Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g092240 Pisum sativum HOM05D038845 ORTHO05D000766 2.2e-60 235.3 113 100.0
Psat7g054520 Pisum sativum HOM05D000660 ORTHO05D000766 1.2e-48 196.4 113 86.7
Psat3g111560 Pisum sativum HOM05D038845 ORTHO05D000766 1.5e-43 179.5 112 81.2
TPR.G6210 Trifolium pratense HOM05D000660 ORTHO05D000766 3.7e-31 138.3 141 56.7
Psat0s3867g0040 Pisum sativum HOM05D002716 ORTHO05D004493 4.9e-31 137.9 84 85.7
Medtr8g090205 Medicago truncatula HOM05D000660 ORTHO05D000766 9.2e-30 133.7 140 57.1
Ca_17740_v3 Cicer arietinum L. HOM05D000660 ORTHO05D000766 3.0e-25 118.6 138 50.7
Lj4g0014295 Lotus japonicus HOM05D000660 ORTHO05D000766 2.0e-24 115.9 132 51.5
Glyma.08G135200 Glycine max HOM05D000660 ORTHO05D000766 1.4e-17 93.2 135 45.2
VMungo0251G0614 Vigna mungo HOM05D000660 ORTHO05D000766 1.8e-17 92.8 137 43.8
Glyma.05G178200 Glycine max HOM05D000660 ORTHO05D000766 1.2e-16 90.1 135 43.0
Phvul.002G256500 Phaseolus vulgaris HOM05D000660 ORTHO05D000766 1.2e-16 90.1 132 45.5
Medtr8g090200 Medicago truncatula HOM05D000660 ORTHO05D000766 2.2e-15 85.9 134 43.3
arahy.Tifrunner.gnm1.ann1.XUEC37 Arachis hypogaea HOM05D000660 ORTHO05D000766 2.5e-11 72.4 125 39.2
arahy.Tifrunner.gnm1.ann1.V3UUR8 Arachis hypogaea HOM05D000660 ORTHO05D000766 4.3e-11 71.6 125 39.2
Actinidia06563 Actinidia chinensis HOM05D000660 ORTHO05D000766 2.1e-10 69.3 131 37.4
Dinv21899 Davidia involucrata HOM05D000660 ORTHO05D000766 2.3e-09 65.9 128 35.9
Actinidia20011 Actinidia chinensis HOM05D000660 ORTHO05D000766 2.0e-08 62.8 131 35.9
Dinv13193 Davidia involucrata HOM05D000660 ORTHO05D000766 2.6e-08 62.4 117 37.6
Duzib187G1033 Durio zibethinus HOM05D000660 ORTHO05D000766 3.4e-08 62.0 124 33.9
CSS0020857 Camellia sinensis var. sinensis HOM05D000660 ORTHO05D000766 5.8e-08 61.2 128 35.2
Thecc.01G101000 Theobroma cacao HOM05D000660 ORTHO05D000766 5.8e-08 61.2 124 37.1
TWI74G0942 Tripterygium wilfordii HOM05D000660 ORTHO05D000766 2.2e-07 59.3 124 33.1
CiPaw.03G142500 Carya illinoinensis HOM05D000660 ORTHO05D000766 3.7e-07 58.5 123 37.4
Cc07_g15120 Coffea canephora HOM05D000660 ORTHO05D000766 3.7e-07 58.5 109 36.7
COL.COLO4_27250 Corchorus olitorius HOM05D000660 ORTHO05D000766 3.7e-07 58.5 118 38.1
Lj4C892G2 Lonicera japonica HOM05D000660 ORTHO05D000766 3.7e-07 58.5 127 30.7
Rhsim10G0163400 Rhododendron simsii HOM05D000660 ORTHO05D000766 3.7e-07 58.5 117 35.0
Ciclev10024764m.g Citrus clementina HOM05D000660 ORTHO05D000766 4.9e-07 58.2 125 35.2
Atru.chr4.48 Acer truncatum HOM05D000660 ORTHO05D000766 6.4e-07 57.8 120 35.0
vmacro12961 Vaccinium macrocarpon HOM05D000660 ORTHO05D000766 6.4e-07 57.8 114 36.0
COL.COLO4_27252 Corchorus olitorius HOM05D000660 ORTHO05D000766 1.4e-06 56.6 112 37.5


User provided reference genes

Program Settings