Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 2.1e-101 372.5 201 100.0
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 8.8e-84 313.9 201 84.1
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 2.5e-78 295.8 201 80.6
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 1.7e-63 246.5 201 67.7
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 1.9e-62 243.0 191 69.6
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 1.5e-59 233.4 196 65.8
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 1.1e-54 217.2 191 66.0
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 4.0e-52 208.8 203 61.6
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 3.2e-49 199.1 194 61.3
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 3.2e-49 199.1 194 61.3
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 3.2e-49 199.1 189 60.3
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 9.2e-49 197.6 200 59.0
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 1.6e-45 186.8 203 56.7
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 1.8e-44 183.3 197 52.8
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 6.8e-44 181.4 198 54.0
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 8.9e-44 181.0 166 60.8
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 1.3e-42 177.2 173 60.7
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 4.9e-42 175.3 204 54.4
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 2.4e-41 172.9 192 56.2
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 5.1e-39 165.2 204 51.5
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 4.0e-36 155.6 167 57.5
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 2.2e-34 149.8 162 57.4
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 4.6e-32 142.1 164 53.0
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 3.9e-31 139.0 166 51.8
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 1.9e-30 136.7 164 52.4
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 2.1e-29 133.3 169 51.5
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 2.1e-29 133.3 133 57.9
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 6.2e-29 131.7 165 52.7
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 6.2e-29 131.7 162 51.2
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 8.1e-29 131.3 168 50.0
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 2.4e-28 129.8 197 46.2
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 5.2e-28 128.6 168 48.8
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 4.4e-27 125.6 161 48.4
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 1.4e-25 120.6 162 46.3
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 1.2e-24 117.5 166 47.0
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 2.1e-24 116.7 195 45.1
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 1.0e-23 114.4 170 44.7
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 3.9e-23 112.5 169 45.6
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 6.6e-23 111.7 170 42.9
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 3.3e-22 109.4 161 44.1
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 4.7e-21 105.5 171 43.9
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 6.2e-21 105.1 167 42.5
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 8.1e-21 104.8 164 46.3
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 1.1e-20 104.4 169 43.8
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.4e-20 104.0 178 39.9
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 4.0e-20 102.4 179 39.7
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 5.8e-19 98.6 157 43.3
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 1.4e-17 94.0 130 45.4
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.9e-17 93.6 161 41.6
CAN.G1585.7 Capsicum annuum HOM05D007972 ORTHO05D010352 3.2e-17 92.8 162 42.0
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 1.0e-15 87.8 157 40.1
PGSC0003DMG401031172 Solanum tuberosum HOM05D007972 ORTHO05D010352 1.0e-15 87.8 174 39.1
Phvul.008G048532 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 1.3e-15 87.4 99 54.5
PGSC0003DMG400031171 Solanum tuberosum HOM05D007972 ORTHO05D010352 1.7e-15 87.0 161 40.4
Solyc01g089880.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 3.0e-15 86.3 158 40.5
Sopen01g035720 Solanum pennellii HOM05D007972 ORTHO05D010352 3.9e-15 85.9 158 41.1
Sopen01g035730 Solanum pennellii HOM05D007972 ORTHO05D010352 1.9e-14 83.6 122 44.3
QL04p029065 Quercus lobata HOM05D007972 ORTHO05D010352 3.6e-13 79.3 113 48.7
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 4.0e-12 75.9 161 36.0
Phvul.008G048466 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 5.3e-12 75.5 80 53.8
arahy.Tifrunner.gnm1.ann1.F86J4F Arachis hypogaea HOM05D005905 ORTHO05D005996 4.6e-08 62.4 48 60.4
EL10Ac2g02566 Beta vulgaris HOM05D007972 ORTHO05D010352 3.9e-07 59.3 62 51.6
Eucgr.E01540 Eucalyptus grandis HOM05D007972 ORTHO05D010352 6.7e-07 58.5 102 40.2


User provided reference genes

Program Settings