Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 0.0e+00 1260.0 634 100.0
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 5.2e-308 1060.4 634 83.3
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 5.1e-303 1043.9 637 83.8
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 1.4e-263 912.9 644 72.2
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 4.5e-259 897.9 646 71.5
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 3.6e-256 888.3 640 70.8
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 5.9e-251 870.9 647 69.6
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 6.7e-247 857.4 650 67.8
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 6.7e-247 857.4 650 67.8
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 1.2e-235 820.1 647 65.1
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 5.9e-235 817.8 633 65.7
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 2.2e-234 815.8 655 64.0
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 6.8e-231 804.3 644 63.5
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 1.2e-230 803.5 635 65.7
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 6.3e-229 797.7 649 63.6
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 1.8e-228 796.2 647 63.1
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 3.1e-228 795.4 650 63.2
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 3.1e-228 795.4 642 62.9
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 5.4e-228 794.7 647 63.7
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 4.2e-225 785.0 643 61.3
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 6.8e-223 777.7 654 62.7
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 3.7e-221 771.9 535 71.8
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 1.3e-218 763.5 636 62.3
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 1.1e-217 760.4 616 63.8
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 4.3e-217 758.4 629 61.4
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 7.3e-217 757.7 638 61.8
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 6.8e-215 751.1 653 60.5
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 1.3e-213 746.9 637 62.5
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 3.7e-213 745.3 654 60.4
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 4.9e-213 745.0 659 58.0
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 6.4e-213 744.6 639 61.3
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 8.3e-213 744.2 641 61.5
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 9.2e-212 740.7 654 59.6
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 3.5e-211 738.8 525 71.8
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 4.6e-211 738.4 668 58.8
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.3e-210 736.9 638 60.2
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 3.9e-210 735.3 655 59.1
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 2.5e-209 732.6 632 60.4
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 2.5e-209 732.6 647 59.5
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 9.5e-209 730.7 662 59.2
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 9.5e-209 730.7 640 61.6
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 2.1e-208 729.6 683 57.2
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 3.1e-207 725.7 662 58.8
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 2.6e-206 722.6 654 58.1
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 2.4e-204 716.1 633 59.1
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 9.2e-204 714.1 637 58.9
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 1.2e-203 713.8 637 58.6
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 6.0e-203 711.4 647 56.3
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 5.6e-201 704.9 640 57.5
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 7.3e-201 704.5 639 57.6
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 9.5e-201 704.1 647 57.5
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.2e-200 703.7 652 59.4
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 4.7e-200 701.8 638 57.2
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 6.2e-200 701.4 629 59.1
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 8.1e-200 701.0 643 58.2
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 1.4e-199 700.3 652 58.4
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 8.9e-199 697.6 643 57.7
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 1.5e-198 696.8 642 57.8
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 6.4e-197 691.4 653 56.7
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 8.3e-197 691.0 651 56.8
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 1.9e-196 689.9 647 57.2
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 2.1e-195 686.4 645 56.1
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 2.7e-195 686.0 642 56.9
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.0e-194 684.1 638 57.1
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 2.3e-194 682.9 649 56.2
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 2.5e-193 679.5 606 59.1
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 2.1e-192 676.4 640 56.4
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 6.2e-192 674.9 648 56.3
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 1.8e-191 673.3 643 55.5
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 5.2e-191 671.8 635 55.4
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 5.2e-191 671.8 635 55.1
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 1.2e-190 670.6 658 54.6
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 2.9e-189 666.0 644 55.3
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 2.9e-189 666.0 634 55.0
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 3.8e-189 665.6 644 55.0
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 4.9e-189 665.2 644 54.7
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 2.4e-188 662.9 641 54.8
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 1.2e-187 660.6 643 54.1
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 1.2e-187 660.6 642 55.0
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.7e-186 656.8 676 53.7
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.4e-180 637.1 592 57.3
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 2.8e-176 622.9 567 58.0
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 6.2e-176 621.7 681 52.3
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 6.2e-176 621.7 679 49.8
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 8.1e-176 621.3 519 67.6
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 1.4e-175 620.5 636 51.3
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 4.0e-175 619.0 491 64.0
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 5.4e-172 608.6 653 52.5
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 5.8e-166 588.6 634 52.2
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 2.7e-163 579.7 492 60.4
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 2.1e-160 570.1 528 58.1
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 4.9e-157 558.9 651 48.7
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 4.2e-156 555.8 647 47.1
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 2.3e-154 550.1 495 57.2
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 1.1e-153 547.7 696 46.4
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 2.0e-150 537.0 538 54.1
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.5e-142 510.8 604 47.8
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 4.5e-142 509.2 282 87.6
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.4e-140 504.2 483 56.9
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 2.3e-130 470.3 644 41.9
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 3.7e-120 436.4 439 55.6
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 1.0e-117 428.3 282 80.1
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 6.5e-117 425.6 747 37.1
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 1.0e-109 401.7 686 38.3
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 3.9e-93 346.7 602 36.7
AagrBONN_evm.TU.Sc2ySwM_368.1496 Anthoceros agrestis HOM05D005709 ORTHO05D006306 1.6e-91 341.3 648 35.0
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 4.9e-88 329.7 388 49.5
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 7.8e-86 322.4 290 59.7
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 2.5e-84 317.4 337 54.6
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 4.7e-83 313.2 342 51.5
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 2.6e-81 307.4 291 58.4
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 8.6e-77 292.4 424 46.9
CBR_g78875 Chara braunii HOM05D005709 ORTHO05D006306 1.1e-74 285.4 516 36.6
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.0e-69 268.9 328 49.1
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 2.9e-64 250.8 206 65.5
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 5.8e-57 226.5 180 63.3
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 2.4e-55 221.1 358 40.8
TAR381G1451 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.3e-48 198.7 149 63.1
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 1.3e-45 188.7 381 38.3
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 3.9e-45 187.2 187 52.9
BcaC01g02779 Brassica carinata HOM05D005709 ORTHO05D006306 6.9e-42 176.4 121 64.5
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 1.5e-41 175.3 155 58.1
Cre03.g145707 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 7.9e-38 162.9 321 33.3
PRCOL_00002122 Prasinoderma coloniale HOM05D005709 ORTHO05D006306 9.7e-36 156.0 678 28.3
BcaC01g02777 Brassica carinata HOM05D005709 ORTHO05D006306 6.5e-24 116.7 174 40.8
TPR.G34440 Trifolium pratense HOM05D005709 ORTHO05D006306 8.5e-24 116.3 63 84.1
TPR.G25795 Trifolium pratense HOM05D005709 ORTHO05D006306 9.4e-23 112.8 63 82.5
Phvul.008G217000 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 1.1e-18 99.4 61 82.0
SEGI_13404 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 1.4e-18 99.0 127 46.5
HPP92_015331 Vanilla planifolia HOM05D005709 ORTHO05D006306 1.9e-15 88.6 68 61.8
SMO207G0001 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.0e-13 82.8 92 43.5
SMO162G0006 Selaginella moellendorffii HOM05D000981 ORTHO05D006306 1.4e-13 82.4 157 35.0
CARHR215690 Cardamine hirsuta HOM05D005709 ORTHO05D006306 4.4e-12 77.4 55 69.1
BolC2t12478H Brassica oleracea HOM05D005709 ORTHO05D006306 1.4e-10 72.4 104 40.4
SalBow5G5475 Salvia bowleyana HOM05D036480 ORTHO05D006306 5.3e-10 70.5 95 44.2
C02p64140 Brassica napus HOM05D005709 ORTHO05D006306 2.9e-08 64.7 104 38.5
Cre03.g145667 Chlamydomonas reinhardtii HOM05D005709 ORTHO05D006306 1.2e-06 59.3 102 33.3


User provided reference genes

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