Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g057960 Pisum sativum HOM05D003726 ORTHO05D003520 3.4e-176 621.7 347 100.0
Medtr5g071090 Medicago truncatula HOM05D003726 ORTHO05D003520 4.5e-96 355.5 337 64.4
TPR.G34575 Trifolium pratense HOM05D003726 ORTHO05D003520 4.7e-93 345.5 346 63.3
Ca_05609_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 8.9e-76 288.1 251 69.7
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 2.7e-64 250.0 384 49.0
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.3e-63 247.7 410 45.4
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 6.2e-61 238.8 409 44.5
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 1.3e-55 221.1 401 43.1
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 9.6e-54 214.9 421 41.6
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 3.1e-52 209.9 405 42.7
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 1.2e-40 171.4 433 37.6
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 5.1e-39 166.0 432 37.3
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 9.0e-36 155.2 410 34.6
arahy.Tifrunner.gnm1.ann1.8UNH89 Arachis hypogaea HOM05D003726 ORTHO05D003520 1.2e-35 154.8 355 36.1
arahy.Tifrunner.gnm1.ann1.XHL4C7 Arachis hypogaea HOM05D003726 ORTHO05D003520 2.1e-32 144.1 362 35.6
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 1.3e-31 141.4 394 35.0
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 5.7e-30 136.0 428 33.9
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 6.3e-29 132.5 424 34.2
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.4e-28 130.6 412 32.8
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 5.0e-26 122.9 418 34.2
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 2.5e-25 120.6 322 33.9
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.4e-23 114.8 415 32.5
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 6.3e-21 105.9 403 31.5
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 8.2e-21 105.5 422 30.6
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.1e-20 103.6 446 30.7
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 1.2e-19 101.7 443 30.2
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 2.6e-19 100.5 421 29.7
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 5.9e-19 99.4 413 29.3
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 4.2e-17 93.2 387 31.8
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 3.6e-16 90.1 404 31.9
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 1.4e-15 88.2 374 32.1
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 3.0e-15 87.0 386 30.6
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 6.7e-15 85.9 405 31.1
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 3.3e-14 83.6 422 27.3
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 7.4e-14 82.4 363 30.3
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 1.3e-13 81.6 396 29.0
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 2.2e-13 80.9 374 31.3
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.8e-13 79.7 389 29.3
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 8.2e-13 79.0 391 29.4
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.1e-12 78.6 406 28.6
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.1e-12 77.0 359 28.4
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 1.2e-11 75.1 425 28.2
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.5e-11 74.7 392 29.3
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.5e-11 73.2 390 28.7
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.9e-11 72.8 236 29.2
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 7.7e-11 72.4 397 28.0
Lsat_1_v5_gn_8_70880 Lactuca sativa HOM05D003726 ORTHO05D003520 7.7e-11 72.4 336 30.7
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.3e-10 71.6 305 28.2
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.2e-10 70.9 353 28.6
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 5.0e-10 69.7 383 30.3
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.5e-09 68.2 390 28.2
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 7.2e-09 65.9 381 29.4
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.2e-08 65.1 381 27.8
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 4.7e-08 63.2 246 29.7
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 8.0e-08 62.4 384 27.9
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 8.0e-08 62.4 400 27.2
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.4e-07 61.6 318 27.4
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.8e-07 61.2 368 27.7
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 2.3e-07 60.8 368 27.7
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 4.0e-07 60.1 302 30.8
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 6.7e-07 59.3 396 25.8
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 2.0e-06 57.8 438 26.3
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.0e-06 57.8 357 26.6
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.6e-06 57.4 286 29.7
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 3.3e-06 57.0 410 23.9
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 4.4e-06 56.6 303 27.7
ECA236G2409 Erigeron canadensis HOM05D000674 ORTHO05D001490 9.7e-06 55.5 256 29.3


User provided reference genes

Program Settings