Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g150520 Pisum sativum HOM05D001343 ORTHO05D007223 9.1e-165 584.3 526 100.0
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 1.1e-122 444.5 529 76.0
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 6.9e-112 408.7 512 67.6
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 1.9e-109 400.6 517 70.8
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 9.6e-106 388.3 407 73.7
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 6.9e-104 382.1 527 65.3
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 9.0e-104 381.7 569 71.4
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 1.7e-102 377.5 407 74.0
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 3.5e-100 369.8 531 71.8
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 4.5e-95 352.8 397 71.3
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 3.5e-92 343.2 527 73.6
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 3.5e-92 343.2 527 73.6
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 3.0e-83 313.5 527 62.6
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 8.2e-81 305.4 557 54.8
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 5.5e-77 292.7 516 60.9
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 7.2e-77 292.4 522 64.2
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 2.7e-76 290.4 527 52.0
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 2.8e-73 280.4 524 56.3
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 1.8e-72 277.7 533 50.8
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 6.9e-72 275.8 527 51.0
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 1.3e-70 271.6 527 54.5
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 6.1e-68 262.7 501 49.3
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 1.5e-66 258.1 527 50.7
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 2.6e-66 257.3 528 54.4
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 1.3e-65 255.0 397 65.7
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.7e-65 254.6 510 61.4
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 4.8e-65 253.1 511 63.2
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 6.3e-65 252.7 535 52.1
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 2.4e-64 250.8 527 49.7
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 2.6e-63 247.3 509 58.3
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 3.5e-63 246.9 507 57.0
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 2.2e-62 244.2 392 64.5
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 6.5e-62 242.7 512 58.2
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 6.5e-62 242.7 512 58.6
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 8.5e-62 242.3 466 59.2
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 2.5e-61 240.7 528 58.5
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 4.2e-61 240.0 493 48.7
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 7.2e-61 239.2 493 48.9
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 2.1e-60 237.7 530 50.2
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 2.1e-60 237.7 485 54.0
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 2.1e-60 237.7 461 52.1
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 1.8e-59 234.6 527 53.1
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 2.3e-59 234.2 524 40.8
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 3.0e-59 233.8 397 62.5
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 1.1e-58 231.9 527 52.8
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 1.1e-58 231.9 515 53.6
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 2.6e-58 230.7 523 49.1
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 4.4e-58 229.9 527 52.6
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 7.5e-58 229.2 484 54.8
RcHm_v2.0_Chr2g0097461 Rosa chinensis HOM05D001343 ORTHO05D007223 7.5e-58 229.2 508 61.6
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 1.7e-57 228.0 530 53.2
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 1.7e-57 228.0 515 57.3
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 2.2e-57 227.6 466 51.9
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 1.1e-56 225.3 466 51.7
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 3.1e-56 223.8 524 52.3
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 4.1e-56 223.4 467 61.7
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 4.1e-56 223.4 467 61.7
RcHm_v2.0_Chr2g0097581 Rosa chinensis HOM05D001343 ORTHO05D007223 1.6e-55 221.5 497 62.0
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 1.6e-55 221.5 529 48.0
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 1.0e-54 218.8 518 45.0
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 1.3e-54 218.4 467 61.0
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 1.3e-54 218.4 499 57.9
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 2.2e-54 217.6 407 52.3
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 3.8e-54 216.9 505 57.6
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 1.1e-53 215.3 497 53.5
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 1.9e-53 214.5 497 53.3
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 1.2e-52 211.8 516 38.8
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 1.2e-52 211.8 510 46.7
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 2.7e-52 210.7 544 44.5
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 2.7e-52 210.7 533 50.3
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 2.3e-51 207.6 489 43.1
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 1.2e-50 205.3 502 51.6
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 1.2e-50 205.3 403 59.3
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 1.5e-50 204.9 505 45.7
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 2.0e-50 204.5 507 49.7
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 3.4e-50 203.8 482 53.1
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 5.7e-50 203.0 512 40.0
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 9.8e-50 202.2 486 51.2
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 2.2e-49 201.1 512 45.1
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 4.8e-49 199.9 528 44.1
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 6.3e-49 199.5 502 49.4
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 5.4e-48 196.4 477 56.6
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 7.0e-48 196.1 527 63.8
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 1.2e-47 195.3 467 57.2
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 1.6e-47 194.9 586 52.0
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 5.9e-47 193.0 531 43.3
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 1.3e-46 191.8 485 50.7
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 1.9e-45 188.0 513 45.4
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 1.9e-45 188.0 497 56.7
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 4.2e-45 186.8 524 55.0
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 8.0e-44 182.6 233 50.2
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 5.7e-42 176.4 312 78.5
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 1.3e-41 175.3 524 52.9
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 3.1e-40 170.6 491 45.2
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 5.9e-39 166.4 484 46.5
Actinidia26548 Actinidia chinensis HOM05D001343 ORTHO05D007223 1.4e-35 155.2 115 71.3
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 6.8e-35 152.9 404 42.6
Migut.L00927 Erythranthe guttata HOM05D001343 ORTHO05D007223 9.8e-34 149.1 389 54.5
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 8.9e-27 125.9 476 43.5
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 3.4e-26 124.0 246 47.6
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 8.3e-25 119.4 515 32.4
CDE07G1287 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 5.4e-24 116.7 115 57.4
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 2.0e-23 114.8 524 47.3
Cpa.g.sc1414.4 Carica papaya HOM05D001343 ORTHO05D007223 1.1e-21 109.0 121 51.2
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 1.6e-20 105.1 346 27.7
RcHm_v2.0_Chr6g0253501 Rosa chinensis HOM05D001343 ORTHO05D007223 1.8e-19 101.7 229 56.3
Oeu032010.1 Olea europaea HOM05D001343 ORTHO05D007223 2.6e-18 97.8 163 43.6
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 2.9e-17 94.4 116 44.8
Aa31LG1G14520 Aethionema arabicum HOM05D001343 ORTHO05D007223 3.7e-17 94.0 151 42.4
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 3.5e-15 87.4 517 40.4
Actinidia26547 Actinidia chinensis HOM05D001343 ORTHO05D007223 4.6e-15 87.0 160 41.2
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 3.9e-14 84.0 360 41.9
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 2.5e-13 81.3 168 35.7
AL472U10010 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 6.2e-12 76.6 144 37.5
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 2.0e-10 71.6 87 43.7
CDE06G1191 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 2.6e-10 71.2 97 41.2
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 1.9e-08 65.1 351 22.8
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 4.6e-07 60.5 47 68.1


User provided reference genes

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