Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat3g026560 Pisum sativum HOM05D008364 ORTHO05D009578 2.2e-75 285.4 134 100.0
Medtr3g089950 Medicago truncatula HOM05D008364 ORTHO05D009578 1.5e-23 113.2 140 46.4
TPR.G14402 Trifolium pratense HOM05D008364 ORTHO05D009578 8.6e-19 97.4 138 41.3
Medtr1g021540 Medicago truncatula HOM05D008364 ORTHO05D009578 1.2e-12 77.0 68 52.9
Medtr7g107110 Medicago truncatula HOM05D008364 ORTHO05D009578 2.1e-12 76.3 104 47.1
Potri.002G011500 Populus trichocarpa HOM05D008364 ORTHO05D009578 7.8e-12 74.3 125 36.0
Prupe.4G231200 Prunus persica HOM05D008364 ORTHO05D009578 8.6e-11 70.9 142 29.6
QL09p001451 Quercus lobata HOM05D008364 ORTHO05D009578 1.1e-10 70.5 143 36.4
Sabra02G0008600 Salix brachista HOM05D008364 ORTHO05D009578 7.3e-10 67.8 97 35.1
QL05p084023 Quercus lobata HOM05D008364 ORTHO05D009578 6.2e-09 64.7 86 38.4
Sabra02G0008900 Salix brachista HOM05D008364 ORTHO05D009578 1.1e-08 63.9 93 36.6
QL09p004857 Quercus lobata HOM05D009668 ORTHO05D009578 5.2e-08 61.6 119 37.0
Atru.chr9.2110 Acer truncatum HOM05D009668 ORTHO05D009578 1.2e-07 60.5 138 33.3
Prupe.5G226000 Prunus persica HOM05D008364 ORTHO05D009578 2.0e-07 59.7 73 34.2
Atru.chr1.58 Acer truncatum HOM05D009668 ORTHO05D009578 2.6e-07 59.3 127 34.6
CiPaw.12G135100 Carya illinoinensis HOM05D008364 ORTHO05D009578 4.4e-07 58.5 70 37.1
Carub.0005s1742 Capsella rubella HOM05D008364 ORTHO05D009578 5.8e-07 58.2 132 28.8
AL5G31440 Arabidopsis lyrata HOM05D008364 ORTHO05D009578 7.6e-07 57.8 125 28.0
Carub.0001s3320 Capsella rubella HOM05D015281 ORTHO05D017419 9.9e-07 57.4 131 29.0
Medtr7g029145 Medicago truncatula HOM05D022442 ORTHO05D036748 1.7e-06 56.6 131 31.3
BraA02t06029Z Brassica rapa HOM05D013083 ORTHO05D009578 2.2e-06 56.2 142 31.0
Gohir.A11G277700 Gossypium hirsutum HOM05D008364 ORTHO05D009578 2.2e-06 56.2 118 31.4
Medtr7g109930 Medicago truncatula HOM05D008364 ORTHO05D009578 2.9e-06 55.8 56 42.9
Ciclev10007119m.g Citrus clementina HOM05D009668 ORTHO05D009578 3.8e-06 55.5 131 29.0
Duzib068G1047 Durio zibethinus HOM05D009668 ORTHO05D009578 3.8e-06 55.5 63 38.1
Gohir.D11G287832 Gossypium hirsutum HOM05D008364 ORTHO05D009578 3.8e-06 55.5 122 33.6
A02p09650 Brassica napus HOM05D013083 ORTHO05D009578 4.9e-06 55.1 143 30.1
TPR.G4040 Trifolium pratense HOM05D009668 ORTHO05D009578 4.9e-06 55.1 56 41.1
FvH4_3g23891 Fragaria vesca HOM05D008364 ORTHO05D009578 6.4e-06 54.7 131 26.0
FAN11G2266 Fragaria x ananassa HOM05D008364 ORTHO05D009578 6.4e-06 54.7 131 26.0
CARHR160600 Cardamine hirsuta HOM05D008364 ORTHO05D009578 8.4e-06 54.3 127 27.6
Medtr3g084890 Medicago truncatula HOM05D009668 ORTHO05D009578 8.4e-06 54.3 56 41.1


User provided reference genes

Program Settings