Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 1.4e-204 716.1 355 100.0
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.3e-167 593.2 358 83.8
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 7.5e-155 550.8 356 78.1
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 2.9e-146 522.3 340 74.4
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 2.9e-138 495.7 306 76.8
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 2.0e-123 446.4 338 64.2
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 2.9e-122 442.6 322 65.5
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 6.4e-122 441.4 296 69.6
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.9e-121 439.9 269 81.8
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 4.2e-121 438.7 304 73.0
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 9.3e-121 437.6 351 62.7
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.2e-120 437.2 310 67.1
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.6e-120 436.8 334 62.0
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 2.1e-120 436.4 298 67.1
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.7e-120 436.0 321 62.9
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 3.0e-119 432.6 356 59.8
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 5.1e-119 431.8 348 60.3
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 8.7e-119 431.0 323 60.4
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 3.3e-118 429.1 347 60.8
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 5.6e-118 428.3 312 63.8
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 1.3e-117 427.2 339 61.9
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 6.2e-117 424.9 310 65.5
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 2.4e-116 422.9 310 62.9
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 2.4e-116 422.9 306 64.4
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 3.1e-116 422.5 324 60.5
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 5.3e-116 421.8 324 60.8
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 9.0e-116 421.0 314 62.1
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.2e-115 420.6 313 62.0
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 1.5e-115 420.2 321 59.5
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 2.0e-115 419.9 309 62.1
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 2.6e-115 419.5 304 64.1
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 3.4e-115 419.1 309 62.8
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 5.8e-115 418.3 318 61.3
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 1.0e-114 417.5 316 59.8
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.2e-114 416.4 322 59.3
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 2.9e-114 416.0 308 61.0
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 6.5e-114 414.8 330 59.7
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 1.1e-113 414.1 302 62.3
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 2.5e-113 412.9 335 59.4
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 4.2e-113 412.1 306 62.7
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 4.2e-113 412.1 326 59.5
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 5.5e-113 411.8 301 62.5
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 7.1e-113 411.4 321 60.4
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 7.1e-113 411.4 339 59.0
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 7.1e-113 411.4 321 60.4
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 1.2e-112 410.6 319 62.4
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 1.6e-112 410.2 283 66.8
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.1e-112 409.8 298 64.8
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 2.7e-112 409.5 306 61.8
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.3e-111 407.1 309 61.8
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 5.1e-111 405.2 287 68.3
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 5.1e-111 405.2 343 55.1
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-110 404.1 298 64.1
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 2.5e-110 402.9 327 58.4
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 5.7e-110 401.7 340 57.9
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 7.4e-110 401.4 280 66.4
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 3.7e-109 399.1 306 58.2
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 4.8e-109 398.7 351 58.7
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 8.2e-109 397.9 324 59.0
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.7e-106 390.2 330 57.9
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 3.8e-106 389.0 310 59.4
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 8.5e-106 387.9 334 52.4
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 6.1e-104 381.7 278 64.7
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 1.0e-103 380.9 337 55.8
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 3.0e-103 379.4 303 59.1
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 6.9e-100 368.2 310 55.2
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 1.2e-99 367.5 305 55.4
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.4e-99 365.9 390 49.0
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.8e-98 362.5 316 54.1
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 1.2e-96 357.5 332 53.3
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 2.7e-96 356.3 357 52.9
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 1.4e-95 354.0 468 41.5
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 5.1e-95 352.1 278 58.3
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 8.8e-95 351.3 343 51.9
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 9.7e-94 347.8 261 59.4
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 2.4e-92 343.2 235 67.2
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 3.1e-92 342.8 303 51.5
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 9.1e-92 341.3 256 63.3
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 3.2e-89 332.8 324 52.2
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 1.2e-88 330.9 354 51.1
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 5.7e-86 322.0 249 59.4
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 9.7e-86 321.2 256 57.8
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 3.1e-84 316.2 240 60.4
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 2.6e-83 313.2 279 52.3
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 4.2e-81 305.8 235 59.6
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 4.7e-80 302.4 291 46.7
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 1.2e-78 297.7 231 61.0
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 4.4e-78 295.8 337 46.3
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 3.0e-71 273.1 209 62.7
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 4.0e-71 272.7 210 60.0
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 2.2e-69 266.9 200 62.5
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.4e-68 264.2 281 44.8
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 4.1e-68 262.7 151 80.8
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 8.0e-64 248.4 315 44.4
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.0e-63 246.5 304 39.8
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.8e-55 220.7 174 59.2
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 3.4e-54 216.5 297 42.8
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 4.9e-53 212.6 202 52.5
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.1e-52 211.5 202 52.5
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 1.4e-52 211.1 342 37.7
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 4.6e-51 206.1 145 63.4
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 3.0e-50 203.4 146 62.3
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 6.4e-45 185.7 127 66.1
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.1e-43 180.6 173 55.5
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 6.0e-43 179.1 251 35.9
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.0e-42 176.8 104 71.2
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 3.0e-42 176.8 432 30.8
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.5e-33 147.9 97 66.0
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 1.1e-31 141.7 84 69.0
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 8.4e-29 132.1 76 73.7
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 4.2e-28 129.8 138 52.2
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.6e-27 127.9 76 71.1
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.3e-26 124.8 88 62.5
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 2.4e-23 114.0 334 26.9
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 4.4e-22 109.8 263 28.1
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 5.1e-18 96.3 76 55.3
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 7.3e-17 92.4 291 29.2
Ca_12392_v3 Cicer arietinum L. HOM05D000112 ORTHO05D023238 3.5e-11 73.6 49 79.6
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 2.5e-09 67.4 51 62.7
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 1.6e-08 64.7 46 58.7
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 4.8e-08 63.2 47 66.0
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 1.8e-07 61.2 43 60.5


User provided reference genes

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