Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g070880 Pisum sativum HOM05D007612 ORTHO05D009468 6.3e-123 444.1 226 100.0
Medtr4g101420 Medicago truncatula HOM05D007612 ORTHO05D009468 7.1e-90 334.3 224 75.4
Lj4g0014551 Lotus japonicus HOM05D007612 ORTHO05D009468 4.9e-83 311.6 226 72.1
Phvul.003G218300 Phaseolus vulgaris HOM05D007612 ORTHO05D009468 2.3e-80 302.8 225 67.6
Glyma.05G056700 Glycine max HOM05D007612 ORTHO05D009468 9.6e-79 297.4 225 65.8
Glyma.17G139100 Glycine max HOM05D007612 ORTHO05D009468 1.1e-74 283.9 221 65.2
Lalb_Chr05g0225591 Lupinus albus HOM05D007612 ORTHO05D009468 1.5e-71 273.5 210 63.8
arahy.Tifrunner.gnm1.ann1.IY6VWR Arachis hypogaea HOM05D007612 ORTHO05D009468 3.3e-71 272.3 226 58.8
arahy.Tifrunner.gnm1.ann1.5P7LY9 Arachis hypogaea HOM05D007612 ORTHO05D009468 3.1e-69 265.8 226 58.0
TPR.G37688 Trifolium pratense HOM05D007612 ORTHO05D009468 3.2e-58 229.2 180 68.3
FAN08G1107 Fragaria x ananassa HOM05D007612 ORTHO05D009468 3.2e-42 176.0 217 47.5
FvH4_5g00170 Fragaria vesca HOM05D007612 ORTHO05D009468 7.9e-41 171.4 226 44.2
Hma1.2p1_0753F.1_g212875 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 3.9e-40 169.1 225 43.6
Cpa.g.sc29.136 Carica papaya HOM05D007612 ORTHO05D009468 6.7e-40 168.3 224 46.4
FAN18G2878 Fragaria x ananassa HOM05D007612 ORTHO05D009468 2.0e-39 166.8 226 43.8
Hma1.2p1_0753F.1_g212900 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 2.0e-39 166.8 225 43.6
FAN13G1385 Fragaria x ananassa HOM05D007612 ORTHO05D009468 2.5e-39 166.4 212 46.2
Rhsim03G0239900 Rhododendron simsii HOM05D007612 ORTHO05D009468 1.1e-37 161.0 226 43.4
Prupe.5G073800 Prunus persica HOM05D007612 ORTHO05D009468 1.8e-37 160.2 229 43.7
Cfa012762 Carpinus fangiana HOM05D007612 ORTHO05D009468 2.4e-37 159.8 207 47.8
CiPaw.12G107900 Carya illinoinensis HOM05D007612 ORTHO05D009468 2.4e-37 159.8 216 46.8
MD06G1062400 Malus domestica HOM05D007612 ORTHO05D009468 5.3e-37 158.7 207 45.4
MD04G1086000 Malus domestica HOM05D007612 ORTHO05D009468 2.0e-36 156.8 221 44.8
Manes.01G077500 Manihot esculenta HOM05D007612 ORTHO05D009468 7.7e-36 154.8 211 46.9
RcHm_v2.0_Chr7g0202701 Rosa chinensis HOM05D007612 ORTHO05D009468 7.7e-36 154.8 224 41.5
TWI81G0615 Tripterygium wilfordii HOM05D007612 ORTHO05D009468 1.0e-35 154.5 206 49.0
Atru.chr9.1343 Acer truncatum HOM05D007612 ORTHO05D009468 2.9e-35 152.9 218 45.4
Oeu026497.1 Olea europaea HOM05D007612 ORTHO05D009468 2.5e-34 149.8 232 41.8
Duzib205G1442 Durio zibethinus HOM05D007612 ORTHO05D009468 3.2e-34 149.4 217 41.5
Sc01g0009390 Simmondsia chinensis HOM05D007612 ORTHO05D009468 2.7e-33 146.4 209 45.9
CANSAT21G0050 Cannabis sativa HOM05D007612 ORTHO05D009468 3.6e-33 146.0 215 42.8
Lsat_1_v5_gn_6_2640 Lactuca sativa HOM05D007612 ORTHO05D009468 3.0e-32 142.9 219 43.4
Lj2C213T3 Lonicera japonica HOM05D007612 ORTHO05D009468 3.0e-32 142.9 203 42.9
QL12p013034 Quercus lobata HOM05D007612 ORTHO05D009468 2.6e-31 139.8 210 44.3
TAR375G1005 Trochodendron aralioides HOM05D007612 ORTHO05D009468 3.3e-31 139.4 223 43.0
DCAR_028126 Daucus carota HOM05D007612 ORTHO05D009468 4.4e-31 139.0 208 43.3
DCAR_004931 Daucus carota HOM05D007612 ORTHO05D009468 5.7e-31 138.7 209 44.0
SalBow1G3910 Salvia bowleyana HOM05D007612 ORTHO05D009468 5.7e-31 138.7 204 44.1
Ah.02g116870 Amaranthus hybridus HOM05D007612 ORTHO05D009468 7.4e-31 138.3 196 43.9
Potri.003G111700 Populus trichocarpa HOM05D007612 ORTHO05D009468 7.4e-31 138.3 209 41.6
PGR031G3722 Punica granatum HOM05D007612 ORTHO05D009468 3.7e-30 136.0 208 41.3
AT4G22550 Arabidopsis thaliana HOM05D007612 ORTHO05D009468 6.3e-30 135.2 207 41.5
MSTRG.1941 Avicennia marina HOM05D007612 ORTHO05D009468 8.2e-30 134.8 224 41.1
Migut.E01671 Erythranthe guttata HOM05D007612 ORTHO05D009468 8.2e-30 134.8 229 39.3
Carub.0007s1876 Capsella rubella HOM05D007612 ORTHO05D009468 1.4e-29 134.0 203 42.9
Thhalv10027572m.g Eutrema salsugineum HOM05D007612 ORTHO05D009468 1.4e-29 134.0 214 41.1
Thecc.03G255500 Theobroma cacao HOM05D007612 ORTHO05D009468 1.8e-29 133.7 208 40.4
unitig_26.g9270 Utricularia gibba HOM05D007612 ORTHO05D009468 7.0e-29 131.7 231 39.4
Ciclev10022424m.g Citrus clementina HOM05D007612 ORTHO05D009468 2.6e-28 129.8 215 40.0
CDE12G0540 Ceratophyllum demersum HOM05D001278 ORTHO05D009468 4.5e-28 129.0 211 41.2
HanXRQChr02g0049471 Helianthus annuus HOM05D007612 ORTHO05D009468 7.7e-28 128.3 207 41.5
THA.LOC104813682 Tarenaya hassleriana HOM05D007612 ORTHO05D009468 7.7e-28 128.3 209 40.7
Sopen08g027460 Solanum pennellii HOM05D007612 ORTHO05D009468 1.0e-27 127.9 217 41.0
Solyc08g078990.3 Solanum lycopersicum HOM05D007612 ORTHO05D009468 3.8e-27 125.9 212 41.0
Migut.E00853 Erythranthe guttata HOM05D007612 ORTHO05D009468 5.0e-27 125.6 229 38.0
Cc08_g12820 Coffea canephora HOM05D007612 ORTHO05D009468 8.5e-27 124.8 223 40.4
Nitab4.5_0000312g0380 Nicotiana tabacum HOM05D007612 ORTHO05D009468 1.2e-25 120.9 214 38.8
ATR0763G178 Amborella trichopoda HOM05D007612 ORTHO05D009468 1.6e-25 120.6 206 40.8
SHI20264 Sapria himalayana HOM05D007612 ORTHO05D009468 2.1e-25 120.2 197 41.1
CARHR229440 Cardamine hirsuta HOM05D007612 ORTHO05D009468 3.6e-25 119.4 136 48.5
BraA01t01329Z Brassica rapa HOM05D007612 ORTHO05D009468 8.0e-25 118.2 137 50.4
Dinv21611 Davidia involucrata HOM05D007612 ORTHO05D009468 1.4e-24 117.5 161 44.1
AL7G31050 Arabidopsis lyrata HOM05D007612 ORTHO05D009468 1.8e-24 117.1 214 37.9
CAN.G1217.8 Capsicum annuum HOM05D007612 ORTHO05D009468 4.0e-24 115.9 229 36.2
A01p13840 Brassica napus HOM05D007612 ORTHO05D009468 6.7e-24 115.2 137 49.6
Aa31LG9G10150 Aethionema arabicum HOM05D007612 ORTHO05D009468 1.1e-23 114.4 133 45.9
C01p16860 Brassica napus HOM05D007612 ORTHO05D009468 2.0e-23 113.6 136 50.0
BolC1t01627H Brassica oleracea HOM05D007612 ORTHO05D009468 2.0e-23 113.6 136 50.0
Os02g0661800 Oryza sativa ssp. japonica HOM05D007612 ORTHO05D009468 2.6e-23 113.2 199 39.2
SEGI_06780 Sequoiadendron giganteum HOM05D007612 ORTHO05D009468 2.6e-23 113.2 209 41.1
Sp7g20590 Schrenkiella parvula HOM05D007612 ORTHO05D009468 7.5e-23 111.7 133 49.6
Nitab4.5_0010169g0020 Nicotiana tabacum HOM05D007612 ORTHO05D009468 1.3e-22 110.9 203 38.9
SMO200G0174 Selaginella moellendorffii HOM05D007612 ORTHO05D009468 1.7e-22 110.5 210 40.0
Zm00001eb186700 Zea mays HOM05D007612 ORTHO05D009468 1.7e-22 110.5 220 37.3
EL10Ac5g13022 Beta vulgaris HOM05D007612 ORTHO05D009468 2.0e-20 103.6 161 38.5
Gohir.A12G219300 Gossypium hirsutum HOM05D007612 ORTHO05D009468 2.7e-20 103.2 217 35.0
Gorai.008G237400 Gossypium raimondii HOM05D007612 ORTHO05D009468 1.7e-19 100.5 198 33.8
BcaC09g51124 Brassica carinata HOM05D007612 ORTHO05D009468 2.2e-19 100.1 136 45.6
Pp3c11_1660 Physcomitrium patens HOM05D007612 ORTHO05D009468 2.9e-19 99.8 223 31.4
Mapoly0056s0139 Marchantia polymorpha HOM05D007612 ORTHO05D009468 5.0e-19 99.0 210 36.2
CBR_g29550 Chara braunii HOM05D007612 ORTHO05D009468 1.1e-18 97.8 207 34.3
AUR62007488 Chenopodium quinoa HOM05D007612 ORTHO05D009468 3.2e-18 96.3 110 46.4
SEGI_35634 Sequoiadendron giganteum HOM05D007612 ORTHO05D009468 4.2e-18 95.9 217 35.5
Pp3c22_3050 Physcomitrium patens HOM05D007612 ORTHO05D009468 5.5e-18 95.5 227 33.0
Hma1.2p1_0753F.1_g212890 Hydrangea macrophylla HOM05D007612 ORTHO05D009468 3.6e-17 92.8 111 47.7
SMO181G0010 Selaginella moellendorffii HOM05D007612 ORTHO05D009468 4.0e-16 89.4 208 35.6
Sabra03G0077400 Salix brachista HOM05D007612 ORTHO05D009468 2.6e-15 86.7 110 44.5
HPP92_022312 Vanilla planifolia HOM05D007612 ORTHO05D009468 4.4e-15 85.9 139 41.7
COL.COLO4_03562 Corchorus olitorius HOM05D007612 ORTHO05D009468 1.8e-13 80.5 110 40.9
Pp3c2_32240 Physcomitrium patens HOM05D007612 ORTHO05D009468 4.1e-13 79.3 148 32.4
PRCOL_00000794 Prasinoderma coloniale HOM05D007612 ORTHO05D009468 1.6e-12 77.4 205 32.7
PGSC0003DMG400004745 Solanum tuberosum HOM05D007612 ORTHO05D009468 2.9e-11 73.2 107 43.0
C03p84250 Brassica napus HOM05D007612 ORTHO05D009468 4.2e-10 69.3 107 43.9
BolC3t20707H Brassica oleracea HOM05D007612 ORTHO05D009468 2.2e-06 57.0 98 40.8
FAN05G2670 Fragaria x ananassa HOM05D007612 ORTHO05D009468 6.3e-06 55.5 60 45.0
Oeu007691.1 Olea europaea HOM05D007612 ORTHO05D009468 6.3e-06 55.5 135 36.3


User provided reference genes

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