Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 1.6e-115 419.5 210 100.0
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 9.4e-113 410.2 209 98.1
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 6.2e-80 301.2 214 71.0
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 1.9e-73 279.6 192 75.0
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 6.2e-72 274.6 217 70.0
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 3.8e-61 238.8 227 59.0
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.4e-55 220.3 224 52.7
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 4.0e-55 218.8 229 55.0
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 2.6e-54 216.1 220 52.3
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 3.4e-54 215.7 229 54.6
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 2.2e-53 213.0 231 52.8
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 2.9e-53 212.6 216 51.4
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 4.9e-53 211.8 227 52.0
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 4.2e-52 208.8 231 51.5
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 4.6e-51 205.3 220 52.7
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 1.7e-50 203.4 231 49.4
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.7e-50 203.4 166 63.3
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 5.1e-50 201.8 188 56.9
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 8.7e-50 201.1 227 49.3
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 1.5e-49 200.3 217 51.6
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 1.9e-49 199.9 223 49.8
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 2.5e-49 199.5 229 48.9
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 7.3e-49 198.0 188 56.9
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 9.6e-49 197.6 220 51.8
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.6e-48 196.8 165 58.8
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 2.8e-48 196.1 233 47.6
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 3.6e-48 195.7 153 60.8
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 4.8e-48 195.3 234 48.3
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 1.4e-47 193.7 154 59.1
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 4.0e-47 192.2 185 54.6
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 4.0e-47 192.2 240 47.9
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 5.3e-47 191.8 153 60.8
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 6.9e-47 191.4 186 54.3
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 9.0e-47 191.0 232 49.6
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 9.0e-47 191.0 232 48.3
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 9.0e-47 191.0 235 46.4
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.2e-46 190.7 233 45.1
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.0e-46 189.9 234 47.0
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.0e-46 189.9 241 46.5
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 2.0e-46 189.9 227 47.1
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 3.4e-46 189.1 236 48.7
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 3.4e-46 189.1 167 55.7
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 4.5e-46 188.7 212 52.4
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 7.6e-46 188.0 164 55.5
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 7.6e-46 188.0 218 48.2
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 7.6e-46 188.0 221 50.2
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.3e-45 187.2 232 47.0
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 1.3e-45 187.2 167 55.7
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 2.2e-45 186.4 159 58.5
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 2.2e-45 186.4 159 58.5
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 2.2e-45 186.4 228 49.6
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 2.9e-45 186.0 221 48.9
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 3.8e-45 185.7 229 46.7
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 3.8e-45 185.7 229 48.9
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 3.8e-45 185.7 266 42.9
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 8.4e-45 184.5 154 58.4
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 1.1e-44 184.1 244 46.7
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.1e-44 184.1 244 46.7
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.1e-44 184.1 234 46.6
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 1.1e-44 184.1 217 48.8
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 3.2e-44 182.6 218 50.5
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 3.2e-44 182.6 141 60.3
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 3.2e-44 182.6 190 51.6
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 7.1e-44 181.4 222 51.4
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 7.1e-44 181.4 222 49.1
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 7.1e-44 181.4 222 49.1
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 7.1e-44 181.4 227 48.9
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 9.3e-44 181.0 236 47.9
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.3e-44 181.0 151 57.6
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 2.1e-43 179.9 176 53.4
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 7.9e-43 177.9 222 49.1
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.3e-42 177.2 222 49.5
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 1.3e-42 177.2 225 46.2
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 2.3e-42 176.4 217 46.1
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 3.0e-42 176.0 153 54.9
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.9e-42 175.6 221 51.1
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 3.9e-42 175.6 206 46.6
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 5.1e-42 175.3 224 48.7
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 5.1e-42 175.3 193 50.8
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 6.7e-42 174.9 255 45.1
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 1.9e-41 173.3 212 50.5
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.9e-41 173.3 219 50.2
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.9e-41 173.3 221 50.7
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 3.3e-41 172.6 146 58.2
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 3.3e-41 172.6 153 57.5
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 3.3e-41 172.6 218 46.3
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 4.3e-41 172.2 229 46.3
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 1.6e-40 170.2 272 40.8
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 2.8e-40 169.5 146 54.8
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 3.7e-40 169.1 206 47.6
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 6.2e-40 168.3 145 54.5
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 6.2e-40 168.3 223 47.1
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 8.1e-40 167.9 230 45.2
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 4.0e-39 165.6 114 71.9
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 5.3e-39 165.2 143 59.4
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 6.9e-39 164.9 153 52.3
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 9.0e-39 164.5 229 45.0
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 2.0e-38 163.3 173 50.9
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 2.0e-38 163.3 231 42.0
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 4.5e-38 162.2 278 39.9
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 6.5e-37 158.3 205 42.4
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 8.4e-37 157.9 214 42.1
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 2.3e-34 149.8 220 42.7
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 2.1e-32 143.3 206 45.1
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 9.0e-31 137.9 218 39.9
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 1.1e-28 131.0 111 55.9
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 6.1e-27 125.2 112 56.2
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 6.1e-27 125.2 98 62.2
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 1.0e-21 107.8 139 37.4
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.8e-21 105.9 141 36.2
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 6.5e-21 105.1 160 38.8
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 8.5e-21 104.8 89 58.4
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.6e-19 99.4 147 41.5
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 3.6e-19 99.4 147 41.5
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 4.6e-19 99.0 163 38.7
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 2.3e-18 96.7 64 71.9
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 3.0e-18 96.3 64 68.8
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 6.9e-15 85.1 145 37.2
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 3.2e-12 76.3 164 34.8
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 6.1e-11 72.0 61 59.0
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.4e-10 70.9 129 32.6


User provided reference genes

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