HOM05D002484 ORTHO05D002541 2.2e-06 55.5 53 43.4
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 2.2e-06 55.5 75 37.3
Migut.N00483 Erythranthe guttata HOM05D002484 ORTHO05D002541 2.2e-06 55.5 76 38.2
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 2.2e-06 55.5 68 35.3
Psat1g080880 Pisum sativum HOM05D018786 ORTHO05D002541 2.9e-06 55.1 73 28.8
Atru.chr5.3052 Acer truncatum HOM05D002484 ORTHO05D002541 3.8e-06 54.7 77 39.0
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 3.8e-06 54.7 77 37.7
AL1G32330 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 5.0e-06 54.3 75 42.7
Ciclev10030125m.g Citrus clementina HOM05D002484 ORTHO05D002541 5.0e-06 54.3 75 38.7
Prupe.1G376000 Prunus persica HOM05D002484 ORTHO05D002541 5.0e-06 54.3 53 45.3
PGR031G2841 Punica granatum HOM05D002484 ORTHO05D002541 5.0e-06 54.3 78 37.2
Peaxi162Scf00324g00717 Petunia axillaris HOM05D002484 ORTHO05D002541 6.5e-06 53.9 52 44.2
Medtr4g116060 Medicago truncatula HOM05D002484 ORTHO05D258460 8.5e-06 53.5 79 43.0


User provided reference genes

Program Settings