Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 5.5e-141 504.2 241 100.0
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 9.7e-130 466.8 241 91.7
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 4.0e-123 444.9 240 86.7
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 7.2e-117 424.1 238 83.6
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 2.7e-95 352.4 246 67.9
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 8.1e-92 340.9 245 65.3
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 1.1e-91 340.5 245 65.3
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 6.8e-91 337.8 248 65.3
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 2.2e-89 332.8 252 63.9
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 6.4e-89 331.3 231 68.4
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 3.2e-88 328.9 251 62.5
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 1.6e-87 326.6 257 61.1
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 1.4e-83 313.5 237 65.0
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 9.6e-69 264.2 242 53.7
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 1.8e-67 260.0 230 53.5
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 2.4e-67 259.6 244 52.0
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 7.6e-66 254.6 243 49.4
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 6.4e-65 251.5 236 50.0
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 6.4e-65 251.5 235 50.6
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 2.7e-63 246.1 242 50.8
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 3.5e-63 245.7 256 49.2
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 4.6e-63 245.4 243 49.4
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 7.9e-63 244.6 251 48.6
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 1.0e-62 244.2 255 47.1
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 1.0e-62 244.2 236 48.7
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 2.3e-62 243.0 226 51.3
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 6.6e-62 241.5 236 48.3
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 8.7e-62 241.1 226 52.7
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 2.5e-61 239.6 225 51.6
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.6e-60 235.7 238 46.2
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 8.1e-60 234.6 245 45.7
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.1e-59 234.2 239 50.6
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.1e-59 234.2 244 49.2
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 2.4e-59 233.0 244 48.0
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 4.0e-59 232.3 241 49.4
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 6.9e-59 231.5 250 45.2
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 9.0e-59 231.1 237 50.6
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 9.0e-59 231.1 230 49.1
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 1.2e-58 230.7 239 49.0
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.2e-58 230.7 231 48.9
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.2e-58 230.7 235 48.9
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 2.6e-58 229.6 250 46.0
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 3.4e-58 229.2 238 45.8
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 5.8e-58 228.4 234 48.7
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 5.8e-58 228.4 244 46.3
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 5.8e-58 228.4 252 44.4
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 7.6e-58 228.0 244 46.7
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 9.9e-58 227.6 238 49.2
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.3e-57 227.3 227 48.9
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 1.3e-57 227.3 252 46.0
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 1.3e-57 227.3 259 44.0
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 2.2e-57 226.5 244 47.1
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.9e-57 226.1 242 45.9
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 5.5e-56 221.9 229 44.1
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 7.1e-56 221.5 236 47.0
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 7.1e-56 221.5 242 47.1
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 9.3e-56 221.1 256 43.4
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 2.1e-55 219.9 234 48.3
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 2.1e-55 219.9 220 47.3
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 3.3e-53 212.6 235 46.8
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.3e-52 210.7 251 43.0
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 2.8e-52 209.5 240 45.0
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.4e-51 207.2 240 47.5
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 5.3e-51 205.3 221 45.2
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 3.4e-50 202.6 252 41.7
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.0e-49 201.1 228 46.1
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 1.3e-49 200.7 237 42.6
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 3.8e-49 199.1 230 44.8
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 4.9e-49 198.7 237 46.0
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 4.9e-49 198.7 237 45.6
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 8.4e-49 198.0 234 44.9
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 8.4e-49 198.0 236 43.2
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 1.1e-48 197.6 230 46.1
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 1.1e-48 197.6 230 46.1
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 1.4e-48 197.2 234 44.9
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.5e-48 196.4 222 44.6
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.2e-47 194.1 222 44.1
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 3.5e-47 192.6 230 45.7
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 3.5e-47 192.6 230 45.7
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 4.6e-47 192.2 229 45.9
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 7.9e-47 191.4 236 44.5
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 2.3e-46 189.9 246 39.4
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 3.0e-46 189.5 246 39.4
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 6.7e-46 188.3 222 43.2
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 7.4e-45 184.9 245 41.2
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.6e-44 183.7 226 46.0
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.1e-44 183.3 174 47.1
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 2.1e-44 183.3 173 50.3
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 6.9e-43 178.3 189 47.1
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.5e-42 177.2 240 40.0
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 4.5e-42 175.6 157 55.4
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 1.7e-41 173.7 174 48.9
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 1.6e-39 167.2 264 34.5
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.7e-39 166.4 227 40.1
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 7.9e-39 164.9 264 36.0
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 1.9e-37 160.2 230 36.5
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 2.5e-37 159.8 224 38.8
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 1.2e-34 151.0 232 33.2
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 5.9e-34 148.7 247 36.8
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 5.9e-34 148.7 158 46.8
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 2.1e-31 140.2 298 31.2
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 3.6e-31 139.4 159 46.5
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 3.6e-31 139.4 159 45.9
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 3.6e-31 139.4 157 42.7
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.5e-29 134.0 296 30.7
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 1.4e-27 127.5 154 41.6
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 1.8e-27 127.1 151 43.7
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 3.0e-22 109.8 345 23.8
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.8e-19 100.5 86 54.7
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 7.7e-18 95.1 85 52.9
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 3.8e-17 92.8 87 49.4
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 3.2e-16 89.7 110 43.6
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 3.2e-16 89.7 142 40.1
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.2e-15 87.8 89 49.4
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 1.2e-15 87.8 97 42.3
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 1.0e-14 84.7 78 47.4
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 3.0e-14 83.2 71 49.3
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 1.2e-13 81.3 142 33.8
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 3.7e-12 76.3 64 54.7
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 2.7e-10 70.1 104 33.7
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 1.5e-08 64.3 48 58.3


User provided reference genes

Program Settings