Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g088000 Pisum sativum HOM05D004959 ORTHO05D005961 1.5e-168 596.3 329 100.0
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 2.8e-63 246.5 131 98.5
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.0e-57 228.0 130 89.2
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 1.8e-57 227.3 208 64.9
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 5.3e-54 215.7 130 84.6
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 2.2e-52 210.3 166 68.1
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 7.5e-48 195.3 194 57.2
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.6e-42 177.6 193 54.9
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 2.1e-42 177.2 198 54.0
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 1.8e-41 174.1 129 68.2
TPR.G940 Trifolium pratense HOM05D004959 ORTHO05D005961 2.2e-39 167.2 98 87.8
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 1.6e-37 161.0 130 68.5
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 3.8e-36 156.4 129 64.3
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 5.0e-36 156.0 127 67.7
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 3.3e-35 153.3 165 55.2
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 9.5e-35 151.8 129 62.8
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 1.2e-34 151.4 129 62.8
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 1.6e-34 151.0 148 55.4
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 2.8e-34 150.2 129 61.2
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 2.8e-34 150.2 129 61.2
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 3.6e-34 149.8 140 59.3
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 2.3e-33 147.1 128 59.4
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 1.5e-32 144.4 170 51.8
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 2.0e-32 144.1 164 53.7
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 2.0e-32 144.1 129 56.6
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 4.4e-32 142.9 131 56.5
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 7.5e-32 142.1 131 55.7
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 7.5e-32 142.1 192 48.4
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 1.7e-31 141.0 170 51.2
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 1.7e-31 141.0 159 52.8
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 2.2e-31 140.6 129 58.9
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 2.2e-31 140.6 129 58.9
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 2.2e-31 140.6 131 55.0
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 2.8e-31 140.2 129 59.7
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 8.3e-31 138.7 129 58.9
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.1e-30 138.3 170 50.0
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 1.4e-30 137.9 148 53.4
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 1.8e-30 137.5 164 52.4
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 1.8e-30 137.5 127 59.1
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 1.8e-30 137.5 131 52.7
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 3.1e-30 136.7 141 52.5
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 3.1e-30 136.7 129 54.3
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 3.1e-30 136.7 139 56.1
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 5.4e-30 136.0 128 56.2
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 7.0e-30 135.6 148 51.4
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 7.0e-30 135.6 140 55.7
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 1.2e-29 134.8 158 52.5
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 2.0e-29 134.0 194 46.4
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 3.5e-29 133.3 129 55.8
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 4.5e-29 132.9 131 53.4
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 5.9e-29 132.5 131 51.9
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 1.0e-28 131.7 131 51.1
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 1.3e-28 131.3 141 50.4
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 1.7e-28 131.0 131 51.1
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 2.9e-28 130.2 127 55.1
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 2.9e-28 130.2 132 53.0
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 5.0e-28 129.4 157 51.6
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 6.6e-28 129.0 144 51.4
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 1.1e-27 128.3 129 52.7
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 1.5e-27 127.9 131 50.4
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 1.9e-27 127.5 127 54.3
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 1.9e-27 127.5 131 49.6
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 1.9e-27 127.5 128 54.7
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 4.3e-27 126.3 131 51.1
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 7.3e-27 125.6 133 49.6
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 2.8e-26 123.6 127 54.3
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 2.8e-26 123.6 126 54.0
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 3.6e-26 123.2 130 54.6
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 4.7e-26 122.9 131 50.4
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 4.7e-26 122.9 192 43.2
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 6.1e-26 122.5 149 50.3
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.4e-25 121.3 129 52.7
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 1.4e-25 121.3 127 51.2
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 2.3e-25 120.6 122 53.3
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 4.0e-25 119.8 95 63.2
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 4.0e-25 119.8 176 45.5
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 5.2e-25 119.4 154 48.7
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 5.2e-25 119.4 122 54.1
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 8.9e-25 118.6 154 48.1
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 1.2e-24 118.2 134 50.0
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 1.5e-24 117.9 153 47.7
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 2.0e-24 117.5 153 47.1
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 2.0e-24 117.5 153 47.1
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 5.8e-24 115.9 127 51.2
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 5.8e-24 115.9 129 50.4
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 7.5e-24 115.5 96 59.4
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.9e-22 110.9 139 48.9
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 1.9e-22 110.9 133 50.4
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 2.4e-22 110.5 130 50.0
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 3.5e-21 106.7 131 48.1
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 5.0e-20 102.8 131 42.7
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 6.6e-20 102.4 142 46.5
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 2.8e-18 97.1 129 46.5
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 2.8e-18 97.1 95 57.9
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 6.2e-18 95.9 157 43.3
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 1.1e-17 95.1 131 44.3
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 1.4e-17 94.7 129 44.2
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 1.8e-17 94.4 95 49.5
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 8.9e-17 92.0 146 43.8
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 8.9e-17 92.0 130 39.2
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 3.4e-16 90.1 127 44.1
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 4.4e-16 89.7 163 38.0
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 6.4e-15 85.9 90 52.2
Psat7g042320 Pisum sativum HOM05D011383 ORTHO05D000001 6.4e-15 85.9 50 90.0
BolC3t20557H Brassica oleracea HOM05D000005 ORTHO05D000449 4.1e-14 83.2 88 43.2
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 4.1e-14 83.2 66 68.2
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 5.4e-14 82.8 154 35.7
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 9.2e-14 82.0 131 39.7
C03p82750 Brassica napus HOM05D000005 ORTHO05D000449 3.5e-13 80.1 98 43.9
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 4.6e-13 79.7 96 47.9
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 6.0e-13 79.3 122 36.1
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 1.3e-12 78.2 153 36.6
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 3.9e-12 76.6 130 33.1
BcaC01g00655 Brassica carinata HOM05D004959 ORTHO05D005961 8.6e-12 75.5 128 38.3
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 4.3e-11 73.2 141 36.2
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 1.2e-10 71.6 34 97.1
SHI28140 Sapria himalayana HOM05D004959 ORTHO05D005961 6.8e-09 65.9 95 41.1
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 2.0e-08 64.3 97 44.3
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 1.1e-06 58.5 154 31.8
Psat0s1920g0040 Pisum sativum HOM05D000730 ORTHO05D000578 4.1e-06 56.6 29 93.1
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 9.2e-06 55.5 33 78.8


User provided reference genes

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