Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g127880 Pisum sativum HOM05D002953 ORTHO05D003249 3.4e-139 498.4 272 100.0
Medtr5g043690 Medicago truncatula HOM05D002953 ORTHO05D003249 3.4e-78 295.8 267 67.8
TPR.G24432 Trifolium pratense HOM05D002953 ORTHO05D003249 4.2e-73 278.9 247 68.4
VMungo1215G1853 Vigna mungo HOM05D002953 ORTHO05D003249 1.1e-52 211.1 246 54.9
Phvul.002G068600 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 1.1e-49 201.1 248 53.2
Lalb_Chr17g0341061 Lupinus albus HOM05D002953 ORTHO05D003249 1.9e-49 200.3 274 50.7
Glyma.02G114300 Glycine max HOM05D002953 ORTHO05D003249 4.9e-45 185.7 225 54.7
Lj4g0014446 Lotus japonicus HOM05D002953 ORTHO05D003249 1.2e-43 181.0 314 44.9
Medtr5g043685 Medicago truncatula HOM05D002953 ORTHO05D003249 1.6e-43 180.6 243 51.4
Ca_04942_v3 Cicer arietinum L. HOM05D002953 ORTHO05D003249 2.1e-43 180.3 203 59.6
Medtr4g082910 Medicago truncatula HOM05D002953 ORTHO05D003249 6.0e-43 178.7 295 47.1
Glyma.01G056000 Glycine max HOM05D002953 ORTHO05D003249 7.3e-41 171.8 246 48.4
TPR.G34076 Trifolium pratense HOM05D002953 ORTHO05D003249 2.8e-32 143.3 305 41.0
Ca_18812_v3 Cicer arietinum L. HOM05D002953 ORTHO05D003249 5.2e-31 139.0 240 45.4
Lj2g0025232 Lotus japonicus HOM05D002953 ORTHO05D003249 3.2e-28 129.8 259 43.6
Lalb_Chr16g0385611 Lupinus albus HOM05D002953 ORTHO05D003249 2.1e-27 127.1 280 41.1
CiPaw.05G127400 Carya illinoinensis HOM05D002953 ORTHO05D003249 1.3e-26 124.4 276 39.9
Actinidia19918 Actinidia chinensis HOM05D002953 ORTHO05D003249 1.1e-25 121.3 272 40.1
Dinv16709 Davidia involucrata HOM05D002953 ORTHO05D003249 3.3e-25 119.8 235 41.3
arahy.Tifrunner.gnm1.ann1.GA8N54 Arachis hypogaea HOM05D002953 ORTHO05D003249 4.3e-25 119.4 263 41.1
Phvul.002G168100 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 5.6e-25 119.0 285 38.2
Psat7g135400 Pisum sativum HOM05D002953 ORTHO05D003249 5.6e-25 119.0 246 42.3
FvH4_4g30432 Fragaria vesca HOM05D002953 ORTHO05D003249 1.6e-24 117.5 272 39.7
VMungo0251G2769 Vigna mungo HOM05D002953 ORTHO05D003249 4.0e-23 112.8 271 38.7
FAN07G2390 Fragaria x ananassa HOM05D000954 ORTHO05D000822 6.9e-23 112.1 272 39.3
TAR371G0440 Trochodendron aralioides HOM05D002953 ORTHO05D003249 7.6e-22 108.6 269 36.4
FAN22G1160 Fragaria x ananassa HOM05D000954 ORTHO05D003249 1.7e-21 107.5 258 38.8
FAN12G1055 Fragaria x ananassa HOM05D002953 ORTHO05D003249 2.9e-21 106.7 283 37.8
Nn4g23349 Nelumbo nucifera HOM05D002953 ORTHO05D003249 3.8e-21 106.3 276 37.0
QL03p071046 Quercus lobata HOM05D002953 ORTHO05D003249 3.8e-21 106.3 277 35.4
Hma1.2p1_0357F.1_g134470 Hydrangea macrophylla HOM05D002953 ORTHO05D003249 6.4e-21 105.5 240 37.5
arahy.Tifrunner.gnm1.ann1.FH6P3F Arachis hypogaea HOM05D002953 ORTHO05D003249 1.4e-20 104.4 273 38.8
CANSAT64G0943 Cannabis sativa HOM05D002953 ORTHO05D003249 5.4e-20 102.4 287 32.8
Haze_11930 Corylus avellana HOM05D002953 ORTHO05D003249 7.1e-20 102.1 262 39.3
Atru.chr11.1683 Acer truncatum HOM05D002953 ORTHO05D003249 1.0e-18 98.2 272 33.5
Potri.010G160900 Populus trichocarpa HOM05D002953 ORTHO05D003249 3.0e-18 96.7 275 35.3
Potri.008G093300 Populus trichocarpa HOM05D002953 ORTHO05D003249 1.1e-17 94.7 297 34.0
Rhsim12G0076400 Rhododendron simsii HOM05D002953 ORTHO05D003249 2.5e-17 93.6 301 34.2
Sabra10G0122400 Salix brachista HOM05D002953 ORTHO05D003249 5.6e-17 92.4 255 36.1
Peaxi162Scf00187g01311 Petunia axillaris HOM05D002953 ORTHO05D003249 2.1e-16 90.5 262 35.9
CSS0004001 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 2.8e-16 90.1 253 33.2
Glyma.20G027100 Glycine max HOM05D002953 ORTHO05D003249 2.8e-16 90.1 226 37.6
Prupe.1G282700 Prunus persica HOM05D002953 ORTHO05D003249 6.2e-16 89.0 264 34.5
TAR622G0728 Trochodendron aralioides HOM05D002953 ORTHO05D003249 6.2e-16 89.0 253 33.2
TWI75G0656 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 8.1e-16 88.6 242 36.4
Nn3g17381 Nelumbo nucifera HOM05D002953 ORTHO05D003249 1.1e-15 88.2 285 33.3
Ciclev10033969m.g Citrus clementina HOM05D002953 ORTHO05D003249 3.1e-15 86.7 314 30.6
Nitab4.5_0000014g0320 Nicotiana tabacum HOM05D002953 ORTHO05D003249 4.0e-15 86.3 277 32.9
RcHm_v2.0_Chr4g0438751 Rosa chinensis HOM05D002953 ORTHO05D003249 7.6e-14 82.0 273 33.0
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 9.9e-14 81.6 293 32.1
PGR102G2110 Punica granatum HOM05D002953 ORTHO05D003249 1.9e-12 77.4 293 32.1
CiPaw.06G090600 Carya illinoinensis HOM05D002953 ORTHO05D003249 4.2e-12 76.3 217 36.4
Oeu016226.1 Olea europaea HOM05D002953 ORTHO05D003249 4.2e-12 76.3 290 29.7
HPP92_013438 Vanilla planifolia HOM05D002953 ORTHO05D003249 5.5e-12 75.9 267 29.6
CARHR014290 Cardamine hirsuta HOM05D002953 ORTHO05D003249 7.1e-12 75.5 290 31.4
Glyma.07G226700 Glycine max HOM05D002953 ORTHO05D003249 7.1e-12 75.5 232 34.9
THA.LOC104807117 Tarenaya hassleriana HOM05D002953 ORTHO05D003249 9.3e-12 75.1 303 30.4
Aqoxy3G00465 Aquilegia oxysepala HOM05D002953 ORTHO05D003249 1.2e-11 74.7 244 32.8
Lsat_1_v5_gn_4_12001 Lactuca sativa HOM05D002953 ORTHO05D003249 3.5e-11 73.2 227 32.2
Cc11_g12310 Coffea canephora HOM05D002953 ORTHO05D003249 1.0e-10 71.6 263 30.8
MD13G1065400 Malus domestica HOM05D002953 ORTHO05D003249 6.7e-10 68.9 197 33.5
Sabra08G0070100 Salix brachista HOM05D002953 ORTHO05D003249 6.7e-10 68.9 235 33.6
BcaB03g13124 Brassica carinata HOM05D002953 ORTHO05D003249 8.7e-10 68.6 287 29.6
AL1G25750 Arabidopsis lyrata HOM05D002953 ORTHO05D003249 1.1e-09 68.2 272 32.7
C05p11700 Brassica napus HOM05D002953 ORTHO05D003249 1.1e-09 68.2 262 32.4
Thhalv10009533m.g Eutrema salsugineum HOM05D002953 ORTHO05D003249 1.1e-09 68.2 297 32.0
Solyc05g012550.4 Solanum lycopersicum HOM05D002953 ORTHO05D003249 1.1e-09 68.2 170 37.1
CDE10G0450 Ceratophyllum demersum HOM05D002953 ORTHO05D003249 1.9e-09 67.4 259 32.0
HanXRQChr12g0375351 Helianthus annuus HOM05D002953 ORTHO05D003249 2.5e-09 67.0 253 30.0
PSO478G1910 Papaver somniferum HOM05D002953 ORTHO05D003249 2.5e-09 67.0 293 29.0
BcaC05g25290 Brassica carinata HOM05D002953 ORTHO05D003249 3.3e-09 66.6 259 32.0
SalBow2G2783 Salvia bowleyana HOM05D002953 ORTHO05D003249 3.3e-09 66.6 258 31.4
BolC5t29917H Brassica oleracea HOM05D002953 ORTHO05D003249 4.3e-09 66.2 262 32.1
SalBow2G1905 Salvia bowleyana HOM05D002953 ORTHO05D003249 4.3e-09 66.2 258 31.4
Sp1g12040 Schrenkiella parvula HOM05D002953 ORTHO05D003249 4.3e-09 66.2 296 30.7
BraA08t35143Z Brassica rapa HOM05D002953 ORTHO05D003249 1.3e-08 64.7 297 29.0
Migut.L01214 Erythranthe guttata HOM05D002953 ORTHO05D003249 1.3e-08 64.7 251 30.7
A08p32200 Brassica napus HOM05D002953 ORTHO05D003249 1.6e-08 64.3 297 29.0
BolC8t49262H Brassica oleracea HOM05D002953 ORTHO05D003249 2.1e-08 63.9 299 28.8
MD16G1063900 Malus domestica HOM05D002953 ORTHO05D003249 2.8e-08 63.5 222 32.0
C08p16380 Brassica napus HOM05D002953 ORTHO05D003249 3.7e-08 63.2 296 30.1
Carub.0001s1362 Capsella rubella HOM05D002953 ORTHO05D003249 3.7e-08 63.2 282 29.1
ClCG04G011980 Citrullus lanatus HOM05D002953 ORTHO05D003249 4.8e-08 62.8 225 32.4
Cpa.g.sc1.99 Carica papaya HOM05D002953 ORTHO05D003249 8.1e-08 62.0 215 34.0
Sed0002075 Sechium edule HOM05D002953 ORTHO05D003249 8.1e-08 62.0 279 29.7
BraA06t24181Z Brassica rapa HOM05D002953 ORTHO05D003249 2.4e-07 60.5 256 32.0
Sopen04g001490 Solanum pennellii HOM05D002953 ORTHO05D003249 2.4e-07 60.5 236 30.5
BcaC07g38708 Brassica carinata HOM05D002953 ORTHO05D003249 3.1e-07 60.1 296 29.7
CsaV3_1G005800 Cucumis sativus L. HOM05D002953 ORTHO05D003249 4.0e-07 59.7 253 30.0
GSVIVG01012183001 Vitis vinifera HOM05D002953 ORTHO05D003249 4.0e-07 59.7 275 29.1
DCAR_026019 Daucus carota HOM05D002953 ORTHO05D003249 6.9e-07 58.9 239 26.4
Sopen05g007380 Solanum pennellii HOM05D002953 ORTHO05D003249 6.9e-07 58.9 328 28.0
PSO017G2547 Papaver somniferum HOM05D002953 ORTHO05D003249 9.0e-07 58.5 285 28.4
Manes.14G083400 Manihot esculenta HOM05D002953 ORTHO05D003249 1.5e-06 57.8 221 29.4
CAN.G1340.5 Capsicum annuum HOM05D002953 ORTHO05D003249 2.6e-06 57.0 170 32.9
vmacro01327 Vaccinium macrocarpon HOM05D002953 ORTHO05D003249 2.6e-06 57.0 103 39.8
ClCG05G023850 Citrullus lanatus HOM05D002953 ORTHO05D003249 4.5e-06 56.2 256 31.2
Sed0013431 Sechium edule HOM05D002953 ORTHO05D003249 5.8e-06 55.8 254 30.7
QL10p018596 Quercus lobata HOM05D002953 ORTHO05D003249 1.0e-05 55.1 253 28.1


User provided reference genes

Program Settings