Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 4.1e-47 191.0 96 100.0
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.7e-40 169.1 94 90.4
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 2.2e-40 168.7 94 90.4
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 4.9e-40 167.5 96 89.6
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 8.3e-40 166.8 94 89.4
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 5.4e-39 164.1 93 87.1
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 9.2e-39 163.3 94 86.2
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 1.6e-38 162.5 95 88.4
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 4.5e-38 161.0 91 86.8
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 7.8e-38 160.2 96 88.5
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.7e-37 159.1 93 86.0
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 6.6e-37 157.1 94 83.0
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 8.6e-37 156.8 96 81.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 8.6e-37 156.8 94 84.0
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.5e-36 156.0 92 83.7
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 2.5e-36 155.2 91 85.7
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 7.3e-36 153.7 95 81.1
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 7.3e-36 153.7 90 84.4
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 9.5e-36 153.3 94 80.9
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 9.5e-36 153.3 92 80.4
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.6e-35 152.5 93 82.8
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.1e-35 152.1 85 87.1
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.8e-35 151.8 86 86.0
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.6e-35 151.4 96 79.2
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 4.7e-35 151.0 87 86.2
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 6.1e-35 150.6 90 85.6
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.0e-34 149.8 93 79.6
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.0e-34 149.8 91 81.3
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.0e-34 149.8 91 81.3
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.4e-34 149.4 94 78.7
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 2.3e-34 148.7 87 85.1
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 2.3e-34 148.7 93 80.6
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.3e-34 148.7 94 79.8
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 3.1e-34 148.3 93 81.7
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 4.0e-34 147.9 81 90.1
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 4.0e-34 147.9 83 86.7
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 5.2e-34 147.5 83 84.3
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.8e-34 147.1 94 81.9
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 1.2e-33 146.4 91 81.3
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.2e-33 146.4 91 80.2
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 1.5e-33 146.0 93 77.4
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.5e-33 146.0 92 80.4
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 2.0e-33 145.6 86 82.6
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.0e-33 145.6 86 80.2
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.0e-33 145.6 86 80.2
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 2.0e-33 145.6 94 80.9
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 2.0e-33 145.6 93 76.3
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.6e-33 145.2 93 76.3
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 2.6e-33 145.2 81 86.4
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.4e-33 144.8 81 86.4
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 3.4e-33 144.8 83 83.1
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 4.4e-33 144.4 81 86.4
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 4.4e-33 144.4 97 76.3
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 4.4e-33 144.4 93 80.6
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 5.8e-33 144.1 81 87.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 5.8e-33 144.1 83 81.9
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 7.5e-33 143.7 95 80.0
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 7.5e-33 143.7 87 80.5
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 9.8e-33 143.3 85 81.2
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.7e-32 142.5 94 72.3
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.7e-32 142.5 85 77.6
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.7e-32 142.5 79 86.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.7e-32 142.5 82 85.4
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.2e-32 142.1 93 73.1
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 2.2e-32 142.1 93 73.1
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 2.2e-32 142.1 85 77.6
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.7e-32 141.4 95 80.0
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 3.7e-32 141.4 91 79.1
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 4.9e-32 141.0 87 78.2
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 4.9e-32 141.0 83 80.7
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 6.4e-32 140.6 91 78.0
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 6.4e-32 140.6 99 73.7
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 8.3e-32 140.2 94 74.5
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 8.3e-32 140.2 94 74.5
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 8.3e-32 140.2 94 74.5
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 8.3e-32 140.2 93 72.0
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 8.3e-32 140.2 84 79.8
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.1e-31 139.8 85 77.6
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.1e-31 139.8 97 75.3
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.9e-31 139.0 92 76.1
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.1e-31 137.9 108 69.4
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 5.4e-31 137.5 122 61.5
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 7.0e-31 137.1 83 78.3
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 7.0e-31 137.1 95 72.6
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 9.2e-31 136.7 94 73.4
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 73.4
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 73.4
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 73.4
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.2e-30 136.3 94 73.4
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 1.2e-30 136.3 91 76.9
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 1.6e-30 136.0 94 73.4
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.6e-30 136.0 116 65.5
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 2.0e-30 135.6 91 74.7
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 2.0e-30 135.6 93 68.8
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 2.7e-30 135.2 89 75.3
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.7e-30 135.2 78 89.7
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 3.5e-30 134.8 94 72.3
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 3.5e-30 134.8 91 75.8
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 4.6e-30 134.4 76 81.6
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 3.0e-29 131.7 83 77.1
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 3.0e-29 131.7 71 85.9
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 3.9e-29 131.3 96 69.8
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 5.0e-29 131.0 96 71.9
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 6.6e-29 130.6 88 71.6
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.9e-28 129.0 84 82.1
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 9.5e-28 126.7 75 78.7
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.2e-27 126.3 80 82.5
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 3.6e-27 124.8 79 79.7
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 6.2e-27 124.0 79 82.3
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 6.2e-27 124.0 88 68.2
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 5.2e-26 120.9 79 78.5
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 8.9e-26 120.2 81 79.0
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 2.6e-25 118.6 82 73.2
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.4e-25 118.2 79 77.2
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 5.8e-25 117.5 96 69.8
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.7e-24 115.9 66 84.8
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.7e-24 114.8 65 81.5
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.1e-23 113.2 64 84.4
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-21 106.3 91 61.5
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.5e-20 102.8 69 73.9
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.8e-18 95.9 88 60.2
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 2.2e-16 89.0 57 80.7
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 6.4e-16 87.4 46 89.1
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 5.4e-15 84.3 90 46.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 1.3e-13 79.7 60 65.0
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 2.3e-13 79.0 62 58.1
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.8e-10 69.3 52 65.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 2.4e-10 68.9 49 65.3
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-10 67.4 48 66.7
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-10 67.4 48 66.7
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-10 67.4 48 66.7


User provided reference genes

Program Settings