Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 8.8e-99 363.6 182 100.0
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 2.1e-52 209.5 182 62.6
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 5.4e-40 168.3 181 50.8
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 3.9e-38 162.2 181 48.1
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-35 154.1 181 47.5
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 7.1e-32 141.4 181 45.3
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-31 140.2 183 44.3
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 6.0e-31 138.3 183 44.3
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 6.0e-31 138.3 175 42.9
Medtr5g081820 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-29 134.0 182 44.0
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-28 130.6 137 48.2
Medtr1g055290 Medicago truncatula HOM05D004894 ORTHO05D005689 2.1e-28 129.8 184 44.0
TPR.G30777 Trifolium pratense HOM05D004894 ORTHO05D005689 4.7e-28 128.6 172 43.0
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 2.4e-27 126.3 188 40.4
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 4.0e-27 125.6 189 40.2
Psat3g038720 Pisum sativum HOM05D004894 ORTHO05D005689 7.6e-26 121.3 65 90.8
Medtr1g054740 Medicago truncatula HOM05D004894 ORTHO05D005689 6.4e-25 118.2 183 42.6
Medtr5g081840 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-24 117.5 180 42.2
TPR.G14498 Trifolium pratense HOM05D004894 ORTHO05D005689 5.4e-24 115.2 176 40.9
TPR.G30770 Trifolium pratense HOM05D004894 ORTHO05D005689 9.3e-24 114.4 172 40.1
TPR.G22347 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-23 113.6 183 36.6
Medtr1g018130 Medicago truncatula HOM05D004894 ORTHO05D005689 2.7e-23 112.8 164 42.7
TPR.G30772 Trifolium pratense HOM05D004894 ORTHO05D005689 3.5e-23 112.5 183 39.9
Medtr1g054800 Medicago truncatula HOM05D004894 ORTHO05D005689 4.6e-23 112.1 183 41.0
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 3.0e-22 109.4 173 38.7
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 3.0e-22 109.4 173 38.7
Medtr4g036790 Medicago truncatula HOM05D004894 ORTHO05D005689 6.6e-22 108.2 182 40.1
Psat2g178280 Pisum sativum HOM05D004894 ORTHO05D005689 1.5e-21 107.1 95 51.6
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 4.3e-21 105.5 172 34.9
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-20 103.2 172 38.4
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 1.4e-19 100.5 174 37.4
Medtr1g054745 Medicago truncatula HOM05D004894 ORTHO05D005689 4.0e-19 99.0 146 38.4
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 2.0e-18 96.7 105 42.9
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-18 95.9 175 35.4
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 3.4e-18 95.9 168 35.1
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 5.8e-18 95.1 179 35.8
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 7.6e-18 94.7 181 33.7
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 1.7e-17 93.6 183 33.3
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 3.8e-17 92.4 190 31.6
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 4.9e-17 92.0 182 34.1
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 6.4e-17 91.7 175 35.4
Medtr1g058550 Medicago truncatula HOM05D004894 ORTHO05D005689 2.4e-16 89.7 175 33.1
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 2.4e-16 89.7 180 29.4
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 3.2e-16 89.4 157 35.7
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 5.4e-16 88.6 105 42.9
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 5.4e-16 88.6 148 33.8
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 9.3e-16 87.8 178 33.7
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-15 87.4 188 34.6
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 1.6e-15 87.0 174 33.9
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-15 86.7 183 31.1
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.1e-15 86.7 190 31.6
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 6.0e-15 85.1 141 36.2
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 1.0e-14 84.3 148 31.8
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 1.8e-14 83.6 155 30.3
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-14 83.2 174 31.6
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 3.9e-14 82.4 133 39.1
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 5.1e-14 82.0 173 31.2
Medtr6g037800 Medicago truncatula HOM05D004894 ORTHO05D005689 8.7e-14 81.3 165 29.7
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 1.5e-13 80.5 148 29.1
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 3.3e-13 79.3 182 30.8
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 3.3e-13 79.3 124 34.7
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 4.3e-13 79.0 182 30.8
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 7.4e-13 78.2 137 32.8
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 7.4e-13 78.2 185 31.9
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 7.4e-13 78.2 185 31.9
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 7.4e-13 78.2 184 31.5
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 9.6e-13 77.8 181 30.9
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.3e-12 77.4 179 30.7
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 1.6e-12 77.0 154 28.6
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 2.8e-12 76.3 188 32.4
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 4.8e-12 75.5 178 28.7
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 6.2e-12 75.1 119 37.8
TPR.G28009 Trifolium pratense HOM05D004894 ORTHO05D005689 6.2e-12 75.1 174 32.2
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 3.1e-11 72.8 134 38.1
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 4.0e-11 72.4 175 28.6
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 4.0e-11 72.4 175 28.6
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 4.0e-11 72.4 175 28.6
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 4.0e-11 72.4 175 28.6
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 5.3e-11 72.0 182 28.0
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 1.5e-10 70.5 175 28.6
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 1.5e-10 70.5 175 28.0
TPR.G17037 Trifolium pratense HOM05D004894 ORTHO05D005689 1.5e-10 70.5 120 33.3
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 3.4e-10 69.3 172 28.5
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 2.9e-09 66.2 160 28.1
Cfa018297 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.1e-08 64.3 166 25.9
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 5.5e-08 62.0 184 28.8
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 1.2e-07 60.8 162 27.8
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 1.6e-07 60.5 185 28.6
Migut.C00972 Erythranthe guttata HOM05D011489 ORTHO05D005689 1.3e-06 57.4 184 28.8
Medtr3g060470 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-06 57.4 148 28.4
Medtr3g060520 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-06 57.4 148 28.4
Medtr3g060570 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-06 57.4 148 28.4
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 5.1e-06 55.5 159 26.4
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 8.7e-06 54.7 159 25.8


User provided reference genes

Program Settings