Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 7.9e-264 913.3 486 100.0
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.2e-237 825.5 487 87.9
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 6.3e-237 823.9 489 91.0
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 6.6e-210 734.2 494 78.3
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 5.1e-194 681.4 499 70.5
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.8e-191 672.9 495 70.5
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 2.2e-189 666.0 499 72.3
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.3e-186 656.0 493 71.2
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 6.9e-183 644.4 490 65.1
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 6.7e-178 627.9 504 65.3
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 2.6e-158 562.8 473 62.2
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.7e-157 560.1 370 67.6
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 4.2e-156 555.4 463 58.1
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 5.5e-156 555.1 466 59.7
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 9.3e-156 554.3 472 57.6
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 9.3e-156 554.3 493 56.6
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 9.3e-156 554.3 498 58.6
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.6e-155 553.5 378 66.7
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.5e-153 547.0 498 58.6
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.5e-153 547.0 377 66.6
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.9e-153 546.6 379 65.7
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 3.3e-153 545.8 487 56.1
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 4.3e-153 545.4 377 67.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 5.7e-153 545.0 501 57.9
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 2.2e-152 543.1 438 59.1
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.9e-151 538.1 378 66.7
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 9.1e-151 537.7 466 57.5
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.0e-150 536.6 378 66.1
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.4e-150 535.8 380 64.7
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.7e-149 533.5 462 57.6
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.8e-149 532.3 495 54.3
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 1.1e-148 530.8 476 55.7
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.5e-148 529.6 484 56.2
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 5.5e-148 528.5 377 64.5
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 5.5e-148 528.5 377 64.5
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 7.2e-148 528.1 481 55.1
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 2.1e-147 526.6 372 64.2
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 2.7e-147 526.2 369 64.5
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 6.1e-147 525.0 380 63.7
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 7.9e-147 524.6 371 64.2
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 1.8e-146 523.5 373 64.3
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 5.7e-145 518.5 369 64.2
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 5.7e-145 518.5 488 54.5
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.4e-145 518.1 486 53.5
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 3.7e-144 515.8 371 63.9
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 8.2e-144 514.6 376 63.3
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.6e-142 509.6 483 53.2
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.4e-142 509.2 485 52.6
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 5.9e-142 508.4 363 64.2
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 5.9e-142 508.4 376 62.2
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 8.5e-141 504.6 380 62.6
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 2.5e-140 503.1 379 62.0
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.5e-140 503.1 376 61.4
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 5.5e-140 501.9 377 62.3
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 9.4e-140 501.1 373 62.5
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 9.4e-140 501.1 498 52.2
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.2e-139 500.7 372 63.2
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 3.6e-139 499.2 381 61.4
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 8.8e-138 494.6 379 61.5
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.1e-137 494.2 370 61.6
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.5e-137 493.8 387 60.2
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.6e-137 493.0 380 61.8
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 7.4e-137 491.5 486 52.9
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 7.4e-137 491.5 486 52.9
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 8.2e-136 488.0 374 59.9
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.4e-135 486.5 460 55.4
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 3.1e-135 486.1 377 59.7
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.1e-135 486.1 381 59.3
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 9.1e-135 484.6 373 62.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 2.0e-134 483.4 378 59.5
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 3.5e-134 482.6 373 62.2
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 4.5e-134 482.3 479 51.8
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 5.9e-134 481.9 377 61.3
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.7e-134 481.5 486 51.2
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-133 481.1 486 51.6
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 3.8e-133 479.2 486 51.0
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.1e-132 477.6 370 60.0
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.9e-132 476.9 369 59.6
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.2e-132 475.7 486 50.8
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 5.5e-132 475.3 375 61.1
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 7.2e-132 474.9 372 59.7
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 7.2e-132 474.9 372 59.7
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 7.2e-132 474.9 372 59.7
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.2e-131 474.2 385 60.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.6e-131 473.8 373 59.0
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 2.1e-131 473.4 489 50.3
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 4.7e-131 472.2 374 59.9
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 8.0e-131 471.5 374 61.2
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.0e-130 471.1 381 60.1
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.3e-130 469.9 372 60.2
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 3.0e-130 469.5 377 60.5
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 6.7e-130 468.4 377 60.5
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.8e-127 460.3 361 60.1
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 5.3e-127 458.8 380 59.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.5e-124 450.7 374 55.6
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 5.5e-124 448.7 360 58.9
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.4e-119 432.2 371 52.8
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.4e-113 412.9 375 53.1
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.0e-102 377.1 374 48.7
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 5.8e-89 332.4 325 51.7
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.8e-89 332.4 479 41.1
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 7.1e-79 298.9 358 44.4
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 1.7e-77 294.3 211 66.4
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.4e-74 284.6 353 44.2
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.0e-74 283.1 255 52.5
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.9e-72 276.9 207 62.8
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.9e-68 264.2 396 39.4
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.4e-66 257.3 494 34.8
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 4.2e-55 219.9 309 39.5
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 4.6e-54 216.5 389 36.0
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 3.3e-36 157.1 112 64.3
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.6e-30 137.1 375 30.9
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 8.8e-29 132.5 112 56.2
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 1.5e-28 131.7 136 48.5
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 2.2e-27 127.9 329 33.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.7e-27 127.1 129 49.6
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.1e-26 125.6 392 30.4
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.5e-25 121.7 372 28.8
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 7.7e-25 119.4 378 27.2
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 4.4e-20 103.6 53 81.1
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.7e-20 102.4 226 35.0
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.5e-07 62.0 41 65.9


User provided reference genes

Program Settings