Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 1.1e-252 876.3 484 100.0
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 8.1e-168 594.3 497 73.4
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 7.9e-155 551.2 482 69.5
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 6.1e-131 471.9 470 59.8
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.2e-123 447.6 498 56.4
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 3.0e-106 389.8 494 49.8
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 3.1e-103 379.8 467 50.5
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 9.5e-100 368.2 495 47.9
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 2.6e-97 360.1 426 58.2
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.7e-94 350.1 581 42.3
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 4.7e-83 312.8 462 45.2
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 7.3e-60 235.7 490 36.7
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 4.7e-59 233.0 493 36.1
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 1.8e-58 231.1 495 38.0
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.1e-58 230.3 489 35.8
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.6e-57 227.3 492 35.6
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.4e-55 221.5 520 34.8
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 2.4e-55 220.7 495 38.0
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.7e-54 217.2 493 35.3
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 5.1e-53 213.0 476 36.3
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.3e-51 208.4 517 36.0
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.6e-51 208.0 551 32.7
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 1.6e-51 208.0 494 38.3
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 2.1e-51 207.6 474 36.1
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.6e-51 206.8 387 39.5
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 4.0e-50 203.4 488 35.5
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-49 201.4 485 34.2
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 2.0e-49 201.1 464 38.6
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 4.2e-47 193.4 513 35.9
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 3.3e-44 183.7 511 32.9
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 8.1e-43 179.1 490 33.9
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 6.9e-42 176.0 459 35.1
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 1.7e-40 171.4 488 33.4
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 5.5e-39 166.4 476 33.4
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 2.7e-38 164.1 133 63.2
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 6.0e-38 162.9 483 33.1
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 1.5e-36 158.3 133 61.7
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 3.3e-36 157.1 505 30.9
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 4.3e-36 156.8 505 31.1
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 1.2e-33 148.7 497 34.4
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 6.5e-32 142.9 402 30.6
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 4.6e-30 136.7 391 32.7
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 2.3e-29 134.4 368 33.2
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 2.3e-29 134.4 523 31.2
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 3.0e-29 134.0 496 29.6
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 6.7e-29 132.9 361 30.5
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 1.9e-28 131.3 500 29.0
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.3e-27 128.6 408 29.4
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.3e-27 128.6 408 29.7
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.6e-27 128.3 394 31.2
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 8.2e-27 125.9 495 29.3
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 8.2e-27 125.9 497 29.0
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.1e-26 125.6 496 30.6
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 1.1e-26 125.6 476 29.2
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.4e-26 125.2 507 29.0
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 1.8e-26 124.8 475 28.2
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.8e-26 124.8 478 28.0
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 2.4e-26 124.4 495 29.1
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 2.4e-26 124.4 312 34.0
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 5.3e-26 123.2 496 28.4
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 1.2e-25 122.1 407 29.5
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 1.5e-25 121.7 482 28.0
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 7.7e-25 119.4 421 28.0
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 1.3e-24 118.6 541 27.0
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 2.9e-24 117.5 339 34.2
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 3.8e-24 117.1 479 27.6
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 2.5e-23 114.4 511 27.6
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 3.2e-23 114.0 428 27.8
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 4.6e-22 110.2 456 29.2
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 7.9e-22 109.4 477 28.7
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.5e-20 105.1 492 26.6
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 9.7e-20 102.4 360 30.3
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.4e-18 97.8 522 25.9
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 4.1e-18 97.1 386 28.0
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 9.1e-18 95.9 364 27.7
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.2e-17 95.5 386 28.5
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 2.0e-17 94.7 465 24.7
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 2.0e-17 94.7 352 27.8
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 5.9e-17 93.2 362 29.3
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 5.9e-17 93.2 362 29.3
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 2.9e-16 90.9 362 27.6
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 6.5e-16 89.7 457 26.3
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 8.5e-16 89.4 420 25.7
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 3.6e-14 84.0 295 30.8
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 6.1e-14 83.2 369 27.6
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 7.9e-14 82.8 362 26.2
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 3.9e-13 80.5 366 29.2
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.0e-12 78.2 369 29.8
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 4.4e-12 77.0 383 26.1
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 4.4e-12 77.0 387 28.7
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 7.4e-12 76.3 376 26.9
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 9.7e-12 75.9 365 26.6
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.2e-11 74.7 327 27.2
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 2.8e-11 74.3 368 25.8
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 4.8e-11 73.6 365 27.9
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 1.4e-10 72.0 294 25.2
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 3.1e-10 70.9 301 28.6
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 5.3e-10 70.1 322 23.9
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 8.5e-08 62.8 450 22.2
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 1.5e-07 62.0 353 25.5


User provided reference genes

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