Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g068800 Pisum sativum HOM05D004333 ORTHO05D036529 1.9e-47 192.2 97 100.0
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 7.3e-44 180.3 96 94.8
Psat2g097720 Pisum sativum HOM05D004333 ORTHO05D036529 1.1e-36 156.4 82 96.3
TPR.G21759 Trifolium pratense HOM05D000300 ORTHO05D000383 2.0e-25 119.0 84 73.8
Medtr2g047855 Medicago truncatula HOM05D000300 ORTHO05D000383 7.6e-17 90.5 79 60.8
Lj3g0027073 Lotus japonicus HOM05D000300 ORTHO05D000383 1.1e-15 86.7 79 53.2
Lj3g0005372 Lotus japonicus HOM05D000300 ORTHO05D000383 7.9e-14 80.5 79 49.4
Lalb_Chr03g0029391 Lupinus albus HOM05D000300 ORTHO05D036529 2.3e-13 79.0 81 49.4
Lj3g0008346 Lotus japonicus HOM05D000300 ORTHO05D000383 1.5e-12 76.3 79 49.4
arahy.Tifrunner.gnm1.ann1.QWVG1Y Arachis hypogaea HOM05D000300 ORTHO05D000383 3.3e-12 75.1 79 48.1
arahy.Tifrunner.gnm1.ann1.YT9B61 Arachis hypogaea HOM05D000300 ORTHO05D000383 1.1e-10 70.1 79 46.8
arahy.Tifrunner.gnm1.ann1.N35TLR Arachis hypogaea HOM05D000300 ORTHO05D000383 3.1e-10 68.6 79 45.6
Lj3g0023422 Lotus japonicus HOM05D000300 ORTHO05D000383 6.9e-10 67.4 79 45.6
Medtr2g090290 Medicago truncatula HOM05D000300 ORTHO05D000383 9.0e-10 67.0 79 45.6
TPR.G6420 Trifolium pratense HOM05D000300 ORTHO05D000383 1.2e-09 66.6 68 45.6
Psat5g271360 Pisum sativum HOM05D000300 ORTHO05D000383 1.5e-09 66.2 81 45.7
Medtr8g465890 Medicago truncatula HOM05D000300 ORTHO05D000383 3.4e-09 65.1 79 46.8
Lalb_Chr14g0366861 Lupinus albus HOM05D000300 ORTHO05D000383 4.5e-09 64.7 82 46.3
VMungo1080G1438 Vigna mungo HOM05D000300 ORTHO05D000383 7.6e-09 63.9 81 42.0
CANSAT78G0733 Cannabis sativa HOM05D000300 ORTHO05D000383 1.3e-08 63.2 84 40.5
Phvul.005G104300 Phaseolus vulgaris HOM05D000300 ORTHO05D000383 2.9e-08 62.0 79 43.0
arahy.Tifrunner.gnm1.ann1.QZ522N Arachis hypogaea HOM05D000300 ORTHO05D000383 5.0e-08 61.2 61 49.2
Ca_01505_v3 Cicer arietinum L. HOM05D000300 ORTHO05D000383 5.0e-08 61.2 79 40.5
CSS0026918 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 6.5e-08 60.8 66 43.9
Prupe.3G136900 Prunus persica HOM05D000300 ORTHO05D000383 6.5e-08 60.8 64 48.4
arahy.Tifrunner.gnm1.ann1.CVI481 Arachis hypogaea HOM05D000300 ORTHO05D000383 1.4e-07 59.7 61 47.5
Actinidia05627 Actinidia chinensis HOM05D000300 ORTHO05D000383 1.9e-07 59.3 76 43.4
Lj1A724G17 Lonicera japonica HOM05D000300 ORTHO05D000383 2.5e-07 58.9 66 48.5
arahy.Tifrunner.gnm1.ann1.1YDA7U Arachis hypogaea HOM05D000300 ORTHO05D000383 3.2e-07 58.5 61 47.5
arahy.Tifrunner.gnm1.ann1.26I04M Arachis hypogaea HOM05D000300 ORTHO05D000383 4.2e-07 58.2 61 47.5
Glyma.12G203800 Glycine max HOM05D000300 ORTHO05D000383 4.2e-07 58.2 80 41.2
arahy.Tifrunner.gnm1.ann1.U03QDK Arachis hypogaea HOM05D000300 ORTHO05D000383 9.3e-07 57.0 65 43.1
SGA_v2.0_scaffold153G36936 Striga asiatica HOM05D000300 ORTHO05D000383 9.3e-07 57.0 64 45.3
Lj1A1206T68 Lonicera japonica HOM05D000300 ORTHO05D000383 2.1e-06 55.8 80 37.5
Dinv23647 Davidia involucrata HOM05D000300 ORTHO05D000383 2.7e-06 55.5 80 41.2
Glyma.13G297800 Glycine max HOM05D000300 ORTHO05D000383 2.7e-06 55.5 61 44.3
arahy.Tifrunner.gnm1.ann1.H99X8T Arachis hypogaea HOM05D000300 ORTHO05D000383 4.6e-06 54.7 63 42.9
Hund10803 Selenicereus undatus HOM05D000300 ORTHO05D000383 4.6e-06 54.7 65 43.1
AUR62039736 Chenopodium quinoa HOM05D000300 ORTHO05D000383 6.1e-06 54.3 71 35.2
COL.COLO4_29446 Corchorus olitorius HOM05D000300 ORTHO05D000383 6.1e-06 54.3 66 40.9


User provided reference genes

Program Settings