Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g085760 Pisum sativum HOM05D001372 ORTHO05D007311 4.5e-45 184.1 87 100.0
Psat1g039160 Pisum sativum HOM05D001372 ORTHO05D007311 2.2e-39 165.2 87 89.7
Ca_20817_v3 Cicer arietinum L. HOM05D001372 ORTHO05D007311 1.9e-38 162.2 87 88.5
Lj3g0024398 Lotus japonicus HOM05D001372 ORTHO05D007311 3.2e-38 161.4 87 86.2
Glyma.11G123600 Glycine max HOM05D001372 ORTHO05D007311 2.0e-37 158.7 87 85.1
Glyma.12G048200 Glycine max HOM05D001372 ORTHO05D007311 1.0e-36 156.4 87 83.9
Phvul.011G050400 Phaseolus vulgaris HOM05D001372 ORTHO05D007311 3.0e-36 154.8 87 81.6
TPR.G10235 Trifolium pratense HOM05D001372 ORTHO05D007311 3.0e-36 154.8 87 86.2
Sed0000118 Sechium edule HOM05D001372 ORTHO05D007311 1.5e-35 152.5 87 83.9
Manes.15G145700 Manihot esculenta HOM05D001372 ORTHO05D007311 4.3e-35 151.0 87 79.3
Manes.17G096600 Manihot esculenta HOM05D001372 ORTHO05D007311 2.1e-34 148.7 87 77.0
Psat5g239440 Pisum sativum HOM05D001372 ORTHO05D007311 2.1e-34 148.7 112 70.5
Psat5g295360 Pisum sativum HOM05D001372 ORTHO05D007311 2.1e-34 148.7 112 70.5
Medtr0311s0010 Medicago truncatula HOM05D001372 ORTHO05D007311 2.3e-33 145.2 87 81.6
MELO3C018416.2 Cucumis melo HOM05D001372 ORTHO05D007311 3.1e-33 144.8 87 78.2
CANSAT80G1477 Cannabis sativa HOM05D001372 ORTHO05D007311 4.0e-33 144.4 87 80.5
CsaV3_7G010120 Cucumis sativus L. HOM05D001372 ORTHO05D007311 4.0e-33 144.4 87 78.2
ClCG02G005510 Citrullus lanatus HOM05D001372 ORTHO05D007311 5.2e-33 144.1 83 79.5
Hma1.2p1_1353F.1_g277710 Hydrangea macrophylla HOM05D001372 ORTHO05D007311 5.2e-33 144.1 87 74.7
Nn2g15585 Nelumbo nucifera HOM05D001372 ORTHO05D007311 6.8e-33 143.7 87 77.0
Medtr4g068370 Medicago truncatula HOM05D001372 ORTHO05D007311 8.9e-33 143.3 87 81.6
Cfa004947 Carpinus fangiana HOM05D001372 ORTHO05D007311 1.2e-32 142.9 87 77.0
DCAR_022076 Daucus carota HOM05D001372 ORTHO05D007311 1.2e-32 142.9 87 78.2
PGR042G3549 Punica granatum HOM05D001372 ORTHO05D007311 1.5e-32 142.5 87 79.3
CiPaw.05G058700 Carya illinoinensis HOM05D001372 ORTHO05D007311 2.0e-32 142.1 87 75.9
Dinv28822 Davidia involucrata HOM05D001372 ORTHO05D007311 2.0e-32 142.1 87 75.9
Haze_02464 Corylus avellana HOM05D001372 ORTHO05D007311 2.6e-32 141.7 87 77.0
arahy.Tifrunner.gnm1.ann1.34YEZP Arachis hypogaea HOM05D001372 ORTHO05D007311 5.8e-32 140.6 87 77.0
Solyc01g109070.2 Solanum lycopersicum HOM05D001372 ORTHO05D007311 5.8e-32 140.6 87 78.2
Sopen01g051270 Solanum pennellii HOM05D001372 ORTHO05D007311 5.8e-32 140.6 87 78.2
TWI38G1937 Tripterygium wilfordii HOM05D001372 ORTHO05D007311 7.5e-32 140.2 87 75.9
MD10G1086600 Malus domestica HOM05D001372 ORTHO05D007311 9.8e-32 139.8 87 75.9
Nn7g36402 Nelumbo nucifera HOM05D001372 ORTHO05D007311 9.8e-32 139.8 87 77.0
arahy.Tifrunner.gnm1.ann1.FTA1AJ Arachis hypogaea HOM05D001372 ORTHO05D007311 1.7e-31 139.0 83 78.3
Haze_02462 Corylus avellana HOM05D001372 ORTHO05D007311 1.7e-31 139.0 84 76.2
Potri.009G109100 Populus trichocarpa HOM05D001372 ORTHO05D007311 1.7e-31 139.0 87 72.4
BcaB03g16342 Brassica carinata HOM05D001372 ORTHO05D007311 2.2e-31 138.7 87 75.9
Ciclev10030268m.g Citrus clementina HOM05D001372 ORTHO05D007311 2.9e-31 138.3 87 74.7
Atru.chr13.1402 Acer truncatum HOM05D001372 ORTHO05D007311 3.7e-31 137.9 87 77.0
A07p04870 Brassica napus HOM05D001372 ORTHO05D007311 3.7e-31 137.9 87 75.9
Prupe.8G112600 Prunus persica HOM05D001372 ORTHO05D007311 3.7e-31 137.9 87 73.6
BcaB08g34618 Brassica carinata HOM05D001372 ORTHO05D007311 4.9e-31 137.5 87 75.9
CARHR106260 Cardamine hirsuta HOM05D001372 ORTHO05D007311 4.9e-31 137.5 87 75.9
Cc02_g18240 Coffea canephora HOM05D001372 ORTHO05D007311 4.9e-31 137.5 87 73.6
Rhsim11G0170800 Rhododendron simsii HOM05D001193 ORTHO05D007311 4.9e-31 137.5 84 76.2
Peaxi162Scf00016g00132 Petunia axillaris HOM05D001372 ORTHO05D007311 6.4e-31 137.1 87 77.0
THA.LOC104807341 Tarenaya hassleriana HOM05D001372 ORTHO05D007311 6.4e-31 137.1 87 75.9
BcaC06g36100 Brassica carinata HOM05D001372 ORTHO05D007311 8.3e-31 136.7 87 75.9
C07p07850 Brassica napus HOM05D001372 ORTHO05D007311 8.3e-31 136.7 87 75.9
Duzib052G0457 Durio zibethinus HOM05D001372 ORTHO05D007311 8.3e-31 136.7 87 74.7
TWI38G0580 Tripterygium wilfordii HOM05D001372 ORTHO05D007311 8.3e-31 136.7 87 75.9
BolC7t41203H Brassica oleracea HOM05D001372 ORTHO05D007311 1.1e-30 136.3 86 75.6
Migut.N01213 Erythranthe guttata HOM05D001372 ORTHO05D007311 1.1e-30 136.3 87 74.7
Sp3g29230 Schrenkiella parvula HOM05D001372 ORTHO05D007311 1.1e-30 136.3 87 75.9
Eucgr.G00508 Eucalyptus grandis HOM05D001372 ORTHO05D007311 1.4e-30 136.0 87 73.6
Lalb_Chr01g0002991 Lupinus albus HOM05D001372 ORTHO05D007311 1.4e-30 136.0 87 75.9
vmacro02159 Vaccinium macrocarpon HOM05D001193 ORTHO05D007311 1.4e-30 136.0 84 72.6
BraA07t28279Z Brassica rapa HOM05D001372 ORTHO05D007311 1.9e-30 135.6 85 74.1
Eucgr.F03329 Eucalyptus grandis HOM05D001372 ORTHO05D007311 1.9e-30 135.6 87 74.7
Eucgr.G01534 Eucalyptus grandis HOM05D001372 ORTHO05D007311 1.9e-30 135.6 87 73.6
Aqoxy6G00480 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 2.4e-30 135.2 87 74.7
AUR62021787 Chenopodium quinoa HOM05D001372 ORTHO05D007311 2.4e-30 135.2 87 72.4
SalBow5G1173 Salvia bowleyana HOM05D001372 ORTHO05D007311 2.4e-30 135.2 87 73.6
AUR62008308 Chenopodium quinoa HOM05D001372 ORTHO05D007311 3.2e-30 134.8 87 71.3
AUR62008309 Chenopodium quinoa HOM05D001372 ORTHO05D007311 3.2e-30 134.8 87 71.3
SalBow3G1216 Salvia bowleyana HOM05D001372 ORTHO05D007311 3.2e-30 134.8 87 73.6
BcaC01g03046 Brassica carinata HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 75.9
COL.COLO4_17203 Corchorus olitorius HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 73.6
COL.COLO4_17775 Corchorus olitorius HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 73.6
Duzib132G0052 Durio zibethinus HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 72.4
HanXRQChr03g0074331 Helianthus annuus HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 74.7
Lsat_1_v5_gn_9_109081 Lactuca sativa HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 72.4
RcHm_v2.0_Chr6g0260171 Rosa chinensis HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 71.3
RcHm_v2.0_Chr6g0260511 Rosa chinensis HOM05D001372 ORTHO05D007311 4.1e-30 134.4 87 71.3
AUR62025645 Chenopodium quinoa HOM05D001372 ORTHO05D007311 5.4e-30 134.0 87 71.3
Gohir.D12G042200 Gossypium hirsutum HOM05D001372 ORTHO05D007311 5.4e-30 134.0 87 72.4
Gorai.008G044200 Gossypium raimondii HOM05D001372 ORTHO05D007311 5.4e-30 134.0 87 72.4
Carub.0003s2981 Capsella rubella HOM05D001372 ORTHO05D007311 7.0e-30 133.7 85 72.9
CAN.G322.87 Capsicum annuum HOM05D001372 ORTHO05D007311 7.0e-30 133.7 87 72.4
FAN28G0653 Fragaria x ananassa HOM05D001372 ORTHO05D007311 7.0e-30 133.7 87 70.1
CAN.G134.164 Capsicum annuum HOM05D001372 ORTHO05D007311 1.2e-29 132.9 86 70.9
Cpa.g.sc62.81 Carica papaya HOM05D001372 ORTHO05D007311 1.2e-29 132.9 87 72.4
CDE07G0396 Ceratophyllum demersum HOM05D001372 ORTHO05D007311 1.2e-29 132.9 87 70.1
FAN26G1996 Fragaria x ananassa HOM05D001372 ORTHO05D007311 1.2e-29 132.9 86 69.8
Gohir.A12G030200 Gossypium hirsutum HOM05D001372 ORTHO05D007311 1.2e-29 132.9 87 73.6
EL10Ac5g10871 Beta vulgaris HOM05D001372 ORTHO05D007311 2.1e-29 132.1 83 72.3
FAN28G0897 Fragaria x ananassa HOM05D001372 ORTHO05D007311 2.1e-29 132.1 86 68.6
Sc14g0001710 Simmondsia chinensis HOM05D001372 ORTHO05D007311 2.1e-29 132.1 87 72.4
THA.LOC104819597 Tarenaya hassleriana HOM05D001372 ORTHO05D007311 2.1e-29 132.1 87 73.6
AL3G47750 Arabidopsis lyrata HOM05D001372 ORTHO05D002010 2.7e-29 131.7 83 74.7
AT2G15910 Arabidopsis thaliana HOM05D001372 ORTHO05D002010 2.7e-29 131.7 84 73.8
BraA03t13697Z Brassica rapa HOM05D001372 ORTHO05D002010 2.7e-29 131.7 85 75.3
FAN19G1239 Fragaria x ananassa HOM05D001372 ORTHO05D007311 2.7e-29 131.7 86 67.4
Gohir.A09G221800 Gossypium hirsutum HOM05D001372 ORTHO05D007311 2.7e-29 131.7 87 71.3
RcHm_v2.0_Chr6g0260501 Rosa chinensis HOM05D001372 ORTHO05D007311 2.7e-29 131.7 87 70.1
RcHm_v2.0_Chr6g0260771 Rosa chinensis HOM05D001372 ORTHO05D007311 2.7e-29 131.7 87 70.1
Thecc.02G028600 Theobroma cacao HOM05D001372 ORTHO05D007311 2.7e-29 131.7 87 71.3
Nitab4.5_0008194g0080 Nicotiana tabacum HOM05D001372 ORTHO05D007311 3.5e-29 131.3 80 77.5
Sabra09G0083300 Salix brachista HOM05D001372 ORTHO05D007311 3.5e-29 131.3 87 69.0
Ah.02g112890 Amaranthus hybridus HOM05D001372 ORTHO05D007311 4.6e-29 131.0 87 69.0
Ah.02g112920 Amaranthus hybridus HOM05D001372 ORTHO05D007311 4.6e-29 131.0 87 69.0
C03p56710 Brassica napus HOM05D001372 ORTHO05D002010 4.6e-29 131.0 85 75.3
BolC3t17955H Brassica oleracea HOM05D001372 ORTHO05D002010 4.6e-29 131.0 85 75.3
ATR0807G173 Amborella trichopoda HOM05D001372 ORTHO05D007311 6.0e-29 130.6 87 71.3
Aqoxy230s002 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 6.0e-29 130.6 87 70.1
Aqoxy4G03213 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 6.0e-29 130.6 87 70.1
Oeu010568.1 Olea europaea HOM05D001372 ORTHO05D007311 6.0e-29 130.6 87 70.1
CDE09G1189 Ceratophyllum demersum HOM05D001455 ORTHO05D001587 7.8e-29 130.2 87 69.0
Hma1.2p1_0584F.1_g183260 Hydrangea macrophylla HOM05D001372 ORTHO05D007311 1.0e-28 129.8 87 69.0
A03p45650 Brassica napus HOM05D001372 ORTHO05D002010 1.3e-28 129.4 85 74.1
CSS0001418 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 1.7e-28 129.0 87 71.3
CSS0020019 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 1.7e-28 129.0 87 71.3
QL11p039238 Quercus lobata HOM05D001372 ORTHO05D007311 3.9e-28 127.9 84 71.4
Aa31LG8G13440 Aethionema arabicum HOM05D001372 ORTHO05D007311 5.1e-28 127.5 87 71.3
Ah.11g045560 Amaranthus hybridus HOM05D001372 ORTHO05D007311 5.1e-28 127.5 87 67.8
Thhalv10023083m.g Eutrema salsugineum HOM05D001372 ORTHO05D002010 1.9e-27 125.6 62 88.7
Oeu003708.1 Olea europaea HOM05D001372 ORTHO05D007311 2.5e-27 125.2 84 69.0
Nitab4.5_0004946g0010 Nicotiana tabacum HOM05D001372 ORTHO05D007311 4.3e-27 124.4 69 81.2
Atru.chr5.2877 Acer truncatum HOM05D001372 ORTHO05D007311 7.3e-27 123.6 87 67.8
CSS0021822 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 9.5e-27 123.2 87 66.7
unitig_60.g25449 Utricularia gibba HOM05D001372 ORTHO05D007311 9.5e-27 123.2 87 69.0
HPP92_025391 Vanilla planifolia HOM05D001372 ORTHO05D007311 1.8e-25 119.0 77 70.1
Gorai.006G245400 Gossypium raimondii HOM05D001372 ORTHO05D007311 2.3e-25 118.6 87 66.7
Mapoly0002s0208 Marchantia polymorpha HOM05D001372 ORTHO05D007311 2.0e-24 115.5 86 60.5
Pp3c17_11290 Physcomitrium patens HOM05D001372 ORTHO05D007311 2.0e-24 115.5 87 63.2
Gohir.A04G115800 Gossypium hirsutum HOM05D001372 ORTHO05D007311 3.4e-24 114.8 77 68.8
Cre16.g653850 Chlamydomonas reinhardtii HOM05D001372 ORTHO05D007311 1.1e-22 109.8 78 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4003 Anthoceros agrestis HOM05D001372 ORTHO05D007311 1.4e-22 109.4 64 75.0
SMO111G0193 Selaginella moellendorffii HOM05D001372 ORTHO05D007311 7.1e-22 107.1 58 81.0
Zm00001eb389160 Zea mays HOM05D001372 ORTHO05D007311 7.1e-22 107.1 61 72.1
Lsat_1_v5_gn_2_32760 Lactuca sativa HOM05D001372 ORTHO05D007311 2.7e-21 105.1 71 66.2
Os06g0661600 Oryza sativa ssp. japonica HOM05D001372 ORTHO05D007311 2.7e-21 105.1 61 73.8
arahy.Tifrunner.gnm1.ann1.YI8NBA Arachis hypogaea HOM05D018927 ORTHO05D003639 6.0e-21 104.0 53 86.8
Nitab4.5_0001401g0190 Nicotiana tabacum HOM05D001372 ORTHO05D007311 1.7e-20 102.4 51 88.2
SHI05448 Sapria himalayana HOM05D001372 ORTHO05D007311 3.0e-20 101.7 54 77.8
HanXRQChr07g0193971 Helianthus annuus HOM05D001372 ORTHO05D007311 8.6e-20 100.1 66 68.2
RcHm_v2.0_Chr6g0259971 Rosa chinensis HOM05D001372 ORTHO05D007311 5.6e-19 97.4 66 66.7
Zm00001eb274880 Zea mays HOM05D001372 ORTHO05D007311 2.1e-18 95.5 54 74.1
MCO08G009 Micromonas commoda HOM05D001372 ORTHO05D007311 7.6e-16 87.0 60 55.0
Cc02_g18230 Coffea canephora HOM05D001372 ORTHO05D007311 3.5e-13 78.2 44 75.0
PRCOL_00006747 Prasinoderma coloniale HOM05D001372 ORTHO05D007311 3.5e-13 78.2 59 55.9


User provided reference genes

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