Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s5319g0120 Pisum sativum HOM05D004588 ORTHO05D005365 2.4e-37 158.3 77 100.0
Psat2g183080 Pisum sativum HOM05D004588 ORTHO05D005365 2.4e-37 158.3 77 100.0
Psat7g249240 Pisum sativum HOM05D004588 ORTHO05D005365 1.3e-32 142.5 71 97.2
Psat2g183160 Pisum sativum HOM05D004588 ORTHO05D005365 9.6e-23 109.8 57 94.7
Ca_10717_v3 Cicer arietinum L. HOM05D004588 ORTHO05D005365 4.8e-22 107.5 57 93.0
Ca_20351_v3 Cicer arietinum L. HOM05D004588 ORTHO05D005365 4.8e-22 107.5 57 93.0
Psat0s11495g0040 Pisum sativum HOM05D004588 ORTHO05D005365 4.8e-22 107.5 57 93.0
TPR.G5271 Trifolium pratense HOM05D004588 ORTHO05D005365 4.8e-22 107.5 57 93.0
Lj4g0014219 Lotus japonicus HOM05D004588 ORTHO05D005365 1.1e-21 106.3 57 91.2
Medtr4g014360 Medicago truncatula HOM05D004588 ORTHO05D005365 1.4e-21 105.9 57 89.5
Psat0s5319g0080 Pisum sativum HOM05D004588 ORTHO05D005365 1.8e-21 105.5 57 91.2
Lalb_Chr02g0150391 Lupinus albus HOM05D004588 ORTHO05D005365 3.1e-21 104.8 57 87.7
Lalb_Chr06g0169291 Lupinus albus HOM05D004588 ORTHO05D005365 3.1e-21 104.8 57 87.7
Medtr6g005030 Medicago truncatula HOM05D004588 ORTHO05D005365 3.1e-21 104.8 57 87.7
Potri.006G080200 Populus trichocarpa HOM05D004588 ORTHO05D005365 9.0e-21 103.2 57 87.7
Sabra06G0060700 Salix brachista HOM05D004588 ORTHO05D005365 2.0e-20 102.1 57 86.0
arahy.Tifrunner.gnm1.ann1.7DYL36 Arachis hypogaea HOM05D004588 ORTHO05D005365 2.6e-20 101.7 57 86.0
arahy.Tifrunner.gnm1.ann1.7K7KM4 Arachis hypogaea HOM05D004588 ORTHO05D005365 2.6e-20 101.7 57 86.0
arahy.Tifrunner.gnm1.ann1.HQTU6U Arachis hypogaea HOM05D004588 ORTHO05D005365 3.4e-20 101.3 57 86.0
Potri.018G150100 Populus trichocarpa HOM05D004588 ORTHO05D005365 3.4e-20 101.3 57 86.0
Ciclev10006280m.g Citrus clementina HOM05D004588 ORTHO05D005365 4.5e-20 100.9 57 86.0
Glyma.07G155900 Glycine max HOM05D004588 ORTHO05D005365 4.5e-20 100.9 57 86.0
VMungo1383G1103 Vigna mungo HOM05D004588 ORTHO05D005365 4.5e-20 100.9 57 86.0
Actinidia38537 Actinidia chinensis HOM05D004588 ORTHO05D005365 5.9e-20 100.5 57 86.0
Ciclev10009986m.g Citrus clementina HOM05D004588 ORTHO05D005365 5.9e-20 100.5 57 86.0
Prupe.6G124600 Prunus persica HOM05D004588 ORTHO05D005365 5.9e-20 100.5 57 86.0
THA.LOC104798808 Tarenaya hassleriana HOM05D004588 ORTHO05D005365 5.9e-20 100.5 57 86.0
ATR0626G376 Amborella trichopoda HOM05D004588 ORTHO05D005365 7.6e-20 100.1 57 86.0
CDE04G0148 Ceratophyllum demersum HOM05D004588 ORTHO05D005365 7.6e-20 100.1 57 86.0
Atru.chr8.1086 Acer truncatum HOM05D004588 ORTHO05D005365 1.0e-19 99.8 57 86.0
Glyma.18G206300 Glycine max HOM05D004588 ORTHO05D005365 1.0e-19 99.8 57 84.2
ClCG07G006010 Citrullus lanatus HOM05D004588 ORTHO05D005365 1.3e-19 99.4 57 84.2
MELO3C026421.2 Cucumis melo HOM05D004588 ORTHO05D005365 1.3e-19 99.4 57 84.2
CsaV3_4G009740 Cucumis sativus L. HOM05D004588 ORTHO05D005365 1.3e-19 99.4 57 84.2
GSVIVG01034226001 Vitis vinifera HOM05D004588 ORTHO05D005365 1.3e-19 99.4 57 86.0
GSVIVG01034243001 Vitis vinifera HOM05D004588 ORTHO05D005365 1.3e-19 99.4 57 86.0
Actinidia29985 Actinidia chinensis HOM05D004588 ORTHO05D005365 1.7e-19 99.0 56 85.7
QL11p006982 Quercus lobata HOM05D004588 ORTHO05D005365 1.7e-19 99.0 57 84.2
TWI74G0566 Tripterygium wilfordii HOM05D004588 ORTHO05D005365 1.7e-19 99.0 57 84.2
CDE02G2168 Ceratophyllum demersum HOM05D002987 ORTHO05D003359 2.2e-19 98.6 54 88.9
Migut.J00858 Erythranthe guttata HOM05D004588 ORTHO05D005365 2.2e-19 98.6 57 84.2
FvH4_5g34540 Fragaria vesca HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 84.2
FAN04G2743 Fragaria x ananassa HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 84.2
FAN05G0480 Fragaria x ananassa HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 84.2
FAN08G2577 Fragaria x ananassa HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 84.2
FAN09G1784 Fragaria x ananassa HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 84.2
FAN18G1354 Fragaria x ananassa HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 84.2
MD03G1139600 Malus domestica HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 84.2
Sed0013564 Sechium edule HOM05D004588 ORTHO05D005365 2.9e-19 98.2 57 82.5
MSTRG.19411 Avicennia marina HOM05D004588 ORTHO05D005365 3.8e-19 97.8 57 84.2
MD11G1162200 Malus domestica HOM05D004588 ORTHO05D005365 3.8e-19 97.8 57 84.2
Nn5g26959 Nelumbo nucifera HOM05D004588 ORTHO05D005365 3.8e-19 97.8 57 82.5
PGR044G1699 Punica granatum HOM05D004588 ORTHO05D005365 3.8e-19 97.8 57 84.2
Hund04573 Selenicereus undatus HOM05D004588 ORTHO05D005365 3.8e-19 97.8 57 84.2
Aqoxy7G03968 Aquilegia oxysepala HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 82.5
CSS0028506 Camellia sinensis var. sinensis HOM05D004588 ORTHO05D005365 5.0e-19 97.4 54 87.0
AUR62002237 Chenopodium quinoa HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 84.2
AUR62015449 Chenopodium quinoa HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 84.2
Cc06_g23660 Coffea canephora HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 82.5
FAN14G2878 Fragaria x ananassa HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 84.2
Hma1.2p1_0391F.1_g142890 Hydrangea macrophylla HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 84.2
MBI13_g33575_MAGBIO Magnolia biondii HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 82.5
TAR626G1307 Trochodendron aralioides HOM05D004588 ORTHO05D005365 5.0e-19 97.4 57 84.2
Manes.01G180900 Manihot esculenta HOM05D004588 ORTHO05D005365 8.5e-19 96.7 57 82.5
RcHm_v2.0_Chr7g0235191 Rosa chinensis HOM05D004588 ORTHO05D005365 8.5e-19 96.7 57 82.5
SGA_v2.0_scaffold21G09593 Striga asiatica HOM05D004588 ORTHO05D005365 8.5e-19 96.7 57 82.5
SGA_v2.0_scaffold272G46369 Striga asiatica HOM05D004588 ORTHO05D005365 8.5e-19 96.7 57 82.5
THA.LOC104800355 Tarenaya hassleriana HOM05D004588 ORTHO05D005365 8.5e-19 96.7 57 78.9
unitig_26.g9124 Utricularia gibba HOM05D000513 ORTHO05D003825 8.5e-19 96.7 56 83.9
FAN04G2398 Fragaria x ananassa HOM05D004588 ORTHO05D005365 1.1e-18 96.3 54 87.0
Phvul.008G093100 Phaseolus vulgaris HOM05D004588 ORTHO05D005365 1.1e-18 96.3 57 82.5
Thecc.02G231300 Theobroma cacao HOM05D004588 ORTHO05D005365 1.1e-18 96.3 57 80.7
TWI53G1560 Tripterygium wilfordii HOM05D004588 ORTHO05D005365 1.1e-18 96.3 57 80.7
vmacro20736 Vaccinium macrocarpon HOM05D004588 ORTHO05D005365 1.4e-18 95.9 57 80.7
Dinv31498 Davidia involucrata HOM05D004588 ORTHO05D005365 1.9e-18 95.5 57 82.5
SalBow6G0192 Salvia bowleyana HOM05D004588 ORTHO05D005365 1.9e-18 95.5 57 82.5
HanXRQChr06g0184041 Helianthus annuus HOM05D004588 ORTHO05D005365 3.2e-18 94.7 57 80.7
Lsat_1_v5_gn_4_185681 Lactuca sativa HOM05D004588 ORTHO05D005365 3.2e-18 94.7 57 80.7
Atru.chr8.89 Acer truncatum HOM05D004588 ORTHO05D005365 4.2e-18 94.4 57 80.7
Cpa.g.sc91.70 Carica papaya HOM05D004588 ORTHO05D005365 4.2e-18 94.4 57 80.7
Prupe.1G001800 Prunus persica HOM05D004588 ORTHO05D005365 4.2e-18 94.4 57 82.5
COL.COLO4_31171 Corchorus olitorius HOM05D004588 ORTHO05D005365 5.5e-18 94.0 57 78.9
Glyma.01G125100 Glycine max HOM05D004588 ORTHO05D005365 5.5e-18 94.0 57 80.7
TAR383G0700 Trochodendron aralioides HOM05D004588 ORTHO05D005365 5.5e-18 94.0 68 72.1
Zm00001eb176930 Zea mays HOM05D004588 ORTHO05D005365 5.5e-18 94.0 57 80.7
DCAR_013469 Daucus carota HOM05D004588 ORTHO05D005365 7.2e-18 93.6 54 85.2
FAN13G2885 Fragaria x ananassa HOM05D004588 ORTHO05D005365 7.2e-18 93.6 57 80.7
PSO170G5232 Papaver somniferum HOM05D004588 ORTHO05D005365 7.2e-18 93.6 57 77.2
PSO407G0251 Papaver somniferum HOM05D004588 ORTHO05D005365 7.2e-18 93.6 57 77.2
Ah.07g207540 Amaranthus hybridus HOM05D004588 ORTHO05D005365 9.3e-18 93.2 57 78.9
CiPaw.01G111800 Carya illinoinensis HOM05D004588 ORTHO05D005365 9.3e-18 93.2 57 80.7
Duzib248G0295 Durio zibethinus HOM05D004588 ORTHO05D005365 9.3e-18 93.2 57 78.9
Oeu008630.1 Olea europaea HOM05D004588 ORTHO05D005365 1.6e-17 92.4 57 77.2
Os08g0359600 Oryza sativa ssp. japonica HOM05D004588 ORTHO05D005365 1.6e-17 92.4 57 78.9
Aa31LG10G4590 Aethionema arabicum HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 77.2
BcaNung06952 Brassica carinata HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 77.2
A05p30670 Brassica napus HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 77.2
C05p46550 Brassica napus HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 77.2
BolC5t33384H Brassica oleracea HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 77.2
BraA05t21909Z Brassica rapa HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 77.2
Nitab4.5_0000170g0150 Nicotiana tabacum HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 78.9
Peaxi162Scf00474g00216 Petunia axillaris HOM05D004588 ORTHO05D005365 2.1e-17 92.0 57 78.9
Gohir.A05G279932 Gossypium hirsutum HOM05D004588 ORTHO05D005365 2.7e-17 91.7 57 77.2
Nitab4.5_0004827g0050 Nicotiana tabacum HOM05D004588 ORTHO05D005365 2.7e-17 91.7 57 78.9
Aa31LG8G5720 Aethionema arabicum HOM05D004588 ORTHO05D005365 3.6e-17 91.3 57 77.2
AT1G49400 Arabidopsis thaliana HOM05D004588 ORTHO05D005365 3.6e-17 91.3 57 75.4
SEGI_39311 Sequoiadendron giganteum HOM05D004588 ORTHO05D005365 3.6e-17 91.3 57 77.2
Solyc12g009380.2 Solanum lycopersicum HOM05D004588 ORTHO05D005365 3.6e-17 91.3 57 78.9
Sopen12g004370 Solanum pennellii HOM05D004588 ORTHO05D005365 3.6e-17 91.3 57 78.9
PGSC0003DMG400002922 Solanum tuberosum HOM05D004588 ORTHO05D005365 3.6e-17 91.3 57 78.9
HPP92_001963 Vanilla planifolia HOM05D004588 ORTHO05D005365 4.6e-17 90.9 57 77.2
AL1G56520 Arabidopsis lyrata HOM05D004588 ORTHO05D005365 6.1e-17 90.5 57 75.4
AL1G56550 Arabidopsis lyrata HOM05D004588 ORTHO05D005365 6.1e-17 90.5 57 75.4
Carub.0001s3858 Capsella rubella HOM05D004588 ORTHO05D005365 6.1e-17 90.5 57 75.4
CARHR039400 Cardamine hirsuta HOM05D004588 ORTHO05D005365 6.1e-17 90.5 57 75.4
Oeu036964.1 Olea europaea HOM05D004588 ORTHO05D005365 6.1e-17 90.5 57 75.4
Sc15g0007280 Simmondsia chinensis HOM05D004588 ORTHO05D005365 6.1e-17 90.5 58 77.6
BcaB06g25942 Brassica carinata HOM05D004588 ORTHO05D005365 7.9e-17 90.1 57 75.4
Dinv12627 Davidia involucrata HOM05D004588 ORTHO05D005365 7.9e-17 90.1 57 77.2
Thhalv10021804m.g Eutrema salsugineum HOM05D004588 ORTHO05D005365 7.9e-17 90.1 57 75.4
Sp3g16980 Schrenkiella parvula HOM05D004588 ORTHO05D005365 7.9e-17 90.1 57 75.4
Zm00001eb041040 Zea mays HOM05D004588 ORTHO05D005365 7.9e-17 90.1 57 77.2
AL3G32270 Arabidopsis lyrata HOM05D004588 ORTHO05D005365 1.0e-16 89.7 57 75.4
arahy.Tifrunner.gnm1.ann1.2BL1F5 Arachis hypogaea HOM05D004588 ORTHO05D005365 1.0e-16 89.7 54 79.6
BcaB04g17345 Brassica carinata HOM05D004588 ORTHO05D005365 1.0e-16 89.7 57 75.4
C08p04210 Brassica napus HOM05D004588 ORTHO05D005365 1.0e-16 89.7 57 75.4
Thhalv10011874m.g Eutrema salsugineum HOM05D004588 ORTHO05D005365 1.0e-16 89.7 57 75.4
Sp1g36240 Schrenkiella parvula HOM05D004588 ORTHO05D005365 1.0e-16 89.7 57 75.4
SEGI_30295 Sequoiadendron giganteum HOM05D004588 ORTHO05D005365 1.0e-16 89.7 57 75.4
Gohir.D05G281600 Gossypium hirsutum HOM05D004588 ORTHO05D005365 1.8e-16 89.0 57 75.4
Gorai.009G295100 Gossypium raimondii HOM05D004588 ORTHO05D005365 1.8e-16 89.0 57 75.4
AT3G18880 Arabidopsis thaliana HOM05D004588 ORTHO05D005365 2.3e-16 88.6 57 73.7
Rhsim01G0103600 Rhododendron simsii HOM05D004588 ORTHO05D005365 1.1e-15 86.3 51 78.4
RhsimUnG0238800 Rhododendron simsii HOM05D004588 ORTHO05D005365 1.1e-15 86.3 51 78.4
ECA238G1741 Erigeron canadensis HOM05D004588 ORTHO05D005365 1.5e-15 85.9 57 75.4
Mapoly0128s0026 Marchantia polymorpha HOM05D004588 ORTHO05D005365 3.7e-14 81.3 76 56.6
AagrBONN_evm.TU.Sc2ySwM_362.494 Anthoceros agrestis HOM05D004588 ORTHO05D005365 9.1e-13 76.6 63 58.7
SMO230G0073 Selaginella moellendorffii HOM05D004588 ORTHO05D005365 9.1e-13 76.6 57 59.6
Pp3c1_39230 Physcomitrium patens HOM05D004588 ORTHO05D005365 7.7e-12 73.6 63 60.3
CBR_g18728 Chara braunii HOM05D004588 ORTHO05D005365 1.4e-10 69.3 57 57.9
Nitab4.5_0000073g0450 Nicotiana tabacum HOM05D004588 ORTHO05D005365 1.4e-10 69.3 43 79.1
BcaC07g37057 Brassica carinata HOM05D004588 ORTHO05D005365 9.4e-10 66.6 40 82.5
BolC8t47225H Brassica oleracea HOM05D004588 ORTHO05D005365 9.4e-10 66.6 40 82.5
MCO14G513 Micromonas commoda HOM05D004588 ORTHO05D005365 1.4e-08 62.8 63 47.6
arahy.Tifrunner.gnm1.ann1.8LR1I7 Arachis hypogaea HOM05D004588 ORTHO05D005365 3.9e-08 61.2 44 59.1
AUR62001361 Chenopodium quinoa HOM05D004588 ORTHO05D005365 2.8e-06 55.1 32 87.5


User provided reference genes

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