Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g103080 Pisum sativum HOM05D000003 ORTHO05D000004 1.3e-238 829.3 406 100.0
Psat7g059240 Pisum sativum HOM05D000003 ORTHO05D000022 2.5e-37 160.6 241 37.8
Psat4g029800 Pisum sativum HOM05D000003 ORTHO05D000004 1.1e-32 145.2 434 27.2
Psat4g044960 Pisum sativum HOM05D000003 ORTHO05D012377 2.1e-28 131.0 218 38.5
Psat5g143280 Pisum sativum HOM05D000003 ORTHO05D011085 9.0e-27 125.6 367 29.2
Psat5g160440 Pisum sativum HOM05D000003 ORTHO05D000004 8.7e-22 109.0 93 49.5
Psat2g155520 Pisum sativum HOM05D000003 ORTHO05D000004 1.5e-18 98.2 81 54.3
Psat0s3594g0080 Pisum sativum HOM05D000003 ORTHO05D000004 2.6e-18 97.4 211 29.9
Psat6g066320 Pisum sativum HOM05D000003 ORTHO05D011085 6.4e-17 92.8 374 26.2
Psat1g083000 Pisum sativum HOM05D000003 ORTHO05D015733 3.5e-15 87.0 242 28.9
Psat5g176960 Pisum sativum HOM05D000003 ORTHO05D000004 1.8e-14 84.7 90 42.2
Psat4g006520 Pisum sativum HOM05D000003 ORTHO05D000006 2.3e-14 84.3 81 49.4
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 3.0e-14 84.0 243 25.9
FvH4_1g24182 Fragaria vesca HOM05D000003 ORTHO05D000004 3.9e-14 83.6 227 25.6
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 8.7e-14 82.4 382 24.3
FvH4_3g33091 Fragaria vesca HOM05D000003 ORTHO05D000022 1.9e-13 81.3 241 29.0
CSS0039165 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-13 80.9 359 24.0
CANSAT80G0097 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-13 80.1 263 24.3
CSS0047834 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.6e-13 79.7 397 23.9
CANSAT80G1695 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-13 79.7 260 23.5
Psat7g047000 Pisum sativum HOM05D000003 ORTHO05D000022 7.4e-13 79.3 245 24.1
CANSAT01G1657 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-12 78.6 240 25.0
CSS0016144 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.7e-12 77.0 370 24.3
CANSAT54G1748 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-12 76.6 115 33.9
Atru.chr13.1905 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-12 76.3 206 25.7
Lj1g0018212 Lotus japonicus HOM05D000003 ORTHO05D000022 1.8e-11 74.7 229 26.6
SGA_v2.0_scaffold255G45374 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-11 74.3 199 28.6
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-11 73.2 221 24.9
TPR.G35390 Trifolium pratense HOM05D000003 ORTHO05D000004 5.3e-11 73.2 81 39.5
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-11 72.4 217 29.5
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 1.2e-10 72.0 268 27.2
CANSAT80G2325 Cannabis sativa HOM05D000003 ORTHO05D000004 3.4e-10 70.5 224 24.1
CSS0014386 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.6e-10 69.3 96 34.4
CSS0006955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-09 68.9 99 33.3
CANSAT54G2086 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-09 68.2 241 27.0
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-09 67.8 115 32.2
CANSAT01G2388 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-09 67.4 308 23.1
CANSAT80G2799 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-09 67.4 97 33.0
Atru.chr12.1990 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-09 67.0 214 24.3
Psat2g039320 Pisum sativum HOM05D000024 ORTHO05D000006 3.8e-09 67.0 61 52.5
CSS0037140 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-09 66.6 96 32.3
AUR62017255 Chenopodium quinoa HOM05D000003 ORTHO05D000004 4.9e-09 66.6 238 24.4
CSS0034742 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.4e-09 65.9 86 36.0
CANSAT80G1246 Cannabis sativa HOM05D000003 ORTHO05D000004 8.4e-09 65.9 250 22.4
TPR.G22534 Trifolium pratense HOM05D000003 ORTHO05D000007 1.1e-08 65.5 102 34.3
Atru.chr13.1100 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-08 64.7 67 40.3
CSS0001115 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-08 64.3 100 32.0
Medtr8g016985 Medicago truncatula HOM05D000003 ORTHO05D000004 2.5e-08 64.3 96 32.3
Atru.chr9.519 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-08 63.9 121 28.9
CiPaw.15G051200 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.2e-08 63.5 245 24.5
RcHm_v2.0_Chr2g0144631 Rosa chinensis HOM05D000003 ORTHO05D000022 4.2e-08 63.5 106 34.0
CANSAT54G0374 Cannabis sativa HOM05D000003 ORTHO05D000004 5.5e-08 63.2 238 21.8
Psat2g156640 Pisum sativum HOM05D000093 ORTHO05D000605 7.1e-08 62.8 240 26.2
TPR.G27707 Trifolium pratense HOM05D000003 ORTHO05D000004 7.1e-08 62.8 218 25.7
CSS0049107 Camellia sinensis var. sinensis HOM05D006120 ORTHO05D007913 9.3e-08 62.4 106 33.0
PSO578G0006 Papaver somniferum HOM05D000003 ORTHO05D000004 9.3e-08 62.4 218 25.7
vmacro13820 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 9.3e-08 62.4 215 23.3
PSO832G1421 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-07 62.0 206 23.8
PSO837G0049 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-07 62.0 227 22.5
CSS0004389 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-07 61.6 86 30.2
Psat6g186160 Pisum sativum HOM05D009122 ORTHO05D012377 1.6e-07 61.6 55 43.6
RcHm_v2.0_Chr1g0382551 Rosa chinensis HOM05D000003 ORTHO05D000004 2.1e-07 61.2 97 34.0
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-07 60.8 265 20.8
CANSAT54G2929 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-07 60.8 265 23.4
Psat1g022800 Pisum sativum HOM05D000003 ORTHO05D011085 2.7e-07 60.8 125 27.2
Psat3g018800 Pisum sativum HOM05D000003 ORTHO05D000004 2.7e-07 60.8 88 37.5
CANSAT21G0556 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-07 60.5 222 24.3
Prupe.7G076800 Prunus persica HOM05D000003 ORTHO05D000167 3.5e-07 60.5 106 25.5
CSS0003105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.6e-07 60.1 63 39.7
Psat5g292000 Pisum sativum HOM05D009122 ORTHO05D012377 4.6e-07 60.1 216 24.1
TPR.G36225 Trifolium pratense HOM05D013665 ORTHO05D011148 4.6e-07 60.1 88 31.8
Manes.13G092620 Manihot esculenta HOM05D000003 ORTHO05D000004 6.0e-07 59.7 101 28.7
PSO500G0047 Papaver somniferum HOM05D000003 ORTHO05D000004 7.9e-07 59.3 298 22.8
CANSAT54G2882 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 58.9 120 32.5
THA.LOC104799794 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.0e-06 58.9 278 22.3
CANSAT11G1079 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 58.5 119 31.1
CANSAT25G0754 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 58.2 113 33.6
Manes.12G104550 Manihot esculenta HOM05D000003 ORTHO05D000004 1.8e-06 58.2 243 24.3
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-06 57.8 63 36.5
Atru.chr5.1996 Acer truncatum HOM05D000003 ORTHO05D000022 2.3e-06 57.8 188 22.9
CANSAT11G0021 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-06 57.8 126 31.0
COL.COLO4_08472 Corchorus olitorius HOM05D000003 ORTHO05D000022 2.3e-06 57.8 113 28.3
Lj4g0004660 Lotus japonicus HOM05D000003 ORTHO05D000004 2.3e-06 57.8 82 34.1
PSO801G0629 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-06 57.8 201 24.4
CANSAT21G0492 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-06 57.4 115 25.2
CANSAT64G1154 Cannabis sativa HOM05D000003 ORTHO05D000004 3.0e-06 57.4 115 35.7
AUR62030068 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.0e-06 57.4 107 29.9
QL10p051120 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-06 57.4 67 37.3
CSS0024040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-06 57.0 63 36.5
CANSAT25G2443 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-06 57.0 100 32.0
CANSAT01G0185 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 56.6 115 35.7
CANSAT11G0503 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 56.6 100 28.0
Atru.chr7.171 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-06 56.2 67 32.8
CANSAT80G2424 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-06 56.2 110 32.7
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.7e-06 56.2 216 24.5
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.7e-06 56.2 275 22.5
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 6.7e-06 56.2 144 27.8
QL01p022100 Quercus lobata HOM05D000003 ORTHO05D000004 6.7e-06 56.2 133 29.3
QL93p2025_0060 Quercus lobata HOM05D000003 ORTHO05D000004 6.7e-06 56.2 287 21.3
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 8.7e-06 55.8 83 30.1
CANSAT01G3104 Cannabis sativa HOM05D000003 ORTHO05D000004 8.7e-06 55.8 285 21.8
CANSAT64G1529 Cannabis sativa HOM05D000003 ORTHO05D000004 8.7e-06 55.8 157 26.1
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 8.7e-06 55.8 92 30.4
TWI73G0607 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.7e-06 55.8 124 30.6


User provided reference genes

Program Settings