Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.6e-77 292.7 152 100.0
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 3.0e-60 235.3 130 93.1
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 3.7e-58 228.4 130 89.2
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 4.1e-57 224.9 130 86.9
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 5.3e-57 224.6 130 86.9
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 1.5e-56 223.0 130 87.7
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 2.6e-56 222.2 130 84.6
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.3e-55 219.9 129 86.0
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 1.7e-55 219.5 130 84.6
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 7.2e-54 214.2 130 83.1
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 3.6e-53 211.8 130 80.0
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 6.1e-53 211.1 130 79.2
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.0e-52 210.3 130 78.5
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 1.8e-52 209.5 130 80.0
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 1.8e-52 209.5 138 76.8
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 2.3e-52 209.1 130 81.5
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 3.9e-52 208.4 130 79.2
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 5.1e-52 208.0 130 78.5
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 5.1e-52 208.0 130 81.5
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.1e-51 206.8 130 77.7
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.1e-51 206.8 130 80.0
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 1.5e-51 206.5 130 79.2
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 2.6e-51 205.7 125 78.4
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 3.3e-51 205.3 130 76.2
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 3.3e-51 205.3 130 76.9
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 9.7e-51 203.8 130 76.9
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 9.7e-51 203.8 129 76.0
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.3e-50 203.4 130 79.2
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 1.3e-50 203.4 110 93.6
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.3e-50 203.4 130 76.2
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.7e-50 203.0 130 75.4
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 2.2e-50 202.6 130 77.7
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 2.2e-50 202.6 130 79.2
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 2.8e-50 202.2 130 78.5
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 2.8e-50 202.2 130 72.3
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 2.8e-50 202.2 130 74.6
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 3.7e-50 201.8 130 76.9
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 3.7e-50 201.8 130 75.4
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 3.7e-50 201.8 130 78.5
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 4.8e-50 201.4 130 76.9
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 6.3e-50 201.1 137 75.9
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 8.2e-50 200.7 130 73.1
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 1.1e-49 200.3 130 74.6
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.8e-49 199.5 129 74.4
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 2.4e-49 199.1 130 74.6
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 3.1e-49 198.7 129 74.4
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 3.1e-49 198.7 130 74.6
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 6.9e-49 197.6 130 76.2
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.2e-48 196.8 127 75.6
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.0e-48 196.1 130 74.6
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 2.6e-48 195.7 140 70.0
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 3.4e-48 195.3 130 73.1
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 5.9e-48 194.5 132 73.5
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 7.7e-48 194.1 130 73.1
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 1.0e-47 193.7 130 73.8
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.3e-47 193.4 129 74.4
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 1.3e-47 193.4 130 73.8
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 1.3e-47 193.4 129 72.9
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.7e-47 193.0 130 73.8
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 5.0e-47 191.4 130 73.1
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 8.5e-47 190.7 125 74.4
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 1.1e-46 190.3 130 70.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 1.1e-46 190.3 130 70.8
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 3.2e-46 188.7 125 74.4
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 2.7e-45 185.7 142 66.2
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.4e-44 183.3 130 66.9
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.4e-44 183.3 130 66.9
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.4e-44 183.3 130 66.9
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 8.8e-44 180.6 123 70.7
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 7.4e-43 177.6 139 65.5
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 7.4e-43 177.6 130 68.5
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 2.2e-42 176.0 130 67.7
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 2.2e-42 176.0 111 74.8
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 2.8e-42 175.6 130 70.8
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 7.0e-41 171.0 130 65.4
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 9.1e-41 170.6 130 66.9
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 9.1e-41 170.6 135 63.7
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 5.9e-40 167.9 109 70.6
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 7.7e-40 167.5 177 53.7
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 2.9e-39 165.6 125 67.2
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.5e-38 163.3 156 54.5
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 2.5e-38 162.5 130 61.5
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 4.2e-38 161.8 125 67.2
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 7.2e-38 161.0 138 60.1
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 1.6e-37 159.8 124 62.1
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 6.1e-37 157.9 129 62.0
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 6.1e-37 157.9 129 62.0
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 6.1e-37 157.9 129 59.7
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.0e-36 157.1 130 60.0
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.0e-36 157.1 129 61.2
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 1.0e-36 157.1 129 60.5
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.4e-36 156.8 129 61.2
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 3.0e-36 155.6 129 60.5
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 4.0e-36 155.2 124 61.3
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 6.7e-36 154.5 129 60.5
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 8.8e-36 154.1 89 85.4
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 1.2e-35 153.7 129 58.9
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.5e-35 153.3 129 60.5
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.5e-35 153.3 129 60.5
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 2.6e-35 152.5 129 58.1
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 5.7e-35 151.4 123 60.2
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 3.1e-33 145.6 127 56.7
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 3.1e-33 145.6 116 61.2
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 4.1e-33 145.2 123 57.7
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 2.0e-32 142.9 129 57.4
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.5e-32 142.1 110 66.4
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 6.5e-31 137.9 124 51.6
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.9e-30 136.3 116 59.5
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 2.7e-29 132.5 141 47.5
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 7.5e-27 124.4 65 89.2
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 3.5e-24 115.5 87 60.9
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 3.8e-23 112.1 127 52.8
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 4.7e-21 105.1 130 46.2
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 5.9e-16 88.2 55 76.4
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 3.8e-15 85.5 70 58.6
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 4.3e-14 82.0 61 63.9
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 1.2e-11 73.9 56 64.3
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 1.7e-10 70.1 112 41.1
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 4.3e-06 55.5 34 76.5
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 4.3e-06 55.5 34 76.5


User provided reference genes

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