Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g160960 Pisum sativum HOM05D004086 ORTHO05D004641 0.0e+00 1238.0 628 100.0
Medtr5g019810 Medicago truncatula HOM05D004086 ORTHO05D004641 1.6e-245 852.8 633 70.6
TPR.G18816 Trifolium pratense HOM05D004086 ORTHO05D004641 1.1e-236 823.5 634 71.5
Ca_00390_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 4.5e-235 818.1 646 68.4
Glyma.11G009900 Glycine max HOM05D004086 ORTHO05D004641 6.6e-186 654.8 652 56.6
Medtr5g026040 Medicago truncatula HOM05D004086 ORTHO05D004641 5.6e-177 625.2 504 66.7
Lj5g0019705 Lotus japonicus HOM05D004086 ORTHO05D004641 1.4e-175 620.5 645 53.5
VMungo1215G0116 Vigna mungo HOM05D004086 ORTHO05D004641 3.1e-175 619.4 661 53.1
Phvul.002G040400 Phaseolus vulgaris HOM05D004086 ORTHO05D004641 2.8e-168 596.3 653 52.8
Lalb_Chr20g0123501 Lupinus albus HOM05D004086 ORTHO05D004641 3.1e-167 592.8 644 53.1
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 8.1e-160 568.2 505 64.6
arahy.Tifrunner.gnm1.ann1.4T6GLU Arachis hypogaea HOM05D004086 ORTHO05D004641 2.5e-137 493.4 662 46.7
CsaV3_4G005180 Cucumis sativus L. HOM05D004086 ORTHO05D004641 9.6e-137 491.5 655 43.8
MELO3C017544.2 Cucumis melo HOM05D004086 ORTHO05D004641 2.1e-136 490.3 649 45.1
arahy.Tifrunner.gnm1.ann1.FS5W7P Arachis hypogaea HOM05D004086 ORTHO05D004641 1.4e-135 487.6 670 45.7
TWI09G1017 Tripterygium wilfordii HOM05D004086 ORTHO05D004641 9.9e-134 481.5 647 43.1
Duzib264G0994 Durio zibethinus HOM05D004086 ORTHO05D004641 1.3e-133 481.1 658 43.5
Ciclev10025048m.g Citrus clementina HOM05D004086 ORTHO05D004641 4.9e-133 479.2 652 43.7
Potri.007G028600 Populus trichocarpa HOM05D004086 ORTHO05D004641 3.2e-132 476.5 652 43.4
Thecc.01G039100 Theobroma cacao HOM05D004086 ORTHO05D004641 2.1e-131 473.8 650 43.5
GSVIVG01018995001 Vitis vinifera HOM05D004086 ORTHO05D004641 7.9e-131 471.9 663 42.8
CANSAT01G2856 Cannabis sativa HOM05D004086 ORTHO05D004641 1.5e-129 467.6 656 45.0
THA.LOC104819797 Tarenaya hassleriana HOM05D004086 ORTHO05D004641 1.8e-127 460.7 627 44.3
Sabra07G0024800 Salix brachista HOM05D004086 ORTHO05D004641 3.4e-126 456.4 671 41.1
Gohir.D11G192200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 7.6e-126 455.3 651 43.0
Gorai.007G205200 Gossypium raimondii HOM05D004086 ORTHO05D004641 8.4e-125 451.8 651 42.9
Gohir.A11G185700 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.1e-124 451.4 656 42.7
Hma1.2p1_0400F.1_g144650 Hydrangea macrophylla HOM05D004086 ORTHO05D004641 2.5e-124 450.3 652 41.3
Sed0023254 Sechium edule HOM05D004086 ORTHO05D004641 2.5e-124 450.3 648 40.7
CSS0022456 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 6.0e-123 445.7 653 42.0
CSS0048181 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 6.0e-123 445.7 653 42.0
QL06p045466 Quercus lobata HOM05D004086 ORTHO05D004641 1.3e-122 444.5 650 41.7
Cc07_g09240 Coffea canephora HOM05D004086 ORTHO05D004641 1.8e-122 444.1 648 42.0
ClCG07G009030 Citrullus lanatus HOM05D004086 ORTHO05D004641 1.5e-121 441.0 629 42.1
MD02G1151400 Malus domestica HOM05D004086 ORTHO05D004641 5.7e-121 439.1 656 41.8
Gohir.D11G227980 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.6e-120 437.6 651 42.2
Manes.07G068600 Manihot esculenta HOM05D004086 ORTHO05D004641 2.2e-120 437.2 656 40.2
CiPaw.02G015600 Carya illinoinensis HOM05D004086 ORTHO05D004641 3.7e-120 436.4 643 42.1
Dinv39963 Davidia involucrata HOM05D004086 ORTHO05D004641 2.0e-118 430.6 643 41.4
Sp2g19840 Schrenkiella parvula HOM05D004086 ORTHO05D004641 2.0e-118 430.6 630 42.7
DCAR_025930 Daucus carota HOM05D004086 ORTHO05D004641 3.8e-117 426.4 636 41.8
vmacro07910 Vaccinium macrocarpon HOM05D004086 ORTHO05D004641 8.5e-117 425.2 662 40.3
BraA06t26744Z Brassica rapa HOM05D004086 ORTHO05D004641 1.4e-116 424.5 644 43.2
A06p38290 Brassica napus HOM05D004086 ORTHO05D004641 1.9e-116 424.1 644 43.0
Lj5A533G14 Lonicera japonica HOM05D004086 ORTHO05D004641 3.2e-116 423.3 585 43.9
Actinidia36545 Actinidia chinensis HOM05D004086 ORTHO05D004641 5.5e-116 422.5 639 40.8
Prupe.7G151600 Prunus persica HOM05D004086 ORTHO05D004641 2.1e-115 420.6 647 41.4
COL.COLO4_22111 Corchorus olitorius HOM05D004086 ORTHO05D004641 2.7e-115 420.2 637 40.3
BolC7t44527H Brassica oleracea HOM05D004086 ORTHO05D004641 2.3e-114 417.2 642 42.1
TAR628G1622 Trochodendron aralioides HOM05D004086 ORTHO05D004641 6.7e-114 415.6 667 40.9
RcHm_v2.0_Chr2g0102021 Rosa chinensis HOM05D004086 ORTHO05D004641 8.8e-114 415.2 652 41.4
MSTRG.23544 Avicennia marina HOM05D004086 ORTHO05D004641 5.7e-113 412.5 646 39.0
Nitab4.5_0008457g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 1.7e-112 411.0 644 40.5
AT5G49530 Arabidopsis thaliana HOM05D004086 ORTHO05D004641 2.8e-112 410.2 634 42.4
C07p39950 Brassica napus HOM05D004086 ORTHO05D004641 1.4e-111 407.9 638 42.0
Eucgr.H01260 Eucalyptus grandis HOM05D004086 ORTHO05D004641 3.8e-109 399.8 538 42.9
PGSC0003DMG400004762 Solanum tuberosum HOM05D004086 ORTHO05D004641 5.0e-109 399.4 623 40.0
Thhalv10003751m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 6.5e-109 399.1 635 40.6
FAN19G3131 Fragaria x ananassa HOM05D004086 ORTHO05D004641 6.5e-109 399.1 647 39.6
Gohir.D11G227900 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.9e-108 397.5 582 41.2
ECA232G4057 Erigeron canadensis HOM05D004086 ORTHO05D001499 3.2e-108 396.7 645 39.1
Hund05506 Selenicereus undatus HOM05D004086 ORTHO05D004641 3.2e-108 396.7 639 39.1
Ca_29955_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 4.2e-108 396.4 374 57.5
Sopen08g027080 Solanum pennellii HOM05D004086 ORTHO05D004641 5.5e-108 396.0 631 39.3
CARHR287960 Cardamine hirsuta HOM05D004086 ORTHO05D004641 1.2e-107 394.8 635 40.3
FAN26G0470 Fragaria x ananassa HOM05D004086 ORTHO05D004641 3.6e-107 393.3 666 38.6
Carub.0008s0941 Capsella rubella HOM05D004086 ORTHO05D004641 6.1e-107 392.5 639 41.8
CAN.G1058.29 Capsicum annuum HOM05D004086 ORTHO05D004641 6.1e-107 392.5 637 40.7
Actinidia12113 Actinidia chinensis HOM05D004086 ORTHO05D004641 1.4e-106 391.3 638 39.0
EL10Ac7g17738 Beta vulgaris HOM05D004086 ORTHO05D004641 1.4e-106 391.3 639 40.8
Solyc08g078600.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 8.8e-106 388.7 631 39.0
FvH4_1g13700 Fragaria vesca HOM05D004086 ORTHO05D004641 1.5e-105 387.9 655 38.8
FAN28G1508 Fragaria x ananassa HOM05D004086 ORTHO05D004641 8.2e-104 382.1 667 38.4
Atru.chr3.545 Acer truncatum HOM05D004086 ORTHO05D004641 1.4e-103 381.3 567 40.9
FAN23G2825 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.8e-103 380.9 670 38.1
Aa31LG11G8330 Aethionema arabicum HOM05D004086 ORTHO05D004641 3.8e-101 373.2 644 39.3
Ah.15g091580 Amaranthus hybridus HOM05D004086 ORTHO05D004641 5.0e-101 372.9 637 37.4
AUR62025406 Chenopodium quinoa HOM05D004086 ORTHO05D004641 1.4e-100 371.3 638 38.2
Nitab4.5_0010593g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 1.4e-100 371.3 709 36.2
HanXRQChr09g0262111 Helianthus annuus HOM05D004086 ORTHO05D004641 2.5e-100 370.5 627 37.8
Migut.H00181 Erythranthe guttata HOM05D004086 ORTHO05D004641 4.2e-100 369.8 640 38.1
Peaxi162Scf00515g00225 Petunia axillaris HOM05D004086 ORTHO05D004641 4.2e-100 369.8 639 39.7
SpUn0021_0010 Schrenkiella parvula HOM05D004086 ORTHO05D004641 5.5e-100 369.4 515 44.1
AL8G23320 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 2.7e-99 367.1 631 40.3
Oeu053005.1 Olea europaea HOM05D004086 ORTHO05D004641 1.8e-98 364.4 583 39.3
Lsat_1_v5_gn_4_150860 Lactuca sativa HOM05D004086 ORTHO05D004641 8.8e-98 362.1 656 38.0
AUR62008836 Chenopodium quinoa HOM05D004086 ORTHO05D004641 1.7e-96 357.8 634 37.2
ECA238G3830 Erigeron canadensis HOM05D004086 ORTHO05D004641 1.1e-95 355.1 638 35.9
Sopen02g030230 Solanum pennellii HOM05D004086 ORTHO05D004641 1.6e-91 341.3 635 36.2
Nn5g29538 Nelumbo nucifera HOM05D004086 ORTHO05D004641 8.0e-91 339.0 476 42.4
Solyc02g085560.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 8.0e-91 339.0 632 36.1
DCAR_023357 Daucus carota HOM05D004086 ORTHO05D004641 1.2e-89 335.1 619 36.3
COL.COLO4_14865 Corchorus olitorius HOM05D004086 ORTHO05D004641 7.5e-89 332.4 489 42.1
CAN.G358.119 Capsicum annuum HOM05D004086 ORTHO05D004641 2.2e-88 330.9 652 34.8
Rhsim03G0093700 Rhododendron simsii HOM05D004086 ORTHO05D004641 3.1e-87 327.0 654 36.4
PSO675G7346 Papaver somniferum HOM05D004086 ORTHO05D004641 9.4e-84 315.5 536 38.2
Thhalv10023969m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 1.6e-83 314.7 505 39.0
AL5G27650 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 2.4e-79 300.8 470 41.7
Aqoxy6G01048 Aquilegia oxysepala HOM05D004086 ORTHO05D004641 4.1e-79 300.1 671 33.7
Ah.15g091670 Amaranthus hybridus HOM05D004086 ORTHO05D004641 1.0e-77 295.4 453 39.5
PSO541G3560 Papaver somniferum HOM05D004086 ORTHO05D004641 5.0e-77 293.1 656 34.8
unitig_52.g17585 Utricularia gibba HOM05D004086 ORTHO05D004641 1.2e-70 271.9 527 36.4
Nitab4.5_0001279g0090 Nicotiana tabacum HOM05D004086 ORTHO05D004641 4.5e-70 270.0 428 39.0
MD15G1266000 Malus domestica HOM05D004086 ORTHO05D004641 1.5e-68 265.0 549 37.0
AagrBONN_evm.TU.Sc2ySwM_344.3508 Anthoceros agrestis HOM05D004086 ORTHO05D004641 4.0e-66 256.9 611 31.8
FvH4_2g10200 Fragaria vesca HOM05D004086 ORTHO05D004641 6.4e-64 249.6 492 35.8
Pp3c2_15450 Physcomitrium patens HOM05D004086 ORTHO05D004641 1.4e-63 248.4 633 31.9
ATR0064G058 Amborella trichopoda HOM05D004086 ORTHO05D004641 3.2e-63 247.3 624 31.6
Haze_15127 Corylus avellana HOM05D004086 ORTHO05D004641 9.2e-63 245.7 434 37.1
Nitab4.5_0004445g0020 Nicotiana tabacum HOM05D004086 ORTHO05D004641 2.0e-62 244.6 339 40.1
Haze_02099 Corylus avellana HOM05D004086 ORTHO05D004641 1.3e-61 241.9 648 30.6
SMO203G0104 Selaginella moellendorffii HOM05D004086 ORTHO05D004641 3.0e-61 240.7 582 31.8
HPP92_015988 Vanilla planifolia HOM05D004086 ORTHO05D004641 3.0e-61 240.7 604 31.0
Mapoly0113s0019 Marchantia polymorpha HOM05D004086 ORTHO05D004641 8.6e-61 239.2 672 29.6
CBR_g22032 Chara braunii HOM05D004086 ORTHO05D004641 5.1e-53 213.4 604 30.0
CBR_g50911 Chara braunii HOM05D004086 ORTHO05D004641 9.5e-52 209.1 609 29.1
CBR_g50913 Chara braunii HOM05D004086 ORTHO05D004641 9.5e-52 209.1 609 29.1
Cpa.g.sc353.3 Carica papaya HOM05D004086 ORTHO05D004641 1.1e-50 205.7 387 35.7
CDE05G2435 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 3.2e-47 194.1 346 35.8
Sc17g0002710 Simmondsia chinensis HOM05D004086 ORTHO05D004641 1.2e-46 192.2 312 38.1
Haze_02100 Corylus avellana HOM05D004086 ORTHO05D004641 6.0e-46 189.9 271 43.5
Lsat_1_v5_gn_4_150881 Lactuca sativa HOM05D004086 ORTHO05D004641 7.8e-46 189.5 525 30.1
BcaC03g17736 Brassica carinata HOM05D004086 ORTHO05D004641 6.6e-45 186.4 322 39.1
AL253U10010 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 2.8e-43 181.0 258 46.5
CDE10G1264 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 4.7e-43 180.3 625 28.6
HPP92_026151 Vanilla planifolia HOM05D004086 ORTHO05D004641 4.4e-41 173.7 439 30.5
A02p38220 Brassica napus HOM05D004086 ORTHO05D004641 1.3e-40 172.2 221 44.8
Cpa.g.sc353.1 Carica papaya HOM05D004086 ORTHO05D004641 6.6e-37 159.8 236 42.8
Zm00001eb269010 Zea mays HOM05D004086 ORTHO05D004641 6.6e-37 159.8 219 42.0
CARHR050710 Cardamine hirsuta HOM05D004086 ORTHO05D004641 2.8e-35 154.5 223 39.5
FAN24G1278 Fragaria x ananassa HOM05D004086 ORTHO05D004641 2.8e-35 154.5 464 30.8
CDE10G0302 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 6.2e-35 153.3 240 39.2
Haze_15116 Corylus avellana HOM05D004086 ORTHO05D004641 1.5e-33 148.7 245 42.4
C02p57460 Brassica napus HOM05D004086 ORTHO05D004641 2.9e-32 144.4 322 34.5
PSO017G0414 Papaver somniferum HOM05D004086 ORTHO05D004641 3.0e-29 134.4 418 27.5
Glyma.01G232951 Glycine max HOM05D001514 ORTHO05D002956 2.5e-28 131.3 214 40.7
CDE05G1436 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 7.3e-28 129.8 146 45.9
PGSC0003DMG400012686 Solanum tuberosum HOM05D004086 ORTHO05D004641 4.8e-27 127.1 203 34.5
BcaB07g34160 Brassica carinata HOM05D004086 ORTHO05D004641 1.1e-23 115.9 123 48.0
Ca_29956_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 4.0e-18 97.4 50 90.0
SHI06750 Sapria himalayana HOM05D004086 ORTHO05D004641 4.0e-18 97.4 117 44.4
BolC2t11821H Brassica oleracea HOM05D004086 ORTHO05D004641 5.8e-17 93.6 177 37.9
AUR62025404 Chenopodium quinoa HOM05D000200 ORTHO05D000262 1.7e-16 92.0 200 31.5
SHI06749 Sapria himalayana HOM05D004086 ORTHO05D004641 2.9e-16 91.3 85 51.8
SEGI_33702 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 2.9e-16 91.3 291 29.2
Oeu053017.4 Olea europaea HOM05D004086 ORTHO05D004641 4.9e-16 90.5 103 43.7
Ah.15g091620 Amaranthus hybridus HOM05D004086 ORTHO05D004641 2.5e-15 88.2 103 45.6
SEGI_29880 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 1.3e-13 82.4 80 51.2
Cre10.g454650 Chlamydomonas reinhardtii HOM05D004086 ORTHO05D004641 2.3e-13 81.6 161 35.4
SEGI_36884 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 2.3e-13 81.6 204 39.2
Gohir.A11G236200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.1e-12 79.3 86 51.2
CDE10G0017 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 3.3e-12 77.8 179 34.1
MELO3C034917.2 Cucumis melo HOM05D004086 ORTHO05D004641 1.1e-10 72.8 64 51.6
CARHR050700 Cardamine hirsuta HOM05D004086 ORTHO05D004641 9.0e-10 69.7 69 52.2
SEGI_37045 Sequoiadendron giganteum HOM05D037714 ORTHO05D004641 7.6e-09 66.6 131 32.8
Oeu053007.1 Olea europaea HOM05D004086 ORTHO05D004641 1.9e-07 62.0 151 27.8
Oeu014919.1 Olea europaea HOM05D004086 ORTHO05D004641 5.5e-07 60.5 181 31.5
SEGI_38277 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 5.5e-07 60.5 112 36.6


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