Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g145480 Pisum sativum HOM05D008997 ORTHO05D011051 1.7e-67 259.2 135 100.0
Medtr5g025520 Medicago truncatula HOM05D008997 ORTHO05D011051 3.5e-60 235.0 135 92.6
Ca_25045_v3 Cicer arietinum L. HOM05D008997 ORTHO05D011051 5.6e-58 227.6 126 93.7
Phvul.002G121500 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 9.2e-53 210.3 124 84.7
Phvul.004G038900 Phaseolus vulgaris HOM05D008997 ORTHO05D011051 2.0e-52 209.1 124 84.7
VMungo0464G1626 Vigna mungo HOM05D008997 ORTHO05D011051 6.0e-52 207.6 125 85.6
Lalb_Chr09g0324991 Lupinus albus HOM05D008997 ORTHO05D011051 2.3e-51 205.7 125 82.4
Lalb_Chr05g0215081 Lupinus albus HOM05D008997 ORTHO05D011051 9.5e-50 200.3 125 80.0
TPR.G8981 Trifolium pratense HOM05D008997 ORTHO05D011051 1.4e-48 196.4 136 76.5
Lj2g0013331 Lotus japonicus HOM05D008997 ORTHO05D011051 2.3e-48 195.7 122 82.8
Glyma.11G090500 Glycine max HOM05D008997 ORTHO05D011051 1.7e-46 189.5 125 77.6
arahy.Tifrunner.gnm1.ann1.G1G4QR Arachis hypogaea HOM05D008997 ORTHO05D011051 1.0e-35 153.7 155 56.8
arahy.Tifrunner.gnm1.ann1.QSM4Y5 Arachis hypogaea HOM05D008997 ORTHO05D011051 1.0e-35 153.7 155 56.8
VMungo1215G3078 Vigna mungo HOM05D008997 ORTHO05D011051 4.8e-25 118.2 124 57.3
CiPaw.11G075100 Carya illinoinensis HOM05D008997 ORTHO05D011051 3.1e-24 115.5 137 49.6
QL12p004181 Quercus lobata HOM05D008997 ORTHO05D011051 6.7e-19 97.8 138 44.9
Prupe.1G353500 Prunus persica HOM05D008997 ORTHO05D011051 4.3e-18 95.1 135 43.7
MD08G1001500 Malus domestica HOM05D008997 ORTHO05D011051 3.1e-16 89.0 139 41.0
Sed0009134 Sechium edule HOM05D008997 ORTHO05D011051 9.0e-16 87.4 81 51.9
MD15G1000800 Malus domestica HOM05D008997 ORTHO05D011051 1.2e-15 87.0 139 40.3
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.5e-15 85.1 136 43.4
RcHm_v2.0_Chr6g0304331 Rosa chinensis HOM05D008997 ORTHO05D011051 5.8e-15 84.7 129 43.4
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 9.9e-15 84.0 137 41.6
FAN21G1189 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.7e-14 83.2 137 42.3
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 1.7e-14 83.2 121 43.8
FvH4_2g37377 Fragaria vesca HOM05D008997 ORTHO05D011051 2.2e-14 82.8 127 42.5
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.2e-14 82.8 143 41.3
FAN21G1803 Fragaria x ananassa HOM05D008997 ORTHO05D011051 4.9e-14 81.6 127 42.5
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.4e-13 80.1 127 41.7
Atru.chr8.2628 Acer truncatum HOM05D008997 ORTHO05D011051 9.3e-13 77.4 102 42.2
Ciclev10013116m.g Citrus clementina HOM05D008997 ORTHO05D011051 1.6e-12 76.6 70 52.9
PGR031G0389 Punica granatum HOM05D008997 ORTHO05D011051 1.6e-12 76.6 97 43.3
Eucgr.D02561 Eucalyptus grandis HOM05D008997 ORTHO05D011051 7.9e-12 74.3 85 47.1
FAN21G1848 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.1e-10 70.5 142 37.3
FAN27G1108 Fragaria x ananassa HOM05D008997 ORTHO05D011051 1.9e-10 69.7 142 37.3
COL.COLO4_11281 Corchorus olitorius HOM05D008997 ORTHO05D011051 2.5e-10 69.3 103 38.8
Thecc.03G319000 Theobroma cacao HOM05D008997 ORTHO05D011051 2.8e-09 65.9 100 38.0
Manes.10G091000 Manihot esculenta HOM05D008997 ORTHO05D011051 1.8e-08 63.2 67 43.3
Potri.005G078400 Populus trichocarpa HOM05D008997 ORTHO05D011051 1.8e-08 63.2 109 35.8
Sabra05G0064400 Salix brachista HOM05D008997 ORTHO05D011051 2.4e-08 62.8 109 34.9
Ca_25044_v3 Cicer arietinum L. HOM05D000827 ORTHO05D001318 1.5e-07 60.1 98 34.7
Glyma.01G154200 Glycine max HOM05D000827 ORTHO05D001318 2.6e-07 59.3 69 40.6
SGA_v2.0_scaffold98G29374 Striga asiatica HOM05D000827 ORTHO05D001318 3.4e-07 58.9 77 36.4
Glyma.11G090400 Glycine max HOM05D000827 ORTHO05D001318 4.5e-07 58.5 69 39.1
THA.LOC104798526 Tarenaya hassleriana HOM05D013199 ORTHO05D015353 5.8e-07 58.2 97 34.0
CSS0043160 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001318 1.0e-06 57.4 83 33.7
Potri.009G092200 Populus trichocarpa HOM05D000827 ORTHO05D001318 1.7e-06 56.6 77 35.1
Ciclev10033040m.g Citrus clementina HOM05D000827 ORTHO05D001318 2.2e-06 56.2 81 34.6
Potri.001G297400 Populus trichocarpa HOM05D000827 ORTHO05D001318 2.2e-06 56.2 101 28.7
Sabra09G0070900 Salix brachista HOM05D000827 ORTHO05D001318 2.2e-06 56.2 77 35.1
Thecc.03G319100 Theobroma cacao HOM05D000827 ORTHO05D001318 2.2e-06 56.2 98 31.6
CANSAT80G2464 Cannabis sativa HOM05D000827 ORTHO05D001318 2.9e-06 55.8 78 34.6
Medtr5g025500 Medicago truncatula HOM05D000827 ORTHO05D001318 2.9e-06 55.8 77 37.7
Sabra16G0186400 Salix brachista HOM05D000827 ORTHO05D001318 2.9e-06 55.8 74 35.1
Cc08_g05790 Coffea canephora HOM05D000827 ORTHO05D001318 3.8e-06 55.5 106 32.1
ClCG06G000610 Citrullus lanatus HOM05D000827 ORTHO05D001318 4.9e-06 55.1 98 34.7
TAR629G0081 Trochodendron aralioides HOM05D000827 ORTHO05D001318 4.9e-06 55.1 102 28.4
MELO3C018505.2 Cucumis melo HOM05D000827 ORTHO05D001318 6.5e-06 54.7 77 36.4
Lj2g0023362 Lotus japonicus HOM05D000827 ORTHO05D001318 6.5e-06 54.7 87 34.5
Gorai.004G177900 Gossypium raimondii HOM05D000827 ORTHO05D001318 8.4e-06 54.3 67 38.8
GSVIVG01036871001 Vitis vinifera HOM05D000827 ORTHO05D001318 8.4e-06 54.3 101 34.7


User provided reference genes

Program Settings