Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g099160 Pisum sativum HOM05D013666 ORTHO05D015141 1.4e-98 362.8 176 100.0
Psat3g132440 Pisum sativum HOM05D013666 ORTHO05D015141 3.0e-64 248.8 184 73.9
Psat0s4007g0160 Pisum sativum HOM05D013666 ORTHO05D015141 6.0e-44 181.4 173 60.1
Psat6g063400 Pisum sativum HOM05D013666 ORTHO05D015141 3.3e-42 175.6 172 62.2
Psat4g099240 Pisum sativum HOM05D013666 ORTHO05D015141 3.9e-35 152.1 71 95.8
Psat0s6670g0080 Pisum sativum HOM05D004351 ORTHO05D005196 8.6e-35 151.0 76 90.8
Psat0s4007g0200 Pisum sativum HOM05D002999 ORTHO05D003137 2.1e-33 146.4 77 90.9
Psat5g220200 Pisum sativum HOM05D013666 ORTHO05D015141 1.1e-32 144.1 70 94.3
Psat3g206040 Pisum sativum HOM05D013666 ORTHO05D015141 9.9e-23 110.9 104 62.5
Psat0s4007g0080 Pisum sativum HOM05D002999 ORTHO05D327315 4.2e-13 79.0 44 90.9
Psat4g099200 Pisum sativum HOM05D013666 ORTHO05D326501 4.3e-10 68.9 66 57.6
Psat3g197480 Pisum sativum HOM05D013666 ORTHO05D015141 9.6e-10 67.8 64 56.2
FAN20G3135 Fragaria x ananassa HOM05D001259 ORTHO05D001103 6.2e-09 65.1 46 73.9
FAN27G3341 Fragaria x ananassa HOM05D001259 ORTHO05D001103 6.2e-09 65.1 46 73.9
RcHm_v2.0_Chr6g0252261 Rosa chinensis HOM05D001259 ORTHO05D001103 6.2e-09 65.1 46 73.9
Prupe.8G164100 Prunus persica HOM05D001259 ORTHO05D001103 2.4e-08 63.2 51 64.7
FvH4_2g01340 Fragaria vesca HOM05D001259 ORTHO05D001103 3.1e-08 62.8 46 71.7
FAN24G0964 Fragaria x ananassa HOM05D001259 ORTHO05D001103 3.1e-08 62.8 46 71.7
Lj3g0013829 Lotus japonicus HOM05D001259 ORTHO05D001103 3.1e-08 62.8 46 73.9
Phvul.011G034800 Phaseolus vulgaris HOM05D001259 ORTHO05D001103 3.1e-08 62.8 46 73.9
Medtr4g073530 Medicago truncatula HOM05D001259 ORTHO05D001103 6.9e-08 61.6 46 71.7
Ca_19059_v3 Cicer arietinum L. HOM05D001259 ORTHO05D001103 9.0e-08 61.2 46 71.7
Glyma.12G031900 Glycine max HOM05D001259 ORTHO05D001103 9.0e-08 61.2 46 71.7
VMungo1127G0447 Vigna mungo HOM05D001259 ORTHO05D001103 1.2e-07 60.8 46 71.7
Psat0s4007g0040 Pisum sativum HOM05D011377 ORTHO05D325494 1.5e-07 60.5 37 86.5
Haze_02155 Corylus avellana HOM05D001259 ORTHO05D001103 2.0e-07 60.1 46 69.6
Os06g0717100 Oryza sativa ssp. japonica HOM05D001259 ORTHO05D001103 2.0e-07 60.1 46 67.4
Thecc.02G061700 Theobroma cacao HOM05D001259 ORTHO05D001103 2.0e-07 60.1 46 69.6
Dinv14094 Davidia involucrata HOM05D001259 ORTHO05D001103 2.6e-07 59.7 46 69.6
Manes.01G147700 Manihot esculenta HOM05D001259 ORTHO05D001103 2.6e-07 59.7 46 67.4
Psat7g137680 Pisum sativum HOM05D001259 ORTHO05D001103 2.6e-07 59.7 46 71.7
Cfa005229 Carpinus fangiana HOM05D001259 ORTHO05D001103 3.4e-07 59.3 46 67.4
Gohir.A12G037800 Gossypium hirsutum HOM05D001259 ORTHO05D001103 3.4e-07 59.3 46 69.6
Gohir.D12G034600 Gossypium hirsutum HOM05D001259 ORTHO05D001103 3.4e-07 59.3 46 69.6
Gorai.008G035600 Gossypium raimondii HOM05D001259 ORTHO05D001103 3.4e-07 59.3 46 69.6
Sabra04G0115900 Salix brachista HOM05D001259 ORTHO05D001103 3.4e-07 59.3 46 69.6
CSS0008740 Camellia sinensis var. sinensis HOM05D001259 ORTHO05D001103 4.5e-07 58.9 46 69.6
MD10G1123700 Malus domestica HOM05D001259 ORTHO05D001103 4.5e-07 58.9 51 64.7
QL11p049979 Quercus lobata HOM05D001259 ORTHO05D001103 4.5e-07 58.9 51 60.8
TPR.G39196 Trifolium pratense HOM05D001259 ORTHO05D001103 4.5e-07 58.9 46 67.4
COL.COLO4_17315 Corchorus olitorius HOM05D001259 ORTHO05D001103 5.8e-07 58.5 46 67.4
ECA233G3361 Erigeron canadensis HOM05D001259 ORTHO05D001103 5.8e-07 58.5 46 67.4
Lj2C479G9 Lonicera japonica HOM05D001259 ORTHO05D001103 5.8e-07 58.5 46 67.4
Glyma.11G106900 Glycine max HOM05D001259 ORTHO05D001103 7.6e-07 58.2 46 69.6
Psat0s10265g0080 Pisum sativum HOM05D013666 ORTHO05D015141 7.6e-07 58.2 38 73.7
TWI79G0975 Tripterygium wilfordii HOM05D001259 ORTHO05D001103 7.6e-07 58.2 46 67.4
EL10Ac9g21395 Beta vulgaris HOM05D001259 ORTHO05D001103 9.9e-07 57.8 46 65.2
CDE05G2810 Ceratophyllum demersum HOM05D001259 ORTHO05D001103 9.9e-07 57.8 46 65.2
Glyma.02G046700 Glycine max HOM05D001259 ORTHO05D001103 9.9e-07 57.8 46 65.2
Lj5A181T53 Lonicera japonica HOM05D001259 ORTHO05D001103 9.9e-07 57.8 46 65.2
CANSAT25G2159 Cannabis sativa HOM05D001259 ORTHO05D001103 1.3e-06 57.4 46 65.2
DCAR_010145 Daucus carota HOM05D001259 ORTHO05D001103 1.3e-06 57.4 46 67.4
Psat3g197320 Pisum sativum HOM05D011377 ORTHO05D325329 1.3e-06 57.4 31 93.5
Psat6g063560 Pisum sativum HOM05D011377 ORTHO05D324025 1.3e-06 57.4 31 93.5
Psat7g217480 Pisum sativum HOM05D011377 ORTHO05D319581 1.3e-06 57.4 31 93.5
Psat7g217520 Pisum sativum HOM05D011377 ORTHO05D321094 1.3e-06 57.4 31 93.5
TAR376G0393 Trochodendron aralioides HOM05D001259 ORTHO05D001103 1.3e-06 57.4 46 65.2
Atru.chr3.839 Acer truncatum HOM05D001259 ORTHO05D001103 1.7e-06 57.0 46 65.2
CiPaw.05G080700 Carya illinoinensis HOM05D001259 ORTHO05D001103 1.7e-06 57.0 46 63.0
Eucgr.I01404 Eucalyptus grandis HOM05D001259 ORTHO05D001103 1.7e-06 57.0 46 63.0
Psat2g075560 Pisum sativum HOM05D011377 ORTHO05D329058 1.7e-06 57.0 31 90.3
Actinidia22960 Actinidia chinensis HOM05D001259 ORTHO05D001103 2.2e-06 56.6 46 63.0
PSO541G5243 Papaver somniferum HOM05D001259 ORTHO05D001103 2.2e-06 56.6 51 58.8
Psat2g153480 Pisum sativum HOM05D001259 ORTHO05D001103 2.2e-06 56.6 46 63.0
Actinidia20507 Actinidia chinensis HOM05D001259 ORTHO05D001103 2.9e-06 56.2 46 67.4
CANSAT25G3287 Cannabis sativa HOM05D001259 ORTHO05D001103 2.9e-06 56.2 46 63.0
Cpa.g.sc37.152 Carica papaya HOM05D001259 ORTHO05D001103 2.9e-06 56.2 46 65.2
Ciclev10025594m.g Citrus clementina HOM05D001259 ORTHO05D001103 2.9e-06 56.2 46 63.0
Lalb_Chr03g0025101 Lupinus albus HOM05D001259 ORTHO05D001103 2.9e-06 56.2 46 67.4
arahy.Tifrunner.gnm1.ann1.8M9DZW Arachis hypogaea HOM05D001259 ORTHO05D001103 3.8e-06 55.8 46 65.2
arahy.Tifrunner.gnm1.ann1.FVW9RW Arachis hypogaea HOM05D001259 ORTHO05D001103 3.8e-06 55.8 46 65.2
Carub.0005s1762 Capsella rubella HOM05D001259 ORTHO05D001103 3.8e-06 55.8 46 63.0
HanXRQChr17g0557651 Helianthus annuus HOM05D001259 ORTHO05D001103 3.8e-06 55.8 46 63.0
MBI12_g17646_MAGBIO Magnolia biondii HOM05D001259 ORTHO05D001103 3.8e-06 55.8 46 60.9
Psat3g197360 Pisum sativum HOM05D011377 ORTHO05D325791 3.8e-06 55.8 31 90.3
Rhsim10G0210700 Rhododendron simsii HOM05D001259 ORTHO05D001103 3.8e-06 55.8 46 60.9
TPR.G10516 Trifolium pratense HOM05D001259 ORTHO05D001103 3.8e-06 55.8 46 60.9
Zm00001eb228160 Zea mays HOM05D001259 ORTHO05D001103 3.8e-06 55.8 45 62.2
Potri.004G174100 Populus trichocarpa HOM05D001259 ORTHO05D001103 4.9e-06 55.5 46 65.2
TWI53G0329 Tripterygium wilfordii HOM05D001259 ORTHO05D001103 4.9e-06 55.5 46 63.0
Actinidia00617 Actinidia chinensis HOM05D001259 ORTHO05D001103 6.4e-06 55.1 46 65.2
Ah.01g008530 Amaranthus hybridus HOM05D001259 ORTHO05D001103 6.4e-06 55.1 46 60.9
MSTRG.23400 Avicennia marina HOM05D001259 ORTHO05D001103 6.4e-06 55.1 51 58.8
CAN.G1485.1 Capsicum annuum HOM05D001259 ORTHO05D001103 6.4e-06 55.1 51 56.9
Lsat_1_v5_gn_3_46320 Lactuca sativa HOM05D001259 ORTHO05D001103 6.4e-06 55.1 46 65.2
Potri.009G133500 Populus trichocarpa HOM05D001259 ORTHO05D001103 6.4e-06 55.1 47 61.7
TAR381G0415 Trochodendron aralioides HOM05D001259 ORTHO05D001103 6.4e-06 55.1 46 60.9
AT3G51250 Arabidopsis thaliana HOM05D001259 ORTHO05D001103 8.4e-06 54.7 50 58.0
EL10Ac6g15492 Beta vulgaris HOM05D001259 ORTHO05D001103 8.4e-06 54.7 46 63.0
Duzib132G0120 Durio zibethinus HOM05D001259 ORTHO05D001103 8.4e-06 54.7 46 67.4
Nitab4.5_0022260g0010 Nicotiana tabacum HOM05D001259 ORTHO05D001103 8.4e-06 54.7 46 60.9
Peaxi162Scf00439g00527 Petunia axillaris HOM05D001259 ORTHO05D001103 8.4e-06 54.7 46 60.9


User provided reference genes

Program Settings