Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g089280 Pisum sativum HOM05D004726 ORTHO05D005986 1.1e-198 696.4 340 100.0
Psat1g035560 Pisum sativum HOM05D000639 ORTHO05D003485 1.8e-57 227.3 119 89.9
Psat1g083400 Pisum sativum HOM05D004726 ORTHO05D005986 3.5e-40 169.9 104 81.7
TPR.G7511 Trifolium pratense HOM05D004726 ORTHO05D005986 3.4e-35 153.3 105 74.3
Ca_04399_v3 Cicer arietinum L. HOM05D004726 ORTHO05D005986 5.4e-33 146.0 104 71.2
Medtr6g022320 Medicago truncatula HOM05D004726 ORTHO05D005986 6.6e-31 139.0 90 72.2
Lj2g0016129 Lotus japonicus HOM05D004726 ORTHO05D005986 5.6e-30 136.0 105 65.7
arahy.Tifrunner.gnm1.ann1.Q8ZL0R Arachis hypogaea HOM05D004726 ORTHO05D005986 8.0e-29 132.1 106 63.2
Lalb_Chr21g0317631 Lupinus albus HOM05D004726 ORTHO05D005986 1.4e-28 131.3 108 64.8
VMungo0464G1053 Vigna mungo HOM05D004726 ORTHO05D005986 1.4e-28 131.3 105 65.7
arahy.Tifrunner.gnm1.ann1.2353RE Arachis hypogaea HOM05D004726 ORTHO05D005986 1.8e-28 131.0 106 62.3
Phvul.004G058000 Phaseolus vulgaris HOM05D004726 ORTHO05D005986 2.3e-28 130.6 105 63.8
Lalb_Chr22g0360561 Lupinus albus HOM05D004726 ORTHO05D005986 1.5e-27 127.9 109 60.6
Lj1g0014024 Lotus japonicus HOM05D004726 ORTHO05D005986 7.5e-27 125.6 106 61.3
Glyma.05G072300 Glycine max HOM05D004726 ORTHO05D005986 4.9e-26 122.9 108 61.1
Aqoxy5G03586 Aquilegia oxysepala HOM05D004726 ORTHO05D005986 6.4e-26 122.5 106 58.5
CANSAT64G1163 Cannabis sativa HOM05D004726 ORTHO05D005986 8.3e-26 122.1 109 57.8
Phvul.008G146800 Phaseolus vulgaris HOM05D004726 ORTHO05D005986 1.4e-25 121.3 109 56.9
Nitab4.5_0004776g0030 Nicotiana tabacum HOM05D004726 ORTHO05D005986 1.8e-25 120.9 107 59.8
ClCG05G012910 Citrullus lanatus HOM05D004726 ORTHO05D005986 2.4e-25 120.6 109 57.8
Duzib187G0212 Durio zibethinus HOM05D004726 ORTHO05D005986 2.4e-25 120.6 107 60.7
Potri.001G336400 Populus trichocarpa HOM05D004726 ORTHO05D005986 2.4e-25 120.6 103 61.2
THA.LOC104821108 Tarenaya hassleriana HOM05D004726 ORTHO05D005986 2.4e-25 120.6 99 59.6
TPR.G9063 Trifolium pratense HOM05D004726 ORTHO05D005986 3.2e-25 120.2 106 62.3
Nn3g16582 Nelumbo nucifera HOM05D004726 ORTHO05D005986 5.4e-25 119.4 99 58.6
CiPaw.03G049600 Carya illinoinensis HOM05D004726 ORTHO05D005986 7.0e-25 119.0 102 57.8
Nn4g22464 Nelumbo nucifera HOM05D004726 ORTHO05D005986 7.0e-25 119.0 93 61.3
Sed0012188 Sechium edule HOM05D004726 ORTHO05D005986 9.2e-25 118.6 109 55.0
Ca_03877_v3 Cicer arietinum L. HOM05D004726 ORTHO05D005986 1.2e-24 118.2 106 57.5
CsaV3_3G027570 Cucumis sativus L. HOM05D004726 ORTHO05D005986 1.6e-24 117.9 109 56.0
Lju41A46T85 Lonicera japonica HOM05D004726 ORTHO05D005986 1.6e-24 117.9 104 56.7
Manes.17G107900 Manihot esculenta HOM05D004726 ORTHO05D005986 1.6e-24 117.9 103 58.3
CSS0005841 Camellia sinensis var. sinensis HOM05D004726 ORTHO05D005986 2.0e-24 117.5 104 56.7
Cpa.g.sc130.48 Carica papaya HOM05D004726 ORTHO05D005986 2.0e-24 117.5 107 57.0
FAN02G2743 Fragaria x ananassa HOM05D004726 ORTHO05D005986 2.0e-24 117.5 99 59.6
FAN05G3820 Fragaria x ananassa HOM05D004726 ORTHO05D005986 2.0e-24 117.5 99 59.6
MD17G1018800 Malus domestica HOM05D004726 ORTHO05D005986 2.0e-24 117.5 78 70.5
Medtr0044s0180 Medicago truncatula HOM05D004726 ORTHO05D005986 2.0e-24 117.5 106 58.5
Peaxi162Scf00205g00121 Petunia axillaris HOM05D004726 ORTHO05D005986 2.0e-24 117.5 101 58.4
QL02p073257 Quercus lobata HOM05D004726 ORTHO05D005986 2.0e-24 117.5 101 56.4
Solyc05g008260.3 Solanum lycopersicum HOM05D004726 ORTHO05D005986 2.0e-24 117.5 107 56.1
Atru.chr3.1245 Acer truncatum HOM05D004726 ORTHO05D005986 2.7e-24 117.1 101 58.4
CSS0026983 Camellia sinensis var. sinensis HOM05D004726 ORTHO05D005986 2.7e-24 117.1 102 58.8
MELO3C014786.2 Cucumis melo HOM05D004726 ORTHO05D005986 2.7e-24 117.1 78 70.5
Sopen05g004100 Solanum pennellii HOM05D004726 ORTHO05D005986 2.7e-24 117.1 107 56.1
Glyma.16G063900 Glycine max HOM05D004726 ORTHO05D005986 3.5e-24 116.7 101 56.4
Oeu033801.1 Olea europaea HOM05D004726 ORTHO05D005986 4.6e-24 116.3 83 63.9
RcHm_v2.0_Chr2g0174041 Rosa chinensis HOM05D004726 ORTHO05D005986 4.6e-24 116.3 100 59.0
Sabra16G0217200 Salix brachista HOM05D004726 ORTHO05D005986 4.6e-24 116.3 103 59.2
PGSC0003DMG400030549 Solanum tuberosum HOM05D004726 ORTHO05D005986 4.6e-24 116.3 107 55.1
Actinidia36156 Actinidia chinensis HOM05D004726 ORTHO05D005986 5.9e-24 115.9 103 55.3
CAN.G1334.7 Capsicum annuum HOM05D004726 ORTHO05D005986 5.9e-24 115.9 76 69.7
PSO017G1160 Papaver somniferum HOM05D004726 ORTHO05D005986 5.9e-24 115.9 108 56.5
Prupe.3G298800 Prunus persica HOM05D004726 ORTHO05D005986 5.9e-24 115.9 98 61.2
Gohir.A09G032200 Gossypium hirsutum HOM05D004726 ORTHO05D005986 7.8e-24 115.5 107 56.1
Sed0019499 Sechium edule HOM05D004726 ORTHO05D005986 7.8e-24 115.5 110 53.6
AL3G10420 Arabidopsis lyrata HOM05D004726 ORTHO05D005986 1.0e-23 115.2 99 58.6
Cfa007289 Carpinus fangiana HOM05D004726 ORTHO05D005986 1.0e-23 115.2 102 55.9
Dinv33391 Davidia involucrata HOM05D004726 ORTHO05D005986 1.0e-23 115.2 101 57.4
Thhalv10020079m.g Eutrema salsugineum HOM05D004726 ORTHO05D005986 1.0e-23 115.2 86 64.0
PSO017G0372 Papaver somniferum HOM05D004726 ORTHO05D005986 1.0e-23 115.2 105 56.2
Gohir.D09G032300 Gossypium hirsutum HOM05D004726 ORTHO05D005986 1.3e-23 114.8 107 56.1
Gorai.006G037200 Gossypium raimondii HOM05D004726 ORTHO05D005986 1.3e-23 114.8 107 56.1
HanXRQChr14g0451431 Helianthus annuus HOM05D004726 ORTHO05D005986 1.3e-23 114.8 98 58.2
Sp3g00330 Schrenkiella parvula HOM05D004726 ORTHO05D005986 1.3e-23 114.8 101 58.4
GSVIVG01003968001 Vitis vinifera HOM05D004726 ORTHO05D005986 1.3e-23 114.8 109 53.2
DCAR_002964 Daucus carota HOM05D004726 ORTHO05D005986 1.7e-23 114.4 104 56.7
FvH4_6g52410 Fragaria vesca HOM05D004726 ORTHO05D005986 2.3e-23 114.0 99 58.6
FAN14G5799 Fragaria x ananassa HOM05D004726 ORTHO05D005986 2.3e-23 114.0 99 58.6
PSO478G3762 Papaver somniferum HOM05D004726 ORTHO05D005986 2.3e-23 114.0 107 57.0
Psat0s1369g0120 Pisum sativum HOM05D004726 ORTHO05D005986 2.3e-23 114.0 104 59.6
COL.COLO4_29260 Corchorus olitorius HOM05D004726 ORTHO05D005986 3.0e-23 113.6 107 57.0
TWI56G1181 Tripterygium wilfordii HOM05D004726 ORTHO05D005986 3.0e-23 113.6 101 57.4
MD09G1018400 Malus domestica HOM05D004726 ORTHO05D005986 5.0e-23 112.8 78 69.2
Aa31LG5G10860 Aethionema arabicum HOM05D004726 ORTHO05D005986 6.6e-23 112.5 103 54.4
Duzib147G0777 Durio zibethinus HOM05D004726 ORTHO05D005986 8.6e-23 112.1 101 58.4
Thecc.04G026000 Theobroma cacao HOM05D004726 ORTHO05D005986 8.6e-23 112.1 107 56.1
CARHR075200 Cardamine hirsuta HOM05D004726 ORTHO05D005986 1.1e-22 111.7 99 58.6
Lsat_1_v5_gn_2_93500 Lactuca sativa HOM05D004726 ORTHO05D005986 1.1e-22 111.7 100 57.0
Cc07_g00350 Coffea canephora HOM05D004726 ORTHO05D005986 1.5e-22 111.3 112 52.7
SHI03847 Sapria himalayana HOM05D004726 ORTHO05D005986 1.5e-22 111.3 106 53.8
BcaC01g04537 Brassica carinata HOM05D004726 ORTHO05D005986 1.9e-22 110.9 83 62.7
Ah.11g044820 Amaranthus hybridus HOM05D004726 ORTHO05D005986 2.5e-22 110.5 104 53.8
AT3G01720 Arabidopsis thaliana HOM05D004726 ORTHO05D005986 2.5e-22 110.5 101 53.5
Haze_14803 Corylus avellana HOM05D004726 ORTHO05D005986 2.5e-22 110.5 96 55.2
Ciclev10014283m.g Citrus clementina HOM05D004726 ORTHO05D005986 3.3e-22 110.2 109 55.0
Oeu048592.1 Olea europaea HOM05D004726 ORTHO05D005986 3.3e-22 110.2 105 52.4
PSO386G0103 Papaver somniferum HOM05D004726 ORTHO05D005986 3.3e-22 110.2 107 56.1
SalBow2G0243 Salvia bowleyana HOM05D004726 ORTHO05D005986 4.3e-22 109.8 79 65.8
Sc07g0004390 Simmondsia chinensis HOM05D004726 ORTHO05D005986 5.6e-22 109.4 107 55.1
SGA_v2.0_scaffold135G34934 Striga asiatica HOM05D004726 ORTHO05D005986 5.6e-22 109.4 79 65.8
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 7.3e-22 109.0 78 65.4
Migut.G00516 Erythranthe guttata HOM05D004726 ORTHO05D005986 7.3e-22 109.0 99 58.6
C03p39450 Brassica napus HOM05D004726 ORTHO05D005986 9.5e-22 108.6 102 53.9
BolC3t16213H Brassica oleracea HOM05D004726 ORTHO05D005986 9.5e-22 108.6 102 53.9
A03p32390 Brassica napus HOM05D004726 ORTHO05D005986 1.6e-21 107.8 104 51.9
BraA03t12409Z Brassica rapa HOM05D004726 ORTHO05D005986 1.6e-21 107.8 104 51.9
Carub.0003s0033 Capsella rubella HOM05D004726 ORTHO05D005986 3.6e-21 106.7 99 55.6
VMungo1383G2700 Vigna mungo HOM05D004726 ORTHO05D005986 3.6e-21 106.7 109 51.4
HPP92_015461 Vanilla planifolia HOM05D004726 ORTHO05D005986 4.7e-21 106.3 83 59.0
PGR083G2241 Punica granatum HOM05D004726 ORTHO05D005986 8.0e-21 105.5 109 53.2
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 1.0e-20 105.1 103 58.3
Eucgr.J02276 Eucalyptus grandis HOM05D004726 ORTHO05D005986 1.0e-20 105.1 111 50.5
Pp3c10_20040 Physcomitrium patens HOM05D004726 ORTHO05D005986 6.8e-20 102.4 85 58.8
AUR62018238 Chenopodium quinoa HOM05D004726 ORTHO05D005986 8.9e-20 102.1 107 50.5
Rhsim05G0094900 Rhododendron simsii HOM05D004726 ORTHO05D005986 8.9e-20 102.1 101 49.5
AUR62037765 Chenopodium quinoa HOM05D004726 ORTHO05D005986 1.5e-19 101.3 106 48.1
Mapoly0014s0026 Marchantia polymorpha HOM05D004726 ORTHO05D005986 7.5e-19 99.0 84 54.8
Hund13042 Selenicereus undatus HOM05D004726 ORTHO05D005986 1.3e-18 98.2 102 50.0
EL10Ac2g03214 Beta vulgaris HOM05D004726 ORTHO05D005986 2.9e-18 97.1 103 50.5
Zm00001eb144300 Zea mays HOM05D004726 ORTHO05D005986 2.7e-16 90.5 78 57.7
Pp3c3_33250 Physcomitrium patens HOM05D004726 ORTHO05D005986 4.6e-16 89.7 78 57.7
SMO117G0207 Selaginella moellendorffii HOM05D004726 ORTHO05D005986 4.6e-16 89.7 78 56.4
Oeu050441.1 Olea europaea HOM05D004726 ORTHO05D005986 1.0e-15 88.6 102 45.1
vmacro05911 Vaccinium macrocarpon HOM05D004726 ORTHO05D005986 1.0e-15 88.6 78 56.4
vmacro05915 Vaccinium macrocarpon HOM05D004726 ORTHO05D005986 1.0e-15 88.6 78 56.4
Os01g0904500 Oryza sativa ssp. japonica HOM05D004726 ORTHO05D005986 1.7e-15 87.8 78 55.1
AagrBONN_evm.TU.Sc2ySwM_344.876 Anthoceros agrestis HOM05D004726 ORTHO05D005986 5.0e-15 86.3 79 57.0
Glyma.19G055500 Glycine max HOM05D004726 ORTHO05D005986 8.6e-15 85.5 86 50.0
Ah.12g055330 Amaranthus hybridus HOM05D004726 ORTHO05D005986 7.3e-14 82.4 52 69.2
Atru.BG.103.p Acer truncatum HOM05D004726 ORTHO05D005986 9.5e-14 82.0 78 51.3
Atru.chr3.2443 Acer truncatum HOM05D004726 ORTHO05D005986 9.5e-14 82.0 78 51.3
Oeu054664.1 Olea europaea HOM05D004726 ORTHO05D005986 1.2e-13 81.6 78 47.4
TAR374G1052 Trochodendron aralioides HOM05D004726 ORTHO05D005986 3.6e-13 80.1 78 51.3
TAR622G0871 Trochodendron aralioides HOM05D004726 ORTHO05D005986 1.7e-10 71.2 78 46.2
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 2.2e-10 70.9 40 82.5
Psat5g191640 Pisum sativum HOM05D004726 ORTHO05D005986 4.9e-10 69.7 80 46.2
Psat2g031000 Pisum sativum HOM05D003141 ORTHO05D003633 1.9e-06 57.8 30 93.3
Psat4g072560 Pisum sativum HOM05D003141 ORTHO05D003633 1.9e-06 57.8 30 93.3
Psat6g090360 Pisum sativum HOM05D005323 ORTHO05D006820 1.9e-06 57.8 30 93.3


User provided reference genes

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