Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat3g085280 Pisum sativum HOM05D000912 ORTHO05D023081 2.0e-223 778.9 421 100.0
Psat4g185320 Pisum sativum HOM05D001395 ORTHO05D015826 1.4e-86 324.3 255 72.2
Psat0ss25761g0120 Pisum sativum HOM05D000735 ORTHO05D004613 2.2e-52 210.7 231 55.8
TPR.G29985 Trifolium pratense HOM05D000344 ORTHO05D000934 6.8e-46 189.1 150 70.7
Psat4g176040 Pisum sativum HOM05D000251 ORTHO05D001752 1.7e-41 174.5 160 70.6
Medtr5g032380 Medicago truncatula HOM05D000344 ORTHO05D000934 1.9e-40 171.0 150 64.0
Psat0s2083g0040 Pisum sativum HOM05D000230 ORTHO05D011671 1.7e-36 157.9 103 76.7
Ca_04531_v3 Cicer arietinum L. HOM05D000344 ORTHO05D000934 5.4e-35 152.9 150 61.3
Lj2g0008766 Lotus japonicus HOM05D000344 ORTHO05D000934 5.4e-35 152.9 151 59.6
Psat5g056680 Pisum sativum HOM05D003435 ORTHO05D023081 1.2e-34 151.8 75 90.7
Psat0s2083g0080 Pisum sativum HOM05D000230 ORTHO05D011671 1.6e-31 141.4 66 97.0
arahy.Tifrunner.gnm1.ann1.H5JAQU Arachis hypogaea HOM05D000344 ORTHO05D000934 1.2e-29 135.2 152 54.6
arahy.Tifrunner.gnm1.ann1.NJT31C Arachis hypogaea HOM05D000344 ORTHO05D000934 1.2e-29 135.2 152 54.6
Glyma.01G023900 Glycine max HOM05D000344 ORTHO05D000934 1.5e-29 134.8 150 55.3
Glyma.02G040900 Glycine max HOM05D000344 ORTHO05D000934 4.5e-29 133.3 131 62.6
Phvul.002G148100 Phaseolus vulgaris HOM05D000344 ORTHO05D000934 6.4e-28 129.4 131 58.0
VMungo1215G2589 Vigna mungo HOM05D000344 ORTHO05D000934 8.4e-28 129.0 136 59.6
Psat7g264600 Pisum sativum HOM05D000912 ORTHO05D001232 1.6e-26 124.8 70 88.6
Psat2g092600 Pisum sativum HOM05D000912 ORTHO05D023081 2.7e-26 124.0 70 85.7
Ca_03788_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 6.0e-26 122.9 70 87.1
Psat0s3766g0080 Pisum sativum HOM05D002292 ORTHO05D006272 1.0e-25 122.1 68 92.6
TPR.G38732 Trifolium pratense HOM05D000912 ORTHO05D001232 8.7e-25 119.0 70 82.9
Medtr4g005050 Medicago truncatula HOM05D000912 ORTHO05D001232 2.1e-23 114.4 70 84.3
Lj3g0006194 Lotus japonicus HOM05D000912 ORTHO05D001232 1.5e-21 108.2 70 78.6
Lalb_Chr19g0140521 Lupinus albus HOM05D000912 ORTHO05D001232 2.9e-20 104.0 70 72.9
Lalb_Chr05g0216451 Lupinus albus HOM05D000344 ORTHO05D000934 8.4e-20 102.4 134 50.7
Glyma.08G226700 Glycine max HOM05D000912 ORTHO05D001232 3.2e-19 100.5 70 72.9
Psat3g106120 Pisum sativum HOM05D000936 ORTHO05D023081 3.2e-19 100.5 63 81.0
Glyma.07G000400 Glycine max HOM05D000912 ORTHO05D001232 4.2e-19 100.1 70 71.4
arahy.Tifrunner.gnm1.ann1.DM6RAW Arachis hypogaea HOM05D000912 ORTHO05D001232 5.5e-19 99.8 70 67.1
arahy.Tifrunner.gnm1.ann1.PZ05LS Arachis hypogaea HOM05D000912 ORTHO05D001232 5.5e-19 99.8 70 67.1
Psat3g106040 Pisum sativum HOM05D000912 ORTHO05D023081 2.1e-18 97.8 63 79.4
Lalb_Chr04g0264771 Lupinus albus HOM05D000912 ORTHO05D001232 2.7e-18 97.4 70 70.0
VMungo0331G0786 Vigna mungo HOM05D000912 ORTHO05D001232 7.9e-18 95.9 70 71.4
Phvul.010G165900 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 6.7e-17 92.8 69 68.1
Psat7g022320 Pisum sativum HOM05D000001 ORTHO05D000003 4.8e-15 86.7 118 46.6
Phvul.005G082300 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 9.0e-14 82.4 67 64.2
QL05p085111 Quercus lobata HOM05D000912 ORTHO05D001232 2.0e-13 81.3 70 58.6
Glyma.15G000300 Glycine max HOM05D000912 ORTHO05D001232 4.5e-13 80.1 67 62.7
Cpa.g.sc10.17 Carica papaya HOM05D000912 ORTHO05D001232 2.2e-12 77.8 69 56.5
Atru.chr3.4082 Acer truncatum HOM05D000912 ORTHO05D001232 4.2e-11 73.6 70 54.3
CiPaw.02G050600 Carya illinoinensis HOM05D000912 ORTHO05D001232 1.2e-10 72.0 69 58.0
Psat2g142080 Pisum sativum HOM05D000824 ORTHO05D002221 1.2e-10 72.0 35 85.7
VMungo1080G1388 Vigna mungo HOM05D000912 ORTHO05D001232 1.2e-10 72.0 64 56.2
CiPaw.02G051600 Carya illinoinensis HOM05D000912 ORTHO05D001232 1.6e-10 71.6 70 54.3
Sabra14G0003100 Salix brachista HOM05D000912 ORTHO05D001232 1.6e-10 71.6 70 52.9
Potri.014G000500 Populus trichocarpa HOM05D000912 ORTHO05D001232 3.5e-10 70.5 70 50.0
TAR626G1203 Trochodendron aralioides HOM05D000912 ORTHO05D001232 4.6e-10 70.1 70 54.3
CSS0005184 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.3e-09 68.6 69 53.6
CSS0006911 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.3e-09 68.6 69 53.6
TWI75G1589 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 3.0e-09 67.4 70 52.9
Ciclev10027674m.g Citrus clementina HOM05D000912 ORTHO05D001232 1.1e-08 65.5 70 52.9
Dinv37769 Davidia involucrata HOM05D000912 ORTHO05D001232 1.5e-08 65.1 69 50.7
GSVIVG01029442001 Vitis vinifera HOM05D000912 ORTHO05D001232 1.5e-08 65.1 60 55.0
Cfa014793 Carpinus fangiana HOM05D000912 ORTHO05D001232 1.9e-08 64.7 70 45.7
Duzib235G0834 Durio zibethinus HOM05D000912 ORTHO05D001232 1.9e-08 64.7 70 45.7
CsaV3_3G000040 Cucumis sativus L. HOM05D000912 ORTHO05D001232 3.3e-08 63.9 70 50.0
TAR636G0354 Trochodendron aralioides HOM05D000912 ORTHO05D001232 4.3e-08 63.5 70 52.9
Thecc.06G049100 Theobroma cacao HOM05D000912 ORTHO05D001232 1.3e-07 62.0 57 52.6
Manes.14G000700 Manihot esculenta HOM05D000912 ORTHO05D001232 1.6e-07 61.6 65 55.4
Potri.007G003400 Populus trichocarpa HOM05D000912 ORTHO05D001232 1.6e-07 61.6 69 47.8
CANSAT01G3172 Cannabis sativa HOM05D000912 ORTHO05D001232 2.2e-07 61.2 65 52.3
Haze_16248 Corylus avellana HOM05D000912 ORTHO05D001232 2.8e-07 60.8 69 44.9
MELO3C013698.2 Cucumis melo HOM05D000912 ORTHO05D001232 2.8e-07 60.8 70 47.1
Psat0s520g0120 Pisum sativum HOM05D003361 ORTHO05D003760 2.8e-07 60.8 96 46.9
Sed0017344 Sechium edule HOM05D000912 ORTHO05D001232 2.8e-07 60.8 70 47.1
Glyma.09G213500 Glycine max HOM05D000824 ORTHO05D002221 3.7e-07 60.5 65 49.2
Gohir.D06G189400 Gossypium hirsutum HOM05D000912 ORTHO05D001232 3.7e-07 60.5 67 44.8
Psat1g151000 Pisum sativum HOM05D000001 ORTHO05D000003 3.7e-07 60.5 82 41.5
Rhsim03G0000100 Rhododendron simsii HOM05D000912 ORTHO05D001232 3.7e-07 60.5 69 50.7
Sabra07G0002500 Salix brachista HOM05D000912 ORTHO05D001232 6.3e-07 59.7 67 46.3
Nn8g41285 Nelumbo nucifera HOM05D000912 ORTHO05D001232 8.2e-07 59.3 69 49.3
Dinv20312 Davidia involucrata HOM05D000912 ORTHO05D001232 1.4e-06 58.5 69 50.7
CSS0008849 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.8e-06 58.2 69 52.2
Manes.14G000600 Manihot esculenta HOM05D000912 ORTHO05D001232 1.8e-06 58.2 65 52.3
Potri.019G036800 Populus trichocarpa HOM05D000912 ORTHO05D011835 1.8e-06 58.2 69 46.4
Sed0017205 Sechium edule HOM05D000912 ORTHO05D001232 2.4e-06 57.8 70 47.1
TWI12G0824 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 2.4e-06 57.8 70 47.1
TWI18G1361 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 2.4e-06 57.8 70 47.1
Gohir.A06G182500 Gossypium hirsutum HOM05D000912 ORTHO05D001232 4.1e-06 57.0 67 43.3
Cc11_g00260 Coffea canephora HOM05D000912 ORTHO05D001232 5.3e-06 56.6 70 50.0
Duzib192G0163 Durio zibethinus HOM05D000912 ORTHO05D001232 5.3e-06 56.6 57 50.9
Gorai.010G222100 Gossypium raimondii HOM05D000912 ORTHO05D001232 5.3e-06 56.6 67 41.8
Sp1g14860 Schrenkiella parvula HOM05D000912 ORTHO05D001232 6.9e-06 56.2 69 43.5
vmacro21728 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 6.9e-06 56.2 69 44.9
Eucgr.D02593 Eucalyptus grandis HOM05D000824 ORTHO05D002221 9.0e-06 55.8 75 42.7
Lalb_Chr16g0380751 Lupinus albus HOM05D000824 ORTHO05D002221 9.0e-06 55.8 64 43.8
Potri.003G102700 Populus trichocarpa HOM05D000824 ORTHO05D002221 9.0e-06 55.8 46 56.5
Hund11146 Selenicereus undatus HOM05D000824 ORTHO05D002221 9.0e-06 55.8 45 53.3
TAR383G0444 Trochodendron aralioides HOM05D000912 ORTHO05D001232 9.0e-06 55.8 70 50.0


User provided reference genes

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