Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 1.6e-103 379.8 240 100.0
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.9e-57 226.1 211 64.5
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 8.4e-57 224.6 211 64.0
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.0e-54 217.6 211 62.6
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 3.3e-53 212.6 205 62.4
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 1.1e-45 187.6 222 51.4
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 3.9e-38 162.5 206 50.5
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 7.4e-37 158.3 216 47.2
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 7.4e-37 158.3 211 49.8
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.6e-36 157.1 212 49.5
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 3.7e-36 156.0 212 49.5
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 6.9e-35 151.8 206 49.0
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 4.5e-34 149.1 206 48.1
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 5.8e-34 148.7 223 45.3
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 7.6e-34 148.3 99 75.8
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 7.6e-34 148.3 204 49.0
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 1.7e-33 147.1 221 45.2
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 6.5e-33 145.2 210 47.1
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 4.2e-32 142.5 216 43.5
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 6.0e-31 138.7 198 42.4
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 1.3e-30 137.5 185 45.4
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 3.9e-30 136.0 203 43.8
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 8.7e-30 134.8 160 48.1
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.1e-29 134.4 222 41.9
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.5e-29 134.0 178 46.6
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.9e-29 133.7 159 49.1
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 1.6e-28 130.6 224 39.3
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 2.2e-28 130.2 163 47.9
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 4.8e-28 129.0 222 41.0
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 8.2e-28 128.3 208 41.8
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.1e-27 127.9 205 39.0
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.1e-27 127.9 208 42.3
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.8e-27 127.1 200 41.5
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.8e-27 127.1 208 42.3
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 4.1e-27 125.9 225 41.3
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 4.1e-27 125.9 241 39.0
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 2.6e-26 123.2 216 38.0
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 2.6e-26 123.2 202 40.6
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 3.4e-26 122.9 213 40.4
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 3.4e-26 122.9 213 38.0
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 3.4e-26 122.9 205 42.4
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 5.9e-26 122.1 201 42.8
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.0e-25 121.3 167 44.3
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.3e-25 120.9 183 43.7
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.7e-25 120.6 226 38.9
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 2.9e-25 119.8 202 40.6
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 2.9e-25 119.8 217 39.6
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.9e-25 119.8 221 37.6
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 5.0e-25 119.0 214 39.7
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 5.0e-25 119.0 228 37.7
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 6.5e-25 118.6 231 37.7
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 6.5e-25 118.6 172 40.7
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 8.5e-25 118.2 217 39.6
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 8.5e-25 118.2 192 38.5
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 8.5e-25 118.2 159 43.4
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.1e-24 117.9 222 37.8
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.1e-24 117.9 199 39.7
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 1.4e-24 117.5 215 38.1
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.4e-24 117.5 211 38.9
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.9e-24 117.1 207 38.2
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 1.9e-24 117.1 222 37.8
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.9e-24 117.1 222 37.8
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.5e-24 116.7 169 41.4
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 3.2e-24 116.3 214 40.7
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 5.5e-24 115.5 194 38.7
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 7.2e-24 115.2 217 39.2
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 7.2e-24 115.2 202 40.6
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 9.3e-24 114.8 190 37.9
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 2.1e-23 113.6 184 41.3
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 2.1e-23 113.6 212 39.2
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 2.7e-23 113.2 202 35.6
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.6e-23 112.8 215 37.7
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.6e-23 112.8 211 37.4
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 4.6e-23 112.5 185 37.3
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 4.6e-23 112.5 217 37.8
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 4.6e-23 112.5 188 41.5
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 4.6e-23 112.5 177 40.1
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 4.6e-23 112.5 210 38.1
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 4.6e-23 112.5 209 38.8
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.8e-22 110.5 225 34.7
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 3.0e-22 109.8 212 38.7
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 5.1e-22 109.0 214 36.4
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 5.1e-22 109.0 173 41.0
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 5.1e-22 109.0 184 44.6
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 6.7e-22 108.6 218 37.2
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 8.7e-22 108.2 149 46.3
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 5.7e-21 105.5 178 41.6
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 9.7e-21 104.8 179 41.3
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 9.7e-21 104.8 184 37.5
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 1.7e-20 104.0 178 41.6
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 1.7e-20 104.0 178 41.0
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.7e-20 104.0 190 37.4
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 2.2e-20 103.6 176 42.6
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 2.2e-20 103.6 259 32.8
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.8e-20 103.2 240 35.0
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 3.7e-20 102.8 156 45.5
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 3.7e-20 102.8 155 43.9
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 4.8e-20 102.4 166 38.6
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 6.3e-20 102.1 146 44.5
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 6.3e-20 102.1 230 37.0
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 8.2e-20 101.7 169 37.9
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 1.4e-19 100.9 158 43.0
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 1.8e-19 100.5 179 41.9
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.8e-19 100.5 170 36.5
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 2.4e-19 100.1 156 40.4
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 6.9e-19 98.6 213 34.3
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 2.6e-18 96.7 211 33.2
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.5e-18 95.9 182 36.8
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 7.7e-18 95.1 165 40.0
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 8.8e-14 81.6 197 32.5
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 5.7e-13 79.0 158 38.6
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.8e-12 76.6 158 38.0
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 4.8e-12 75.9 87 43.7
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 4.1e-11 72.8 159 34.0
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 9.1e-11 71.6 167 31.7
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 1.2e-10 71.2 222 29.3
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 2.0e-10 70.5 181 28.7
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 2.0e-10 70.5 208 31.7
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 4.5e-10 69.3 118 41.5
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 8.5e-09 65.1 221 26.2
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 1.4e-08 64.3 173 29.5
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 7.2e-08 62.0 140 37.1
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 1.2e-07 61.2 132 35.6
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 4.7e-07 59.3 68 39.7


User provided reference genes

Program Settings