Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g145520 Pisum sativum HOM05D000827 ORTHO05D001318 5.7e-40 167.5 113 100.0
Ca_25044_v3 Cicer arietinum L. HOM05D000827 ORTHO05D001318 1.9e-19 99.4 89 59.6
TPR.G8987 Trifolium pratense HOM05D000827 ORTHO05D001318 2.3e-17 92.4 94 76.6
Medtr5g025500 Medicago truncatula HOM05D000827 ORTHO05D001318 1.2e-16 90.1 93 77.4
Glyma.11G090400 Glycine max HOM05D000827 ORTHO05D001318 7.5e-16 87.4 91 75.8
Lj2g0023362 Lotus japonicus HOM05D000827 ORTHO05D001318 7.5e-16 87.4 91 52.7
arahy.Tifrunner.gnm1.ann1.046HV4 Arachis hypogaea HOM05D000827 ORTHO05D001318 3.7e-15 85.1 94 76.6
arahy.Tifrunner.gnm1.ann1.2I1ZFA Arachis hypogaea HOM05D000827 ORTHO05D001318 3.7e-15 85.1 94 76.6
Glyma.01G154200 Glycine max HOM05D000827 ORTHO05D001318 1.9e-14 82.8 91 60.4
Lalb_Chr05g0215071 Lupinus albus HOM05D000827 ORTHO05D001318 7.0e-14 80.9 89 53.9
Phvul.002G121400 Phaseolus vulgaris HOM05D000827 ORTHO05D001318 7.0e-14 80.9 86 54.7
Lalb_Chr16g0380361 Lupinus albus HOM05D000827 ORTHO05D001318 1.2e-13 80.1 94 52.1
VMungo1215G3320 Vigna mungo HOM05D000827 ORTHO05D001318 1.2e-13 80.1 90 53.3
Dinv37426 Davidia involucrata HOM05D000827 ORTHO05D001318 2.0e-08 62.8 85 48.2
TWI32G0689 Tripterygium wilfordii HOM05D000827 ORTHO05D001318 2.0e-08 62.8 48 62.5
CiPaw.12G054400 Carya illinoinensis HOM05D000827 ORTHO05D001318 2.6e-08 62.4 49 59.2
COL.COLO4_11280 Corchorus olitorius HOM05D000827 ORTHO05D001318 2.6e-08 62.4 41 63.4
HanXRQChr01g0025031 Helianthus annuus HOM05D000827 ORTHO05D001318 2.6e-08 62.4 40 75.0
PGR042G0057 Punica granatum HOM05D000827 ORTHO05D001318 2.6e-08 62.4 44 61.4
CANSAT80G2464 Cannabis sativa HOM05D000827 ORTHO05D001318 4.4e-08 61.6 45 57.8
unitig_26.g8845 Utricularia gibba HOM05D000827 ORTHO05D001318 4.4e-08 61.6 50 58.0
Aa31LG9G15740 Aethionema arabicum HOM05D000827 ORTHO05D001318 5.8e-08 61.2 49 61.2
TAR629G0081 Trochodendron aralioides HOM05D000827 ORTHO05D001318 5.8e-08 61.2 40 67.5
GSVIVG01036871001 Vitis vinifera HOM05D000827 ORTHO05D001318 5.8e-08 61.2 49 63.3
Nn1g09343 Nelumbo nucifera HOM05D000827 ORTHO05D001318 7.5e-08 60.8 50 60.0
TWI34G0874 Tripterygium wilfordii HOM05D000827 ORTHO05D001318 7.5e-08 60.8 48 58.3
unitig_0.g1359 Utricularia gibba HOM05D000827 ORTHO05D001318 7.5e-08 60.8 42 61.9
ECA233G5913 Erigeron canadensis HOM05D000827 ORTHO05D001318 9.9e-08 60.5 47 59.6
GSVIVG01019325001 Vitis vinifera HOM05D000827 ORTHO05D001318 9.9e-08 60.5 42 66.7
Atru.chr8.2652 Acer truncatum HOM05D000827 ORTHO05D001318 1.3e-07 60.1 40 65.0
Carub.0004s1729 Capsella rubella HOM05D000827 ORTHO05D001318 1.7e-07 59.7 44 65.9
Gohir.D08G170400 Gossypium hirsutum HOM05D000827 ORTHO05D001318 1.7e-07 59.7 40 55.0
AT2G35605 Arabidopsis thaliana HOM05D000827 ORTHO05D001318 2.2e-07 59.3 44 65.9
Cfa012293 Carpinus fangiana HOM05D000827 ORTHO05D001318 2.2e-07 59.3 45 60.0
Nitab4.5_0016158g0010 Nicotiana tabacum HOM05D000827 ORTHO05D001318 2.2e-07 59.3 40 65.0
QL04p053399 Quercus lobata HOM05D000827 ORTHO05D001318 2.2e-07 59.3 48 52.1
TAR636G2815 Trochodendron aralioides HOM05D000827 ORTHO05D001318 2.2e-07 59.3 77 46.8
vmacro13599 Vaccinium macrocarpon HOM05D000827 ORTHO05D001318 2.2e-07 59.3 40 62.5
AL4G31640 Arabidopsis lyrata HOM05D000827 ORTHO05D001318 2.9e-07 58.9 44 65.9
Gohir.D08G238400 Gossypium hirsutum HOM05D000827 ORTHO05D001318 2.9e-07 58.9 40 65.0
Gorai.004G177900 Gossypium raimondii HOM05D000827 ORTHO05D001318 2.9e-07 58.9 40 55.0
AUR62015622 Chenopodium quinoa HOM05D000827 ORTHO05D001318 3.7e-07 58.5 52 57.7
Gohir.A08G149400 Gossypium hirsutum HOM05D000827 ORTHO05D001318 3.7e-07 58.5 40 55.0
Sc22g0002230 Simmondsia chinensis HOM05D000827 ORTHO05D001318 3.7e-07 58.5 49 57.1
COL.COLO4_21419 Corchorus olitorius HOM05D000827 ORTHO05D001318 4.9e-07 58.2 48 54.2
ATR0568G208 Amborella trichopoda HOM05D000827 ORTHO05D001318 6.4e-07 57.8 45 55.6
CSS0035652 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 6.4e-07 57.8 49 53.1
CSS0045636 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 6.4e-07 57.8 49 53.1
CARHR129790 Cardamine hirsuta HOM05D000827 ORTHO05D001318 6.4e-07 57.8 44 61.4
COL.COLO4_21418 Corchorus olitorius HOM05D000827 ORTHO05D001318 6.4e-07 57.8 47 55.3
Duzib177G0213 Durio zibethinus HOM05D000827 ORTHO05D001318 8.3e-07 57.4 40 65.0
Thhalv10017454m.g Eutrema salsugineum HOM05D000827 ORTHO05D001318 8.3e-07 57.4 44 61.4
Lsat_1_v5_gn_6_17261 Lactuca sativa HOM05D000827 ORTHO05D001318 8.3e-07 57.4 40 67.5
Nitab4.5_0002244g0100 Nicotiana tabacum HOM05D000827 ORTHO05D001318 1.1e-06 57.0 46 63.0
Cpa.g.sc73.28 Carica papaya HOM05D000827 ORTHO05D001318 1.4e-06 56.6 44 56.8
Gorai.004G253900 Gossypium raimondii HOM05D000827 ORTHO05D001318 1.4e-06 56.6 40 62.5
Nitab4.5_0000030g0470 Nicotiana tabacum HOM05D000827 ORTHO05D001318 1.4e-06 56.6 40 65.0
Thecc.05G234600 Theobroma cacao HOM05D000827 ORTHO05D001318 1.4e-06 56.6 40 62.5
MSTRG.17081 Avicennia marina HOM05D000827 ORTHO05D001318 1.9e-06 56.2 42 61.9
EL10Ac4g08090 Beta vulgaris HOM05D000827 ORTHO05D001318 1.9e-06 56.2 40 65.0
Nitab4.5_0001175g0150 Nicotiana tabacum HOM05D000827 ORTHO05D001318 1.9e-06 56.2 40 62.5
Rhsim07G0047800 Rhododendron simsii HOM05D000827 ORTHO05D001318 1.9e-06 56.2 40 62.5
Actinidia31732 Actinidia chinensis HOM05D000827 ORTHO05D001318 2.4e-06 55.8 50 50.0
Dinv43520 Davidia involucrata HOM05D000827 ORTHO05D001318 2.4e-06 55.8 40 62.5
Peaxi162Scf00045g00722 Petunia axillaris HOM05D000827 ORTHO05D001318 2.4e-06 55.8 40 60.0
Ciclev10033040m.g Citrus clementina HOM05D000827 ORTHO05D001318 3.2e-06 55.5 53 47.2
Duzib177G0432 Durio zibethinus HOM05D000827 ORTHO05D001318 3.2e-06 55.5 40 62.5
MSTRG.20628 Avicennia marina HOM05D000827 ORTHO05D001318 4.1e-06 55.1 42 54.8
SGA_v2.0_scaffold98G29374 Striga asiatica HOM05D000827 ORTHO05D001318 4.1e-06 55.1 42 54.8
THA.LOC104814391 Tarenaya hassleriana HOM05D000827 ORTHO05D001318 4.1e-06 55.1 40 60.0
vmacro17920 Vaccinium macrocarpon HOM05D000827 ORTHO05D001576 4.1e-06 55.1 49 49.0
HPP92_022746 Vanilla planifolia HOM05D005374 ORTHO05D006534 4.1e-06 55.1 43 55.8
PSO017G6582 Papaver somniferum HOM05D000827 ORTHO05D001318 5.4e-06 54.7 41 63.4
PSO063G1923 Papaver somniferum HOM05D000827 ORTHO05D001318 5.4e-06 54.7 41 63.4
Solyc08g075400.3 Solanum lycopersicum HOM05D000827 ORTHO05D001318 5.4e-06 54.7 40 62.5
BraA05t21892Z Brassica rapa HOM05D000827 ORTHO05D001576 7.1e-06 54.3 44 56.8
Ciclev10013159m.g Citrus clementina HOM05D000827 ORTHO05D001318 7.1e-06 54.3 44 50.0
Hma1.2p1_0680F.1_g202390 Hydrangea macrophylla HOM05D000827 ORTHO05D001318 7.1e-06 54.3 89 42.7
Nitab4.5_0000792g0150 Nicotiana tabacum HOM05D000827 ORTHO05D001318 7.1e-06 54.3 49 53.1
PGR042G3744 Punica granatum HOM05D000827 ORTHO05D001318 7.1e-06 54.3 40 57.5
SalBow5G5239 Salvia bowleyana HOM05D000827 ORTHO05D001318 7.1e-06 54.3 40 60.0
Thecc.03G319100 Theobroma cacao HOM05D000827 ORTHO05D001318 7.1e-06 54.3 40 55.0
CSS0014939 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 9.2e-06 53.9 46 52.2
CSS0035225 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 9.2e-06 53.9 40 57.5
Gohir.D11G237200 Gossypium hirsutum HOM05D000827 ORTHO05D001318 9.2e-06 53.9 53 47.2
Gorai.007G250300 Gossypium raimondii HOM05D000827 ORTHO05D001318 9.2e-06 53.9 40 55.0
Oeu020239.1 Olea europaea HOM05D000827 ORTHO05D001318 9.2e-06 53.9 44 52.3
Peaxi162Scf00907g00019 Petunia axillaris HOM05D000827 ORTHO05D001318 9.2e-06 53.9 48 52.1


User provided reference genes

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