Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g053480 Pisum sativum HOM05D000855 ORTHO05D002321 1.2e-185 653.3 380 100.0
Psat2g053520 Pisum sativum HOM05D004426 ORTHO05D005417 1.1e-146 523.9 378 75.9
Psat6g140320 Pisum sativum HOM05D000855 ORTHO05D002321 1.5e-124 450.3 309 80.3
Ca_09783_v3 Cicer arietinum L. HOM05D000855 ORTHO05D002321 2.0e-89 333.6 301 63.8
TPR.G18567 Trifolium pratense HOM05D000855 ORTHO05D002321 4.5e-89 332.4 302 64.2
Medtr1g072780 Medicago truncatula HOM05D000855 ORTHO05D002321 2.4e-82 310.1 302 60.6
Glyma.20G198402 Glycine max HOM05D000855 ORTHO05D002321 1.0e-69 268.1 306 54.9
Phvul.007G134100 Phaseolus vulgaris HOM05D000855 ORTHO05D002321 1.4e-66 257.7 294 51.0
VMungo0720G2399 Vigna mungo HOM05D000855 ORTHO05D002321 5.9e-65 252.3 300 50.3
Lj5g0013876 Lotus japonicus HOM05D000855 ORTHO05D002321 5.8e-60 235.7 297 50.2
Glyma.10G192100 Glycine max HOM05D000855 ORTHO05D002321 7.0e-58 228.8 271 53.1
Lalb_Chr03g0036491 Lupinus albus HOM05D000855 ORTHO05D002321 4.3e-55 219.5 303 47.9
Lalb_Chr03g0036481 Lupinus albus HOM05D000855 ORTHO05D002321 1.5e-52 211.1 299 47.2
arahy.Tifrunner.gnm1.ann1.5RAP3T Arachis hypogaea HOM05D002303 ORTHO05D006504 7.5e-52 208.8 301 46.2
arahy.Tifrunner.gnm1.ann1.FDC534 Arachis hypogaea HOM05D002303 ORTHO05D006504 1.2e-49 201.4 301 45.5
Glyma.10G116800 Glycine max HOM05D000855 ORTHO05D002321 2.5e-47 193.7 302 44.0
Glyma.02G087500 Glycine max HOM05D000855 ORTHO05D002321 2.8e-46 190.3 298 44.0
Lj6g0011965 Lotus japonicus HOM05D000855 ORTHO05D002321 3.6e-46 189.9 298 43.3
VMungo0720G0251 Vigna mungo HOM05D000855 ORTHO05D002321 1.0e-40 171.8 303 39.9
Phvul.007G240300 Phaseolus vulgaris HOM05D000855 ORTHO05D002321 1.7e-40 171.0 298 39.6
Ca_27423_v3 Cicer arietinum L. HOM05D000855 ORTHO05D002321 3.3e-39 166.8 294 40.5
QL08p056900 Quercus lobata HOM05D000855 ORTHO05D002321 4.3e-39 166.4 299 39.8
TPR.G35697 Trifolium pratense HOM05D000855 ORTHO05D002321 9.5e-39 165.2 330 38.8
Psat7g035480 Pisum sativum HOM05D003876 ORTHO05D004560 8.9e-37 158.7 118 74.6
Psat7g238760 Pisum sativum HOM05D000855 ORTHO05D015734 1.2e-36 158.3 93 83.9
Psat7g238720 Pisum sativum HOM05D000855 ORTHO05D015734 1.5e-36 157.9 93 83.9
Duzib114G0150 Durio zibethinus HOM05D000855 ORTHO05D002321 7.6e-36 155.6 304 38.2
Cfa001590 Carpinus fangiana HOM05D000855 ORTHO05D002321 4.9e-35 152.9 306 38.6
MELO3C011728.2 Cucumis melo HOM05D000855 ORTHO05D002321 2.4e-34 150.6 320 35.6
Medtr1g049120 Medicago truncatula HOM05D000855 ORTHO05D002321 4.2e-34 149.8 321 37.7
Psat6g049760 Pisum sativum HOM05D000855 ORTHO05D002321 4.2e-34 149.8 297 38.0
Sabra10G0167800 Salix brachista HOM05D000855 ORTHO05D002321 9.2e-34 148.7 300 38.0
Psat7g035440 Pisum sativum HOM05D000278 ORTHO05D002321 1.6e-33 147.9 105 76.2
Haze_16938 Corylus avellana HOM05D000855 ORTHO05D002321 2.7e-33 147.1 306 36.9
Potri.010G216900 Populus trichocarpa HOM05D000855 ORTHO05D002321 3.5e-33 146.7 298 36.2
Potri.008G044600 Populus trichocarpa HOM05D000855 ORTHO05D002321 4.6e-33 146.4 302 37.1
CiPaw.02G176900 Carya illinoinensis HOM05D000855 ORTHO05D002321 2.3e-32 144.1 323 35.9
ClCG02G013880 Citrullus lanatus HOM05D000855 ORTHO05D002321 2.3e-32 144.1 321 35.5
Manes.10G041900 Manihot esculenta HOM05D000855 ORTHO05D002321 6.6e-32 142.5 298 38.9
COL.COLO4_23754 Corchorus olitorius HOM05D000855 ORTHO05D002321 8.7e-32 142.1 306 38.2
Manes.10G041700 Manihot esculenta HOM05D000855 ORTHO05D002321 1.5e-31 141.4 300 37.0
TAR633G0412 Trochodendron aralioides HOM05D000855 ORTHO05D002321 1.5e-31 141.4 274 38.0
CsaV3_5G006280 Cucumis sativus L. HOM05D000855 ORTHO05D002321 7.3e-31 139.0 321 35.5
TWI38G0064 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 2.1e-30 137.5 316 34.8
Sed0014953 Sechium edule HOM05D000855 ORTHO05D002321 2.8e-30 137.1 320 34.4
Atru.chr12.632 Acer truncatum HOM05D000855 ORTHO05D002321 3.6e-30 136.7 344 32.0
Ciclev10030525m.g Citrus clementina HOM05D000855 ORTHO05D002321 8.1e-30 135.6 305 36.7
Thecc.10G067400 Theobroma cacao HOM05D000855 ORTHO05D002321 6.9e-29 132.5 304 35.9
Dinv31342 Davidia involucrata HOM05D000855 ORTHO05D002321 9.0e-29 132.1 297 35.7
CiPaw.02G176700 Carya illinoinensis HOM05D000855 ORTHO05D002321 1.5e-28 131.3 308 36.7
Dinv31338 Davidia involucrata HOM05D000855 ORTHO05D002321 3.4e-28 130.2 301 36.2
Sabra08G0030900 Salix brachista HOM05D000855 ORTHO05D002321 3.4e-28 130.2 312 34.9
Sed0010715 Sechium edule HOM05D000855 ORTHO05D002321 4.2e-26 123.2 302 34.1
Gohir.A05G344100 Gossypium hirsutum HOM05D000855 ORTHO05D002321 2.1e-25 120.9 295 33.6
EL10Ac3g07139 Beta vulgaris HOM05D000855 ORTHO05D002321 1.7e-24 117.9 310 32.3
Prupe.2G219200 Prunus persica HOM05D000855 ORTHO05D002321 1.7e-24 117.9 316 32.6
AUR62026103 Chenopodium quinoa HOM05D000855 ORTHO05D002321 2.3e-24 117.5 305 35.4
Gohir.A05G344300 Gossypium hirsutum HOM05D000855 ORTHO05D002321 3.0e-24 117.1 297 33.0
Gorai.012G093500 Gossypium raimondii HOM05D000855 ORTHO05D002321 3.0e-24 117.1 297 33.0
Lj1C924G11 Lonicera japonica HOM05D000855 ORTHO05D001431 3.0e-24 117.1 306 34.3
Gohir.D04G082800 Gossypium hirsutum HOM05D000855 ORTHO05D002321 6.6e-24 115.9 295 32.9
CSS0010994 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D002321 2.5e-23 114.0 299 32.1
AUR62024512 Chenopodium quinoa HOM05D000855 ORTHO05D002321 7.3e-23 112.5 304 35.2
Psat1g105760 Pisum sativum HOM05D003876 ORTHO05D004560 2.1e-22 110.9 160 49.4
EL10Ac5g12631 Beta vulgaris HOM05D000855 ORTHO05D002321 2.8e-22 110.5 303 33.0
TAR623G1395 Trochodendron aralioides HOM05D000855 ORTHO05D002321 2.8e-22 110.5 307 31.9
Gohir.D04G082500 Gossypium hirsutum HOM05D000855 ORTHO05D002321 4.8e-22 109.8 299 34.1
Sc20g0002090 Simmondsia chinensis HOM05D000855 ORTHO05D002321 8.1e-22 109.0 325 32.0
vmacro04892 Vaccinium macrocarpon HOM05D000855 ORTHO05D002321 8.1e-22 109.0 296 31.8
Gorai.012G093200 Gossypium raimondii HOM05D000855 ORTHO05D002321 1.4e-21 108.2 299 33.8
RcHm_v2.0_Chr1g0364181 Rosa chinensis HOM05D000855 ORTHO05D002321 1.8e-21 107.8 315 30.2
Actinidia38246 Actinidia chinensis HOM05D000855 ORTHO05D002321 3.1e-21 107.1 316 32.0
Rhsim09G0154300 Rhododendron simsii HOM05D000855 ORTHO05D002321 5.8e-20 102.8 296 30.4
Medtr4g036445 Medicago truncatula HOM05D000855 ORTHO05D002321 7.6e-20 102.4 215 36.3
Eucgr.G02799 Eucalyptus grandis HOM05D000855 ORTHO05D002321 9.9e-20 102.1 321 33.3
GSVIVG01016344001 Vitis vinifera HOM05D000855 ORTHO05D002321 9.9e-20 102.1 240 35.4
Nn2g12991 Nelumbo nucifera HOM05D000855 ORTHO05D002321 6.4e-19 99.4 255 32.2
AUR62010520 Chenopodium quinoa HOM05D000855 ORTHO05D002321 7.1e-18 95.9 303 30.7
PGR044G1213 Punica granatum HOM05D000855 ORTHO05D002321 2.7e-17 94.0 303 30.7
AUR62017379 Chenopodium quinoa HOM05D000855 ORTHO05D002321 7.9e-17 92.4 305 30.2
Prupe.6G241400 Prunus persica HOM05D000855 ORTHO05D002321 2.3e-16 90.9 266 32.0
TAR636G0979 Trochodendron aralioides HOM05D000855 ORTHO05D002321 2.3e-16 90.9 275 32.4
FAN03G1459 Fragaria x ananassa HOM05D000855 ORTHO05D002321 8.7e-16 89.0 312 28.2
FAN10G3244 Fragaria x ananassa HOM05D000855 ORTHO05D002321 8.7e-16 89.0 312 28.8
Psat0s2215g0120 Pisum sativum HOM05D004426 ORTHO05D005417 8.7e-16 89.0 50 92.0
FAN01G0071 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.1e-15 88.6 312 28.8
FAN03G2424 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.1e-15 88.6 312 28.8
FAN06G2522 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.5e-15 88.2 312 28.2
FvH4_7g20250 Fragaria vesca HOM05D000855 ORTHO05D002321 2.5e-15 87.4 312 28.2
Thecc.02G021700 Theobroma cacao HOM05D000855 ORTHO05D002321 4.3e-15 86.7 315 28.6
Peaxi162Scf00373g00021 Petunia axillaris HOM05D000855 ORTHO05D002321 7.4e-15 85.9 295 29.5
Aqoxy1G01590 Aquilegia oxysepala HOM05D000855 ORTHO05D002321 2.8e-14 84.0 295 30.2
PGSC0003DMG400010571 Solanum tuberosum HOM05D000855 ORTHO05D002321 2.8e-14 84.0 302 30.5
Sopen04g020580 Solanum pennellii HOM05D000855 ORTHO05D002321 4.8e-14 83.2 296 31.1
Nitab4.5_0000061g0230 Nicotiana tabacum HOM05D000855 ORTHO05D002321 3.1e-13 80.5 299 29.4
Cc09_g02640 Coffea canephora HOM05D000855 ORTHO05D002321 1.5e-12 78.2 296 28.4
MD01G1112200 Malus domestica HOM05D000855 ORTHO05D002321 1.5e-12 78.2 119 43.7
MD07G1179800 Malus domestica HOM05D000855 ORTHO05D002321 1.5e-12 78.2 301 30.2
Cpa.g.sc114.40 Carica papaya HOM05D000855 ORTHO05D002321 3.4e-12 77.0 311 29.3
Sabra06G0103400 Salix brachista HOM05D000855 ORTHO05D002321 3.4e-12 77.0 272 29.0
Haze_20651 Corylus avellana HOM05D000855 ORTHO05D002321 7.6e-12 75.9 263 27.8
PSO339G4758 Papaver somniferum HOM05D000855 ORTHO05D002321 7.6e-12 75.9 255 29.8
Thecc.02G022000 Theobroma cacao HOM05D000855 ORTHO05D002321 1.7e-11 74.7 80 50.0
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 2.9e-11 73.9 114 43.0
PSO384G0136 Papaver somniferum HOM05D000855 ORTHO05D002321 2.9e-11 73.9 255 27.8
Potri.016G085500 Populus trichocarpa HOM05D000855 ORTHO05D002321 2.9e-11 73.9 269 28.6
RcHm_v2.0_Chr3g0468791 Rosa chinensis HOM05D000855 ORTHO05D002321 2.9e-11 73.9 115 40.0
Nitab4.5_0005387g0010 Nicotiana tabacum HOM05D000855 ORTHO05D002321 6.5e-11 72.8 304 30.3
Oeu026843.1 Olea europaea HOM05D000855 ORTHO05D002321 1.1e-10 72.0 115 39.1
CiPaw.09G180000 Carya illinoinensis HOM05D000855 ORTHO05D002321 1.4e-10 71.6 281 26.7
FvH4_6g15320 Fragaria vesca HOM05D000855 ORTHO05D002321 7.1e-10 69.3 108 39.8
FAN14G3376 Fragaria x ananassa HOM05D000855 ORTHO05D002321 7.1e-10 69.3 108 39.8
Lj3C979T7 Lonicera japonica HOM05D000855 ORTHO05D002321 7.1e-10 69.3 300 26.7
Psat0s1977g0040 Pisum sativum HOM05D000855 ORTHO05D002321 7.1e-10 69.3 111 42.3
Manes.08G003300 Manihot esculenta HOM05D000855 ORTHO05D002321 9.3e-10 68.9 350 26.3
Ah.12g058150 Amaranthus hybridus HOM05D000855 ORTHO05D002321 1.2e-09 68.6 275 31.6
FAN09G3879 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.2e-09 68.6 108 38.9
FAN05G0228 Fragaria x ananassa HOM05D000855 ORTHO05D002321 1.6e-09 68.2 108 39.8
MBI14_g26603_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D002321 2.1e-09 67.8 305 26.6
Oeu055047.1 Olea europaea HOM05D000855 ORTHO05D002321 2.1e-09 67.8 298 27.2
TWI15G0675 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 2.1e-09 67.8 146 34.9
VMungo0720G0832 Vigna mungo HOM05D000855 ORTHO05D002321 2.1e-09 67.8 110 40.9
FAN02G1340 Fragaria x ananassa HOM05D000855 ORTHO05D002321 6.0e-09 66.2 108 38.9
Solyc04g049950.1 Solanum lycopersicum HOM05D000855 ORTHO05D002321 6.0e-09 66.2 292 29.1
Potri.006G131800 Populus trichocarpa HOM05D000855 ORTHO05D002321 7.9e-09 65.9 256 26.6
Aqoxy4G03191 Aquilegia oxysepala HOM05D000855 ORTHO05D002321 1.3e-08 65.1 296 27.7
CSS0000157 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D002321 3.0e-08 63.9 81 44.4
Psat0s5567g0040 Pisum sativum HOM05D004426 ORTHO05D325807 3.0e-08 63.9 41 80.5
Atru.chr8.2555 Acer truncatum HOM05D000855 ORTHO05D002321 5.1e-08 63.2 116 35.3
CAN.G113.8 Capsicum annuum HOM05D000855 ORTHO05D002321 5.1e-08 63.2 303 28.1
Medtr2g104120 Medicago truncatula HOM05D000855 ORTHO05D002321 5.1e-08 63.2 145 31.7
HPP92_012068 Vanilla planifolia HOM05D000855 ORTHO05D002321 5.1e-08 63.2 276 25.4
Oeu035143.1 Olea europaea HOM05D000855 ORTHO05D002321 6.7e-08 62.8 141 34.0
Phvul.007G163600 Phaseolus vulgaris HOM05D000855 ORTHO05D002321 1.1e-07 62.0 113 38.9
QL07p045288 Quercus lobata HOM05D000855 ORTHO05D002321 1.1e-07 62.0 330 37.0
Zm00001eb351570 Zea mays HOM05D000855 ORTHO05D002321 5.7e-07 59.7 261 27.2
Lalb_Chr21g0314651 Lupinus albus HOM05D000855 ORTHO05D002321 7.4e-07 59.3 114 35.1
COL.COLO4_27083 Corchorus olitorius HOM05D000855 ORTHO05D002321 9.6e-07 58.9 77 41.6
HPP92_018114 Vanilla planifolia HOM05D000855 ORTHO05D002321 1.3e-06 58.5 109 34.9
TWI74G1097 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 1.6e-06 58.2 113 35.4
vmacro20062 Vaccinium macrocarpon HOM05D000855 ORTHO05D002321 1.6e-06 58.2 305 25.9
TWI77G0883 Tripterygium wilfordii HOM05D000855 ORTHO05D002321 2.8e-06 57.4 113 35.4
Psat6g070600 Pisum sativum HOM05D000855 ORTHO05D002321 3.7e-06 57.0 87 36.8
Hund20160 Selenicereus undatus HOM05D000855 ORTHO05D002321 3.7e-06 57.0 302 23.8
CsaV3_3G044140 Cucumis sativus L. HOM05D000855 ORTHO05D002321 4.8e-06 56.6 113 37.2
MD12G1124400 Malus domestica HOM05D000855 ORTHO05D002321 4.8e-06 56.6 339 26.0
Medtr1g066890 Medicago truncatula HOM05D000855 ORTHO05D002321 4.8e-06 56.6 128 34.4
Actinidia04696 Actinidia chinensis HOM05D000855 ORTHO05D002321 6.2e-06 56.2 318 26.1
Actinidia19715 Actinidia chinensis HOM05D000855 ORTHO05D002321 6.2e-06 56.2 318 26.1
Psat2g055760 Pisum sativum HOM05D000855 ORTHO05D002321 6.2e-06 56.2 116 34.5
Lj5g0028198 Lotus japonicus HOM05D000855 ORTHO05D002321 8.2e-06 55.8 143 35.0


User provided reference genes

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