Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g100600 Pisum sativum HOM05D055250 ORTHO05D322686 5.5e-65 250.8 120 100.0
Psat2g100640 Pisum sativum HOM05D055250 ORTHO05D000290 1.1e-62 243.0 120 97.5
Psat7g008960 Pisum sativum HOM05D000281 ORTHO05D000290 5.7e-14 81.3 51 78.4
TPR.G32711 Trifolium pratense HOM05D000281 ORTHO05D000290 4.5e-11 71.6 51 68.6
Medtr4g120830 Medicago truncatula HOM05D000281 ORTHO05D000290 3.8e-10 68.6 51 64.7
Glyma.08G043800 Glycine max HOM05D000281 ORTHO05D000290 6.6e-10 67.8 41 78.0
Lj4g0009141 Lotus japonicus HOM05D000281 ORTHO05D000290 8.6e-10 67.4 41 78.0
Ca_17298_v3 Cicer arietinum L. HOM05D000281 ORTHO05D000290 1.5e-09 66.6 41 75.6
Ca_17305_v3 Cicer arietinum L. HOM05D000281 ORTHO05D000290 1.5e-09 66.6 41 75.6
Medtr4g120825 Medicago truncatula HOM05D000281 ORTHO05D000290 1.9e-09 66.2 51 62.7
Medtr8g104765 Medicago truncatula HOM05D000281 ORTHO05D000290 1.9e-09 66.2 51 62.7
Glyma.05G236600 Glycine max HOM05D000281 ORTHO05D000290 9.5e-09 63.9 41 73.2
Phvul.002G318700 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 1.2e-08 63.5 41 73.2
VMungo0251G2990 Vigna mungo HOM05D000281 ORTHO05D000290 1.2e-08 63.5 41 73.2
VMungo1215G3063 Vigna mungo HOM05D000281 ORTHO05D000290 6.1e-08 61.2 52 59.6
Glyma.09G122000 Glycine max HOM05D000281 ORTHO05D000290 8.0e-08 60.8 52 59.6
Lalb_Chr05g0222341 Lupinus albus HOM05D000281 ORTHO05D000290 1.0e-07 60.5 41 70.7
MD16G1021700 Malus domestica HOM05D000281 ORTHO05D000290 1.0e-07 60.5 41 70.7
CANSAT01G1338 Cannabis sativa HOM05D000281 ORTHO05D000290 1.4e-07 60.1 41 65.9
Cpa.g.c25723.3 Carica papaya HOM05D000281 ORTHO05D000290 2.3e-07 59.3 41 68.3
CiPaw.05G191700 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.0e-07 58.9 41 68.3
Phvul.003G021400 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 3.0e-07 58.9 52 57.7
MD00G1133700 Malus domestica HOM05D000281 ORTHO05D000290 4.0e-07 58.5 41 68.3
FAN12G2605 Fragaria x ananassa HOM05D000036 ORTHO05D000095 5.2e-07 58.2 62 48.4
Cfa014989 Carpinus fangiana HOM05D000281 ORTHO05D000290 6.8e-07 57.8 41 68.3
Gohir.A03G119300 Gossypium hirsutum HOM05D000281 ORTHO05D000290 6.8e-07 57.8 41 68.3
Gohir.D02G142700 Gossypium hirsutum HOM05D000281 ORTHO05D000290 8.9e-07 57.4 41 68.3
Gorai.005G160200 Gossypium raimondii HOM05D000281 ORTHO05D000290 8.9e-07 57.4 41 68.3
Thecc.02G288500 Theobroma cacao HOM05D000281 ORTHO05D000290 8.9e-07 57.4 41 68.3
Duzib251G0843 Durio zibethinus HOM05D000281 ORTHO05D000290 1.2e-06 57.0 41 65.9
COL.COLO4_13091 Corchorus olitorius HOM05D000281 ORTHO05D000290 1.5e-06 56.6 41 63.4
Haze_10928 Corylus avellana HOM05D000281 ORTHO05D000290 3.4e-06 55.5 41 63.4
Lj3P866T20 Lonicera japonica HOM05D000281 ORTHO05D000290 3.4e-06 55.5 54 50.0
Lalb_Chr16g0387781 Lupinus albus HOM05D000281 ORTHO05D000290 3.4e-06 55.5 41 65.9
Prupe.1G330900 Prunus persica HOM05D000281 ORTHO05D000290 3.4e-06 55.5 41 65.9
Rhsim09G0092900 Rhododendron simsii HOM05D000281 ORTHO05D000290 3.4e-06 55.5 54 51.9
RhsimUnG0026500 Rhododendron simsii HOM05D000281 ORTHO05D000290 3.4e-06 55.5 54 51.9
Aqoxy3G04082 Aquilegia oxysepala HOM05D000281 ORTHO05D000290 4.4e-06 55.1 63 47.6
Gohir.A01G145318 Gossypium hirsutum HOM05D000281 ORTHO05D000290 4.4e-06 55.1 41 65.9
Gohir.D01G142600 Gossypium hirsutum HOM05D000281 ORTHO05D000290 4.4e-06 55.1 41 65.9
Gorai.002G175900 Gossypium raimondii HOM05D000281 ORTHO05D000290 4.4e-06 55.1 41 65.9
Manes.17G081300 Manihot esculenta HOM05D000281 ORTHO05D000290 4.4e-06 55.1 41 63.4
PGR142G1809 Punica granatum HOM05D000281 ORTHO05D000290 4.4e-06 55.1 41 63.4
CSS0033953 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 5.7e-06 54.7 54 53.7
FAN17G1380 Fragaria x ananassa HOM05D000281 ORTHO05D000290 5.7e-06 54.7 50 56.0
Gohir.A12G151400 Gossypium hirsutum HOM05D000281 ORTHO05D000290 5.7e-06 54.7 41 61.0
Gohir.D12G155100 Gossypium hirsutum HOM05D000281 ORTHO05D000290 7.5e-06 54.3 41 61.0
Gorai.008G167500 Gossypium raimondii HOM05D000281 ORTHO05D000290 7.5e-06 54.3 41 61.0
Phvul.003G021500 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 7.5e-06 54.3 41 63.4
Duzib268G1482 Durio zibethinus HOM05D000281 ORTHO05D000290 9.8e-06 53.9 41 61.0
FAN22G2095 Fragaria x ananassa HOM05D000281 ORTHO05D000290 9.8e-06 53.9 50 54.0
Nitab4.5_0000621g0120 Nicotiana tabacum HOM05D000281 ORTHO05D000290 9.8e-06 53.9 41 61.0
Nitab4.5_0004546g0050 Nicotiana tabacum HOM05D000281 ORTHO05D000290 9.8e-06 53.9 41 61.0


User provided reference genes

Program Settings