Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 5.1e-70 267.7 142 100.0
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 6.5e-49 197.6 146 78.1
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 4.4e-45 184.9 139 74.8
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 1.4e-40 169.9 142 68.3
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 3.3e-37 158.7 139 64.0
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 2.2e-36 156.0 140 65.0
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 9.1e-35 150.6 136 64.7
VMungo1215G2054 Vigna mungo HOM05D013104 ORTHO05D010857 3.1e-27 125.6 125 61.6
Lalb_Chr12g0201261 Lupinus albus HOM05D013104 ORTHO05D010857 1.6e-26 123.2 146 54.8
arahy.Tifrunner.gnm1.ann1.ABZM2I Arachis hypogaea HOM05D013104 ORTHO05D010857 4.5e-26 121.7 152 54.6
Lalb_Chr07g0182451 Lupinus albus HOM05D013104 ORTHO05D010857 2.8e-20 102.4 143 46.2
arahy.Tifrunner.gnm1.ann1.984SQ9 Arachis hypogaea HOM05D013104 ORTHO05D010857 1.1e-19 100.5 139 50.4
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 3.1e-11 72.4 136 38.2
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 9.2e-11 70.9 139 36.7
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.9e-09 65.9 135 43.7
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.1e-08 63.9 132 37.9
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 2.5e-08 62.8 132 37.1
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 2.5e-08 62.8 134 37.3
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 4.3e-08 62.0 134 37.3
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 5.6e-08 61.6 131 36.6
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 5.6e-08 61.6 128 35.9
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 7.3e-08 61.2 130 34.6
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 2.1e-07 59.7 128 37.5
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 4.7e-07 58.5 132 37.1
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 3.0e-06 55.8 130 33.8


User provided reference genes

Program Settings