Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g093320 Pisum sativum HOM05D000528 ORTHO05D325327 2.4e-75 285.4 143 100.0
Phvul.010G085000 Phaseolus vulgaris HOM05D000528 ORTHO05D000999 3.3e-08 62.4 62 58.1
DCAR_006872 Daucus carota HOM05D000528 ORTHO05D000999 5.6e-08 61.6 62 59.7
Lalb_Chr12g0208321 Lupinus albus HOM05D000528 ORTHO05D000999 7.3e-08 61.2 62 56.5
Lj3g0007955 Lotus japonicus HOM05D000528 ORTHO05D000999 9.5e-08 60.8 62 56.5
Psat4g195280 Pisum sativum HOM05D000528 ORTHO05D000999 1.6e-07 60.1 36 83.3
Glyma.03G022900 Glycine max HOM05D000528 ORTHO05D000999 2.8e-07 59.3 36 80.6
Lalb_Chr07g0189711 Lupinus albus HOM05D000528 ORTHO05D000999 2.8e-07 59.3 62 53.2
Ca_07825_v3 Cicer arietinum L. HOM05D000528 ORTHO05D000999 3.6e-07 58.9 62 54.8
TPR.G21736 Trifolium pratense HOM05D000528 ORTHO05D000999 3.6e-07 58.9 36 80.6
CiPaw.01G261100 Carya illinoinensis HOM05D000528 ORTHO05D000999 4.7e-07 58.5 60 56.7
Glyma.01G144200 Glycine max HOM05D000528 ORTHO05D000999 4.7e-07 58.5 62 54.8
Glyma.18G221200 Glycine max HOM05D000528 ORTHO05D000999 4.7e-07 58.5 62 54.8
Sed0023409 Sechium edule HOM05D000528 ORTHO05D000999 4.7e-07 58.5 77 45.5
Hund27352 Selenicereus undatus HOM05D000528 ORTHO05D000999 4.7e-07 58.5 36 80.6
TPR.G26953 Trifolium pratense HOM05D000528 ORTHO05D000999 4.7e-07 58.5 62 56.5
Medtr7g075030 Medicago truncatula HOM05D000528 ORTHO05D000999 6.2e-07 58.2 62 54.8
Medtr8g036080 Medicago truncatula HOM05D000528 ORTHO05D000999 6.2e-07 58.2 36 77.8
Psat3g115480 Pisum sativum HOM05D000528 ORTHO05D000999 6.2e-07 58.2 60 56.7
arahy.Tifrunner.gnm1.ann1.RG5BSU Arachis hypogaea HOM05D000528 ORTHO05D000999 8.1e-07 57.8 62 53.2
arahy.Tifrunner.gnm1.ann1.V729I7 Arachis hypogaea HOM05D000528 ORTHO05D000999 8.1e-07 57.8 62 53.2
VMungo0331G1379 Vigna mungo HOM05D000528 ORTHO05D000999 8.1e-07 57.8 36 77.8
Aa31LG10G15090 Aethionema arabicum HOM05D000528 ORTHO05D000999 1.1e-06 57.4 56 58.9
Lj1g0015849 Lotus japonicus HOM05D000528 ORTHO05D000999 1.1e-06 57.4 36 77.8
Lalb_Chr03g0039411 Lupinus albus HOM05D000528 ORTHO05D000999 1.1e-06 57.4 36 77.8
Lalb_Chr19g0127291 Lupinus albus HOM05D000528 ORTHO05D000999 1.1e-06 57.4 36 75.0
CiPaw.02G166800 Carya illinoinensis HOM05D000528 ORTHO05D000999 1.4e-06 57.0 76 50.0
Ca_23846_v3 Cicer arietinum L. HOM05D000528 ORTHO05D000999 1.4e-06 57.0 36 77.8
GSVIVG01027623001 Vitis vinifera HOM05D000528 ORTHO05D000999 1.4e-06 57.0 62 53.2
Haze_16826 Corylus avellana HOM05D000528 ORTHO05D000999 1.8e-06 56.6 60 55.0
Manes.01G265100 Manihot esculenta HOM05D000528 ORTHO05D000999 1.8e-06 56.6 36 75.0
Manes.05G044300 Manihot esculenta HOM05D000528 ORTHO05D000999 1.8e-06 56.6 36 75.0
arahy.Tifrunner.gnm1.ann1.3JG7A2 Arachis hypogaea HOM05D000528 ORTHO05D000999 2.4e-06 56.2 62 53.2
arahy.Tifrunner.gnm1.ann1.W1RKBH Arachis hypogaea HOM05D000528 ORTHO05D000999 2.4e-06 56.2 62 53.2
HanXRQChr13g0425191 Helianthus annuus HOM05D000528 ORTHO05D000999 3.1e-06 55.8 132 30.3
Phvul.008G075600 Phaseolus vulgaris HOM05D000528 ORTHO05D000999 3.1e-06 55.8 62 53.2
Sabra02G0117900 Salix brachista HOM05D000528 ORTHO05D000999 3.1e-06 55.8 60 53.3
VMungo1383G1426 Vigna mungo HOM05D000528 ORTHO05D000999 3.1e-06 55.8 62 53.2
Aa31LG1G11290 Aethionema arabicum HOM05D000528 ORTHO05D000999 4.0e-06 55.5 64 48.4
ClCG05G002160 Citrullus lanatus HOM05D000528 ORTHO05D000999 4.0e-06 55.5 64 51.6
COL.COLO4_12559 Corchorus olitorius HOM05D000528 ORTHO05D000999 4.0e-06 55.5 65 46.2
MELO3C006181.2 Cucumis melo HOM05D000528 ORTHO05D000999 4.0e-06 55.5 76 46.1
HanXRQChr16g0521611 Helianthus annuus HOM05D000528 ORTHO05D000999 4.0e-06 55.5 60 51.7
Peaxi162Scf00021g01518 Petunia axillaris HOM05D000528 ORTHO05D000999 4.0e-06 55.5 60 51.7
Duzib133G0584 Durio zibethinus HOM05D000528 ORTHO05D000999 5.2e-06 55.1 60 51.7
Nitab4.5_0000457g0380 Nicotiana tabacum HOM05D000528 ORTHO05D000999 5.2e-06 55.1 36 72.2
Nitab4.5_0002993g0060 Nicotiana tabacum HOM05D000528 ORTHO05D000999 5.2e-06 55.1 36 72.2
CSS0036188 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D000999 6.8e-06 54.7 36 72.2
CSS0048094 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D000999 6.8e-06 54.7 36 72.2
MD02G1202100 Malus domestica HOM05D000528 ORTHO05D000999 6.8e-06 54.7 36 72.2
Prupe.2G146800 Prunus persica HOM05D000528 ORTHO05D000999 6.8e-06 54.7 36 72.2
PGR042G1274 Punica granatum HOM05D000528 ORTHO05D000999 6.8e-06 54.7 36 72.2
AL1G10360 Arabidopsis lyrata HOM05D000528 ORTHO05D000999 8.9e-06 54.3 64 50.0
EL10Ac1g00906 Beta vulgaris HOM05D000528 ORTHO05D000999 8.9e-06 54.3 36 75.0
CARHR000390 Cardamine hirsuta HOM05D000528 ORTHO05D000999 8.9e-06 54.3 64 50.0
Duzib138G0174 Durio zibethinus HOM05D000528 ORTHO05D000999 8.9e-06 54.3 65 46.2
MD07G1123200 Malus domestica HOM05D000528 ORTHO05D000999 8.9e-06 54.3 36 72.2


User provided reference genes

Program Settings