Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 1.7e-91 339.3 171 100.0
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.6e-70 268.5 171 80.7
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 6.2e-62 241.1 171 74.9
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 7.3e-55 217.6 172 70.3
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 5.2e-53 211.5 170 68.2
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 3.9e-48 195.3 171 63.2
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 1.6e-46 189.9 174 63.8
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 6.2e-46 188.0 172 62.8
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 1.8e-45 186.4 175 60.6
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 1.7e-32 143.3 169 51.5
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 8.1e-30 134.4 169 49.1
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 2.4e-29 132.9 171 50.3
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 3.1e-29 132.5 172 47.1
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 6.9e-29 131.3 170 48.2
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 4.5e-28 128.6 171 46.2
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 4.9e-27 125.2 174 46.6
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 1.9e-26 123.2 150 48.0
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 3.2e-26 122.5 150 47.3
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.1e-25 119.8 175 42.3
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.1e-25 119.8 175 42.3
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 5.1e-24 115.2 164 44.5
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.9e-23 113.2 173 42.2
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 1.9e-23 113.2 176 45.5
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 4.3e-23 112.1 164 45.1
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.3e-22 110.5 173 42.2
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.8e-22 109.4 148 48.6
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 3.7e-22 109.0 173 45.1
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 3.7e-22 109.0 148 48.6
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 6.2e-22 108.2 158 43.7
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 6.2e-22 108.2 155 41.9
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 8.1e-22 107.8 153 45.8
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 1.8e-21 106.7 137 48.2
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.2e-20 104.0 148 47.3
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.3e-19 100.5 163 38.7
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 1.7e-19 100.1 175 41.7
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.4e-18 97.1 176 42.6
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.2e-18 95.9 172 38.4
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 2.7e-17 92.8 166 36.7
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 3.5e-17 92.4 145 39.3
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 3.5e-17 92.4 173 38.2
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 4.6e-17 92.0 168 41.1
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 6.0e-17 91.7 186 36.0
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 7.9e-17 91.3 168 41.1
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 1.0e-16 90.9 144 38.2
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 3.0e-16 89.4 175 36.6
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 8.7e-16 87.8 149 39.6
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.1e-15 87.4 91 50.5
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 1.9e-15 86.7 157 38.2
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 2.5e-15 86.3 158 38.6
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.3e-15 85.9 160 36.9
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 4.3e-15 85.5 174 39.7
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 5.7e-15 85.1 141 40.4
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 7.4e-15 84.7 142 40.8
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 2.1e-14 83.2 182 37.9
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 4.8e-14 82.0 165 36.4
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.1e-13 79.3 118 39.8
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 6.9e-13 78.2 174 35.1
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 1.2e-12 77.4 165 35.2
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 2.6e-12 76.3 161 34.2
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 3.4e-12 75.9 135 37.0
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 5.8e-12 75.1 84 47.6
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.0e-11 74.3 84 47.6
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 1.0e-11 74.3 176 33.0
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 2.2e-11 73.2 139 38.1
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 1.4e-10 70.5 151 35.8
Sp1g28300 Schrenkiella parvula HOM05D012772 ORTHO05D009793 2.5e-10 69.7 165 36.4
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 5.5e-10 68.6 187 28.9
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 1.6e-09 67.0 160 35.0
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 2.7e-09 66.2 153 38.6
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 3.5e-09 65.9 165 35.8
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 6.1e-09 65.1 157 35.7
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 6.7e-08 61.6 198 24.7
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 5.7e-07 58.5 92 37.0
Nitab4.5_0002539g0010 Nicotiana tabacum HOM05D023668 ORTHO05D009793 1.3e-06 57.4 92 34.8
Nitab4.5_0000804g0140 Nicotiana tabacum HOM05D023668 ORTHO05D009793 6.3e-06 55.1 92 33.7


User provided reference genes

Program Settings