Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g096600 Pisum sativum HOM05D004560 ORTHO05D005540 1.1e-50 203.0 98 100.0
Psat2g096560 Pisum sativum HOM05D001260 ORTHO05D004134 3.3e-28 128.3 91 79.1
Psat4g089080 Pisum sativum HOM05D004560 ORTHO05D005540 1.8e-26 122.5 91 76.9
Ca_19501_v3 Cicer arietinum L. HOM05D004560 ORTHO05D005540 5.3e-26 120.9 91 73.6
TPR.G10251 Trifolium pratense HOM05D004560 ORTHO05D005540 1.6e-22 109.4 91 69.2
VMungo0251G0843 Vigna mungo HOM05D004560 ORTHO05D005540 1.4e-18 96.3 97 58.8
Phvul.003G244225 Phaseolus vulgaris HOM05D004560 ORTHO05D005540 7.0e-18 94.0 97 58.8
Psat2g096520 Pisum sativum HOM05D004560 ORTHO05D005540 9.1e-18 93.6 90 60.0
Glyma.17G175000 Glycine max HOM05D004560 ORTHO05D005540 1.2e-17 93.2 93 59.1
arahy.Tifrunner.gnm1.ann1.TDMJ0N Arachis hypogaea HOM05D004560 ORTHO05D005540 1.6e-17 92.8 93 57.0
Lj4g0000036 Lotus japonicus HOM05D004560 ORTHO05D005540 2.0e-17 92.4 91 60.4
arahy.Tifrunner.gnm1.ann1.IC24VR Arachis hypogaea HOM05D004560 ORTHO05D005540 3.5e-17 91.7 93 55.9
Glyma.05G096000 Glycine max HOM05D004560 ORTHO05D005540 7.7e-17 90.5 91 59.3
Prupe.7G134200 Prunus persica HOM05D004560 ORTHO05D005540 2.3e-13 79.0 94 47.9
Actinidia16495 Actinidia chinensis HOM05D004560 ORTHO05D005540 1.3e-11 73.2 91 47.3
Gorai.008G075200 Gossypium raimondii HOM05D004560 ORTHO05D005540 1.7e-11 72.8 91 49.5
Ciclev10024681m.g Citrus clementina HOM05D004560 ORTHO05D005540 2.2e-11 72.4 97 47.4
Gohir.A12G070800 Gossypium hirsutum HOM05D004560 ORTHO05D005540 2.2e-11 72.4 92 48.9
Gohir.D12G068700 Gossypium hirsutum HOM05D004560 ORTHO05D005540 2.2e-11 72.4 92 48.9
MD15G1283100 Malus domestica HOM05D004560 ORTHO05D005540 2.8e-11 72.0 97 47.4
Dinv39857 Davidia involucrata HOM05D004560 ORTHO05D005540 3.7e-11 71.6 95 45.3
Duzib187G0053 Durio zibethinus HOM05D004560 ORTHO05D005540 3.7e-11 71.6 94 47.9
Cfa004012 Carpinus fangiana HOM05D004560 ORTHO05D005540 4.8e-11 71.2 94 46.8
CSS0026663 Camellia sinensis var. sinensis HOM05D004560 ORTHO05D005540 8.3e-11 70.5 94 45.7
Cpa.g.sc55.156 Carica papaya HOM05D004560 ORTHO05D005540 8.3e-11 70.5 94 45.7
Haze_15410 Corylus avellana HOM05D004560 ORTHO05D005540 8.3e-11 70.5 93 46.2
Potri.007G043300 Populus trichocarpa HOM05D004560 ORTHO05D005540 1.4e-10 69.7 102 42.2
Lalb_Chr16g0378501 Lupinus albus HOM05D004560 ORTHO05D005540 3.1e-10 68.6 92 47.8
RcHm_v2.0_Chr2g0105371 Rosa chinensis HOM05D004560 ORTHO05D005540 3.1e-10 68.6 91 48.4
CANSAT01G1534 Cannabis sativa HOM05D004560 ORTHO05D005540 4.1e-10 68.2 95 45.3
Thecc.01G055000 Theobroma cacao HOM05D004560 ORTHO05D005540 4.1e-10 68.2 93 49.5
COL.COLO4_11405 Corchorus olitorius HOM05D004560 ORTHO05D005540 7.0e-10 67.4 90 48.9
FvH4_5g28170 Fragaria vesca HOM05D004560 ORTHO05D005540 1.6e-09 66.2 91 48.4
Potri.005G137700 Populus trichocarpa HOM05D004560 ORTHO05D005540 1.6e-09 66.2 103 39.8
Actinidia03789 Actinidia chinensis HOM05D004560 ORTHO05D005540 2.0e-09 65.9 92 42.4
CiPaw.02G008700 Carya illinoinensis HOM05D004560 ORTHO05D005540 3.5e-09 65.1 94 41.5
FAN18G2522 Fragaria x ananassa HOM05D004560 ORTHO05D005540 4.5e-09 64.7 95 44.2
MD02G1171200 Malus domestica HOM05D004560 ORTHO05D005540 5.9e-09 64.3 94 41.5
FAN08G1993 Fragaria x ananassa HOM05D004560 ORTHO05D005540 7.7e-09 63.9 91 47.3
Lalb_Chr09g0323121 Lupinus albus HOM05D004560 ORTHO05D005540 7.7e-09 63.9 90 46.7
Duzib147G0064 Durio zibethinus HOM05D004560 ORTHO05D005540 1.3e-08 63.2 97 45.4
QL06p041719 Quercus lobata HOM05D004560 ORTHO05D005540 1.3e-08 63.2 101 42.6
Sabra07G0038200 Salix brachista HOM05D004560 ORTHO05D005540 1.3e-08 63.2 101 42.6
TAR376G0591 Trochodendron aralioides HOM05D004560 ORTHO05D005540 1.3e-08 63.2 92 44.6
TWI09G1111 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 2.9e-08 62.0 97 39.2
Nn1g04868 Nelumbo nucifera HOM05D004560 ORTHO05D005540 3.8e-08 61.6 97 41.2
Lalb_Chr09g0323141 Lupinus albus HOM05D004560 ORTHO05D005540 5.0e-08 61.2 97 44.3
TAR628G0564 Trochodendron aralioides HOM05D004560 ORTHO05D005540 5.0e-08 61.2 92 45.7
Gohir.A12G072000 Gossypium hirsutum HOM05D004560 ORTHO05D005540 6.5e-08 60.8 92 43.5
Gorai.008G075400 Gossypium raimondii HOM05D004560 ORTHO05D005540 6.5e-08 60.8 92 43.5
Gohir.D12G068900 Gossypium hirsutum HOM05D004560 ORTHO05D005540 8.5e-08 60.5 92 44.6
Duzib264G0542 Durio zibethinus HOM05D004560 ORTHO05D005540 1.1e-07 60.1 96 44.8
CsaV3_6G043220 Cucumis sativus L. HOM05D004560 ORTHO05D005540 1.5e-07 59.7 95 40.0
Oeu039071.1 Olea europaea HOM05D004560 ORTHO05D005540 1.5e-07 59.7 97 40.2
FAN04G2449 Fragaria x ananassa HOM05D004560 ORTHO05D005540 1.9e-07 59.3 91 46.2
vmacro17949 Vaccinium macrocarpon HOM05D004560 ORTHO05D005540 3.2e-07 58.5 94 36.2
TWI53G0832 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 5.5e-07 57.8 93 38.7
TWI73G0239 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 7.2e-07 57.4 93 39.8
Nitab4.5_0002016g0010 Nicotiana tabacum HOM05D004560 ORTHO05D005540 9.4e-07 57.0 92 39.1
Cc07_g19160 Coffea canephora HOM05D004560 ORTHO05D005540 2.1e-06 55.8 93 39.8
Nitab4.5_0001034g0140 Nicotiana tabacum HOM05D004560 ORTHO05D005540 2.7e-06 55.5 93 39.8
MBI02_g02993_MAGBIO Magnolia biondii HOM05D004560 ORTHO05D005540 3.6e-06 55.1 88 43.2
Rhsim08G0100900 Rhododendron simsii HOM05D004560 ORTHO05D005540 3.6e-06 55.1 86 39.5
Manes.12G101400 Manihot esculenta HOM05D004560 ORTHO05D005540 8.0e-06 53.9 88 36.4
Psat1g018440 Pisum sativum HOM05D004560 ORTHO05D005540 8.0e-06 53.9 24 100.0
Psat5g208000 Pisum sativum HOM05D004560 ORTHO05D005540 8.0e-06 53.9 24 100.0


User provided reference genes

Program Settings