Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g119080 Pisum sativum HOM05D000082 ORTHO05D000038 3.6e-74 281.6 148 100.0
Psat2g119120 Pisum sativum HOM05D000082 ORTHO05D000038 1.8e-65 252.7 134 98.5
Psat2g119160 Pisum sativum HOM05D000082 ORTHO05D000038 1.8e-65 252.7 134 98.5
Psat2g118960 Pisum sativum HOM05D000082 ORTHO05D000038 2.3e-28 129.4 121 63.6
Medtr5g041310 Medicago truncatula HOM05D000082 ORTHO05D000038 8.9e-25 117.5 110 60.0
Lalb_Chr04g0255991 Lupinus albus HOM05D000082 ORTHO05D000038 5.4e-22 108.2 110 54.5
Lj2g0016541 Lotus japonicus HOM05D000082 ORTHO05D000038 7.0e-22 107.8 110 53.6
TPR.G7140 Trifolium pratense HOM05D000082 ORTHO05D000038 1.5e-19 100.1 111 56.8
Gorai.013G086200 Gossypium raimondii HOM05D000082 ORTHO05D000038 8.1e-18 94.4 128 45.3
Ca_04814_v3 Cicer arietinum L. HOM05D000082 ORTHO05D000038 1.4e-17 93.6 112 54.5
Duzib248G1345 Durio zibethinus HOM05D000082 ORTHO05D000038 1.4e-17 93.6 126 45.2
Gohir.D13G075500 Gossypium hirsutum HOM05D000082 ORTHO05D000038 5.2e-17 91.7 127 45.7
Lalb_Chr10g0098341 Lupinus albus HOM05D000082 ORTHO05D000038 5.2e-17 91.7 113 46.0
Glyma.02G108300 Glycine max HOM05D000082 ORTHO05D000038 2.0e-16 89.7 111 48.6
Thecc.02G344800 Theobroma cacao HOM05D000082 ORTHO05D000038 2.6e-16 89.4 125 44.0
COL.COLO4_22956 Corchorus olitorius HOM05D000082 ORTHO05D000038 1.7e-15 86.7 134 40.3
Manes.01G036200 Manihot esculenta HOM05D000082 ORTHO05D000038 1.7e-15 86.7 133 41.4
VMungo1215G1376 Vigna mungo HOM05D000082 ORTHO05D000038 1.7e-15 86.7 120 45.0
Haze_12003 Corylus avellana HOM05D000082 ORTHO05D000038 6.4e-15 84.7 113 45.1
Sabra08G0065000 Salix brachista HOM05D000082 ORTHO05D000038 1.4e-14 83.6 111 47.7
TAR622G0053 Trochodendron aralioides HOM05D000082 ORTHO05D000038 1.4e-14 83.6 114 48.2
Potri.010G168300 Populus trichocarpa HOM05D000082 ORTHO05D000038 2.4e-14 82.8 111 46.8
Sabra10G0128100 Salix brachista HOM05D000082 ORTHO05D000038 5.4e-14 81.6 111 47.7
Atru.chr11.1776 Acer truncatum HOM05D000082 ORTHO05D000038 9.2e-14 80.9 114 43.9
Phvul.002G084300 Phaseolus vulgaris HOM05D000082 ORTHO05D000038 9.2e-14 80.9 110 48.2
Cpa.g.sc128.37 Carica papaya HOM05D000082 ORTHO05D000038 1.6e-13 80.1 120 45.0
Glyma.01G048700 Glycine max HOM05D000082 ORTHO05D000038 1.6e-13 80.1 111 47.7
CiPaw.05G134100 Carya illinoinensis HOM05D000082 ORTHO05D000038 3.5e-13 79.0 110 43.6
CANSAT64G0227 Cannabis sativa HOM05D000082 ORTHO05D000038 1.0e-12 77.4 113 43.4
Ciclev10032639m.g Citrus clementina HOM05D000082 ORTHO05D000038 1.3e-12 77.0 114 40.4
Nn4g23189 Nelumbo nucifera HOM05D000082 ORTHO05D000038 2.3e-12 76.3 111 47.7
GSVIVG01019972001 Vitis vinifera HOM05D000082 ORTHO05D000038 3.0e-12 75.9 116 44.0
Cfa008971 Carpinus fangiana HOM05D000082 ORTHO05D000038 8.6e-12 74.3 105 41.9
Medtr5g041330 Medicago truncatula HOM05D000082 ORTHO05D000038 7.3e-11 71.2 110 44.5
Duzib268G0080 Durio zibethinus HOM05D000082 ORTHO05D000038 9.5e-11 70.9 135 39.3
QL03p068727 Quercus lobata HOM05D000082 ORTHO05D000038 1.6e-10 70.1 120 38.3
Sabra06G0061700 Salix brachista HOM05D000470 ORTHO05D000348 1.6e-10 70.1 95 45.3
Manes.05G102000 Manihot esculenta HOM05D000082 ORTHO05D000038 2.8e-10 69.3 113 38.9
Potri.008G087200 Populus trichocarpa HOM05D000082 ORTHO05D000038 2.8e-10 69.3 98 41.8
Oeu014035.1 Olea europaea HOM05D000082 ORTHO05D000038 4.7e-10 68.6 120 41.7
Duzib251G0205 Durio zibethinus HOM05D000082 ORTHO05D000038 6.2e-10 68.2 131 38.9
TAR374G0841 Trochodendron aralioides HOM05D000082 ORTHO05D000038 1.1e-09 67.4 96 47.9
CARHR025130 Cardamine hirsuta HOM05D000082 ORTHO05D000038 1.4e-09 67.0 117 41.0
Thhalv10009887m.g Eutrema salsugineum HOM05D000082 ORTHO05D000038 1.4e-09 67.0 115 41.7
Manes.12G105400 Manihot esculenta HOM05D000082 ORTHO05D000038 1.4e-09 67.0 113 38.1
Manes.12G105500 Manihot esculenta HOM05D000082 ORTHO05D000038 1.4e-09 67.0 113 38.1
Manes.14G113900 Manihot esculenta HOM05D000082 ORTHO05D000038 1.8e-09 66.6 113 37.2
Actinidia33202 Actinidia chinensis HOM05D000082 ORTHO05D000038 2.4e-09 66.2 119 45.4
Actinidia12286 Actinidia chinensis HOM05D000082 ORTHO05D000038 3.1e-09 65.9 119 45.4
Manes.14G114000 Manihot esculenta HOM05D000082 ORTHO05D000038 6.8e-09 64.7 113 37.2
Prupe.1G275700 Prunus persica HOM05D000082 ORTHO05D000038 8.9e-09 64.3 116 37.1
TAR629G2341 Trochodendron aralioides HOM05D000082 ORTHO05D000038 1.2e-08 63.9 112 43.8
Sp1g21990 Schrenkiella parvula HOM05D000082 ORTHO05D000038 1.5e-08 63.5 116 39.7
AT1G26800 Arabidopsis thaliana HOM05D000082 ORTHO05D000038 2.0e-08 63.2 117 39.3
Dinv16655 Davidia involucrata HOM05D000082 ORTHO05D000038 2.0e-08 63.2 119 43.7
Sed0026117 Sechium edule HOM05D000082 ORTHO05D000038 2.0e-08 63.2 115 36.5
BcaB03g14090 Brassica carinata HOM05D000082 ORTHO05D000038 1.3e-07 60.5 116 37.1
AL1G38880 Arabidopsis lyrata HOM05D000082 ORTHO05D000038 1.7e-07 60.1 117 37.6
Carub.0001s2417 Capsella rubella HOM05D000082 ORTHO05D000038 2.9e-07 59.3 113 38.1
Hma1.2p1_0795F.1_g218930 Hydrangea macrophylla HOM05D000082 ORTHO05D000038 2.9e-07 59.3 119 42.9
TWI79G0903 Tripterygium wilfordii HOM05D000082 ORTHO05D000038 3.8e-07 58.9 114 36.8
Cc00_g30280 Coffea canephora HOM05D000082 ORTHO05D000038 4.9e-07 58.5 127 39.4
Cc11_g12900 Coffea canephora HOM05D000082 ORTHO05D000038 4.9e-07 58.5 127 39.4
Sabra07G0096400 Salix brachista HOM05D000082 ORTHO05D000038 4.9e-07 58.5 67 50.7
BcaC06g35120 Brassica carinata HOM05D000082 ORTHO05D000038 2.4e-06 56.2 113 37.2
C07p19610 Brassica napus HOM05D000082 ORTHO05D000038 2.4e-06 56.2 113 37.2
BolC7t42478H Brassica oleracea HOM05D000082 ORTHO05D000038 2.4e-06 56.2 113 37.2
BraA07t29083Z Brassica rapa HOM05D000082 ORTHO05D000038 4.2e-06 55.5 112 35.7
MD16G1071900 Malus domestica HOM05D000082 ORTHO05D000038 5.4e-06 55.1 111 35.1
BcaB03g12009 Brassica carinata HOM05D000082 ORTHO05D000038 7.1e-06 54.7 113 34.5
PGSC0003DMG400018407 Solanum tuberosum HOM05D000082 ORTHO05D000038 7.1e-06 54.7 114 39.5
A07p13120 Brassica napus HOM05D000082 ORTHO05D000038 9.2e-06 54.3 112 34.8
A08p27550 Brassica napus HOM05D000082 ORTHO05D000038 9.2e-06 54.3 111 36.0
BraA08t34694Z Brassica rapa HOM05D000082 ORTHO05D000038 9.2e-06 54.3 101 35.6


User provided reference genes

Program Settings