Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 6.5e-47 190.3 89 100.0
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 1.4e-41 172.6 89 91.0
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 9.1e-41 169.9 89 92.1
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 7.7e-40 166.8 91 89.0
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 2.9e-39 164.9 89 87.6
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 1.5e-35 152.5 90 81.1
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 5.7e-35 150.6 90 83.3
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 5.7e-35 150.6 90 83.3
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 1.4e-33 146.0 91 83.5
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 1.4e-33 146.0 91 83.5
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 3.1e-33 144.8 90 81.1
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.8e-28 126.7 93 77.4
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.8e-25 119.0 91 76.9
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.8e-25 119.0 91 76.9
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 5.3e-25 117.5 93 69.9
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 5.3e-25 117.5 93 69.9
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.0e-24 115.5 93 74.2
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 2.0e-24 115.5 91 69.2
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 4.5e-24 114.4 88 65.9
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 1.0e-23 113.2 86 68.6
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 6.5e-23 110.5 95 68.4
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 6.5e-23 110.5 93 68.8
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 8.5e-23 110.2 86 66.3
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 3.2e-22 108.2 92 67.4
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 3.2e-22 108.2 92 67.4
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 9.4e-22 106.7 92 67.4
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 1.6e-21 105.9 87 67.8
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 1.6e-21 105.9 77 71.4
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 3.6e-21 104.8 77 71.4
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 3.6e-21 104.8 81 64.2
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 6.1e-21 104.0 89 66.3
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 1.8e-20 102.4 80 70.0
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 3.0e-20 101.7 84 66.7
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 5.2e-20 100.9 91 64.8
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 6.8e-20 100.5 91 65.9
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 1.2e-19 99.8 82 59.8
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 3.1e-17 91.7 80 56.2
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.2e-16 89.7 80 56.2
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.2e-16 89.7 80 56.2
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 2.7e-16 88.6 79 57.0
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.9e-15 85.1 80 51.2
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 5.0e-15 84.3 78 56.4
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 6.6e-15 84.0 89 51.7
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 6.6e-15 84.0 89 51.7
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 6.6e-15 84.0 88 54.5
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 2.5e-14 82.0 88 53.4
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 2.5e-14 82.0 67 55.2
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 7.2e-14 80.5 78 57.7
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 9.5e-14 80.1 84 53.6
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 1.2e-13 79.7 79 50.6
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 1.2e-13 79.7 84 53.6
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 1.2e-13 79.7 78 56.4
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 1.2e-13 79.7 85 51.8
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 1.6e-13 79.3 80 50.0
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 1.6e-13 79.3 81 55.6
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 1.6e-13 79.3 81 50.6
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 2.1e-13 79.0 78 48.7
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 2.1e-13 79.0 84 52.4
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 2.1e-13 79.0 88 55.7
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 3.6e-13 78.2 85 52.9
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 3.6e-13 78.2 85 52.9
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 3.6e-13 78.2 79 51.9
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.0e-13 77.0 76 52.6
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 1.0e-12 76.6 80 48.8
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 1.4e-12 76.3 81 54.3
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 5.2e-12 74.3 79 51.9
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 8.9e-12 73.6 88 53.4
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 2.0e-11 72.4 73 53.4
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 5.7e-11 70.9 94 42.6
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 7.5e-11 70.5 87 48.3
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 9.8e-11 70.1 87 46.0
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.8e-11 70.1 82 48.8
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 1.3e-10 69.7 78 47.4
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 1.7e-10 69.3 86 48.8
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.2e-10 68.9 94 40.4
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 2.8e-10 68.6 80 50.0
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 8.3e-10 67.0 87 44.8
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.4e-09 65.5 80 46.2
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.4e-09 65.5 82 45.1
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.1e-09 65.1 93 39.8
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 3.1e-09 65.1 87 47.1
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 4.1e-09 64.7 71 52.1
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.2e-08 63.2 82 43.9
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-08 63.2 87 44.8
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-08 63.2 87 44.8
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.6e-08 62.8 93 37.6
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.6e-08 62.8 87 44.8
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 2.0e-08 62.4 82 43.9
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 2.0e-08 62.4 82 43.9
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 2.0e-08 62.4 73 49.3
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.0e-08 62.4 80 45.0
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 2.7e-08 62.0 80 46.2
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 2.7e-08 62.0 80 47.5
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.5e-08 61.2 95 40.0
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.5e-08 61.2 95 40.0
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 4.5e-08 61.2 95 40.0
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 4.5e-08 61.2 100 44.0
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.9e-08 60.8 79 43.0
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.9e-08 60.8 79 44.3
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.9e-08 60.8 79 44.3
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 5.9e-08 60.8 93 41.9
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 5.9e-08 60.8 71 46.5
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 5.9e-08 60.8 71 46.5
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 7.8e-08 60.5 76 47.4
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 7.8e-08 60.5 63 54.0
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 7.8e-08 60.5 63 54.0
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 7.8e-08 60.5 63 54.0
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 1.0e-07 60.1 73 47.9
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 1.0e-07 60.1 87 43.7
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.0e-07 60.1 87 43.7
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 1.0e-07 60.1 72 48.6
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 1.0e-07 60.1 85 43.5
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.7e-07 59.3 86 41.9
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-07 59.3 79 43.0
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.7e-07 59.3 79 46.8
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 1.7e-07 59.3 75 46.7
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.3e-07 58.9 75 46.7
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 2.3e-07 58.9 79 44.3
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 2.3e-07 58.9 86 34.9
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 2.9e-07 58.5 81 44.4
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 2.9e-07 58.5 82 43.9
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 2.9e-07 58.5 87 37.9
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 3.9e-07 58.2 82 43.9
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.9e-07 58.2 79 41.8
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 3.9e-07 58.2 78 48.7
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 5.0e-07 57.8 79 45.6
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 5.0e-07 57.8 60 58.3
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.0e-07 57.8 79 43.0
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 5.0e-07 57.8 91 39.6
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 6.6e-07 57.4 81 46.9
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.6e-07 57.4 79 43.0
MELO3C025018.2 Cucumis melo HOM05D002165 ORTHO05D001531 8.6e-07 57.0 93 38.7
MELO3C025021.2 Cucumis melo HOM05D002165 ORTHO05D001531 8.6e-07 57.0 86 41.9
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.6e-07 57.0 79 41.8
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.6e-07 57.0 85 41.2
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 8.6e-07 57.0 79 43.0
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 8.6e-07 57.0 90 44.4
Aqoxy2G02476 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 1.1e-06 56.6 79 40.5
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.1e-06 56.6 71 43.7
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.1e-06 56.6 82 43.9
Gohir.A09G242300 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.5e-06 56.2 77 44.2
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 1.5e-06 56.2 89 43.8
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.9e-06 55.8 70 48.6
FvH4_4g21750 Fragaria vesca HOM05D002165 ORTHO05D001531 1.9e-06 55.8 72 45.8
FAN07G0342 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.9e-06 55.8 72 45.8
FAN12G3878 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.9e-06 55.8 72 45.8
FAN17G1996 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.9e-06 55.8 72 45.8
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 1.9e-06 55.8 72 43.1
Gohir.A13G177800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.9e-06 55.8 88 43.2
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.9e-06 55.8 75 44.0
COL.COLO4_05484 Corchorus olitorius HOM05D002165 ORTHO05D001531 2.5e-06 55.5 91 44.0
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.5e-06 55.5 79 40.5
Gohir.A02G059800 Gossypium hirsutum HOM05D002165 ORTHO05D001531 2.5e-06 55.5 76 39.5
Gohir.D02G065400 Gossypium hirsutum HOM05D002165 ORTHO05D001531 2.5e-06 55.5 76 39.5
Gohir.D09G243000 Gossypium hirsutum HOM05D002165 ORTHO05D001531 2.5e-06 55.5 77 42.9
Gorai.005G074100 Gossypium raimondii HOM05D002165 ORTHO05D001531 2.5e-06 55.5 76 39.5
Gorai.006G266800 Gossypium raimondii HOM05D002165 ORTHO05D001531 2.5e-06 55.5 77 42.9
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.3e-06 55.1 98 32.7
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 3.3e-06 55.1 80 48.8
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 3.3e-06 55.1 71 52.1
RcHm_v2.0_Chr4g0427981 Rosa chinensis HOM05D002165 ORTHO05D001531 3.3e-06 55.1 72 45.8
Sed0027158 Sechium edule HOM05D002165 ORTHO05D001531 3.3e-06 55.1 94 37.2
CiPaw.01G127300 Carya illinoinensis HOM05D002165 ORTHO05D001531 4.3e-06 54.7 76 43.4
Thecc.09G084900 Theobroma cacao HOM05D002165 ORTHO05D001531 4.3e-06 54.7 84 42.9
Dinv24517 Davidia involucrata HOM05D002165 ORTHO05D001531 5.6e-06 54.3 61 49.2
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 7.3e-06 53.9 89 38.2
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 9.5e-06 53.5 69 42.0
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 9.5e-06 53.5 66 45.5
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.5e-06 53.5 87 35.6
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 9.5e-06 53.5 80 42.5
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 9.5e-06 53.5 80 45.0
QL06p014681 Quercus lobata HOM05D002165 ORTHO05D001531 9.5e-06 53.5 65 46.2
Thecc.04G314700 Theobroma cacao HOM05D002165 ORTHO05D001531 9.5e-06 53.5 78 35.9


User provided reference genes

Program Settings