Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 2.0e-138 495.7 249 100.0
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 4.5e-114 414.8 237 88.6
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 3.2e-112 408.7 232 87.1
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 3.1e-107 392.1 232 86.6
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 5.0e-105 384.8 237 81.0
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 2.5e-104 382.5 237 81.0
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 9.5e-104 380.6 232 81.0
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 5.4e-99 364.8 239 77.4
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 3.1e-94 349.0 238 74.4
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 6.0e-90 334.7 238 72.3
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 1.0e-89 334.0 240 72.1
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 1.0e-89 334.0 238 70.2
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 4.7e-87 325.1 238 70.6
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 7.1e-83 311.2 237 68.4
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 7.1e-83 311.2 237 67.9
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 5.1e-81 305.1 235 66.8
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 6.6e-81 304.7 238 65.5
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 6.6e-81 304.7 238 65.5
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 6.6e-81 304.7 239 66.9
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 6.6e-81 304.7 239 66.9
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 9.5e-80 300.8 239 66.5
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.1e-78 297.4 239 65.7
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.8e-78 296.6 239 65.7
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 2.4e-78 296.2 238 66.4
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.2e-77 293.9 239 64.9
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 4.4e-77 292.0 239 62.8
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 2.9e-76 289.3 239 64.0
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 4.9e-76 288.5 238 65.1
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 6.4e-76 288.1 235 65.5
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 4.1e-75 285.4 236 64.0
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 4.1e-75 285.4 236 64.0
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 1.7e-73 280.0 235 63.0
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 3.9e-73 278.9 238 60.9
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 2.8e-71 272.7 239 60.3
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 4.0e-70 268.9 240 61.2
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.6e-69 266.2 239 58.2
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 2.2e-68 263.1 239 59.4
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 8.4e-68 261.2 240 57.1
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 4.2e-67 258.8 240 57.9
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 3.5e-66 255.8 238 56.7
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.5e-66 255.8 239 59.0
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 3.5e-66 255.8 278 54.7
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 7.8e-66 254.6 244 57.8
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 1.1e-64 250.8 235 57.0
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 2.5e-64 249.6 217 61.8
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 3.3e-64 249.2 239 59.4
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 5.6e-64 248.4 240 56.7
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 7.3e-64 248.1 238 58.0
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.3e-63 247.3 235 58.3
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 3.1e-62 242.7 239 57.3
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.5e-61 240.4 238 54.6
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 2.6e-61 239.6 239 55.6
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 3.4e-61 239.2 238 54.2
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 9.9e-61 237.7 239 55.6
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 9.9e-61 237.7 240 56.2
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 1.7e-60 236.9 233 57.5
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.7e-60 236.9 242 55.0
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 1.4e-59 233.8 236 56.8
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 1.4e-59 233.8 240 52.9
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 9.3e-59 231.1 211 59.7
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 9.3e-59 231.1 242 53.3
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 1.2e-58 230.7 238 54.2
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 1.6e-58 230.3 235 55.7
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.6e-58 230.3 235 55.7
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 3.5e-58 229.2 255 50.6
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 3.5e-58 229.2 243 51.9
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 6.0e-58 228.4 242 53.3
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.0e-57 227.6 238 52.5
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 6.7e-57 224.9 255 51.0
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 1.5e-56 223.8 241 54.8
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 4.3e-56 222.2 239 51.9
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 5.6e-56 221.9 235 53.6
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 2.4e-54 216.5 218 56.9
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.9e-52 209.5 200 58.5
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.1e-51 207.6 233 48.5
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.5e-50 202.6 220 54.5
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 2.5e-48 196.4 193 57.5
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 1.8e-46 190.3 256 42.2
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 4.9e-44 182.2 218 47.2
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 8.4e-44 181.4 173 54.9
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.9e-43 180.3 220 51.4
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.5e-43 179.9 238 45.4
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 3.2e-43 179.5 239 45.6
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 4.6e-42 175.6 211 50.2
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 1.3e-41 174.1 140 59.3
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 6.7e-41 171.8 260 41.5
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 1.5e-40 170.6 237 43.0
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.7e-40 168.7 220 49.5
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 7.4e-40 168.3 273 44.0
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 9.7e-40 167.9 144 56.2
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 9.7e-40 167.9 192 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 4.5e-37 159.1 227 42.3
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 7.2e-35 151.8 193 49.7
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 3.6e-34 149.4 267 36.3
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 8.8e-33 144.8 183 47.5
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 9.1e-30 134.8 161 50.9
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 1.1e-27 127.9 157 52.2
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 3.2e-27 126.3 67 83.6
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 7.2e-27 125.2 160 50.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 1.2e-26 124.4 254 33.1
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 4.7e-26 122.5 163 50.3
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 7.9e-26 121.7 163 49.1
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 1.0e-25 121.3 161 47.2
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 1.8e-25 120.6 160 47.5
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 5.7e-24 115.5 124 55.6
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 5.7e-24 115.5 124 55.6
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.3e-23 114.4 124 54.8
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 2.8e-23 113.2 124 54.8
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 2.9e-20 103.2 67 74.6
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 5.0e-20 102.4 162 44.4
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 2.5e-19 100.1 150 47.3
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.0e-17 94.7 89 58.4
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.8e-17 91.7 155 43.9
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 1.1e-14 84.7 161 41.6
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 3.1e-14 83.2 123 47.2
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 2.2e-12 77.0 97 45.4
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.0e-12 75.9 47 74.5
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 7.5e-08 62.0 72 43.1
HanXRQChr16g0531491 Helianthus annuus HOM05D003211 ORTHO05D003621 3.1e-06 56.6 123 32.5
AL3G26590 Arabidopsis lyrata HOM05D000903 ORTHO05D000731 4.1e-06 56.2 107 29.0
AT3G14270 Arabidopsis thaliana HOM05D000903 ORTHO05D000731 4.1e-06 56.2 107 29.0


User provided reference genes

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