Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 9.4e-201 703.4 367 100.0
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 4.4e-150 535.0 373 75.1
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 2.6e-142 509.2 389 70.2
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 9.6e-121 437.6 370 62.7
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.1e-111 407.5 369 60.4
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 5.5e-108 395.2 368 59.0
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 2.5e-105 386.3 371 56.1
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 3.0e-98 362.8 370 54.9
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 3.0e-98 362.8 370 53.5
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 7.4e-97 358.2 370 54.1
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 1.5e-94 350.5 350 55.4
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 3.5e-78 296.2 370 45.9
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 3.6e-75 286.2 378 45.5
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 7.0e-71 271.9 248 57.7
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 8.6e-69 265.0 387 42.1
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 2.1e-67 260.4 271 53.5
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.8e-67 260.0 248 55.2
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 8.0e-67 258.5 256 55.9
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 5.2e-66 255.8 373 42.1
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 5.2e-66 255.8 248 54.4
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 6.8e-66 255.4 410 42.7
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 2.0e-65 253.8 268 51.5
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.0e-65 253.8 270 50.4
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 2.0e-65 253.8 250 54.0
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.0e-65 253.8 250 54.0
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 5.7e-65 252.3 364 43.4
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 3.7e-64 249.6 298 48.3
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 3.7e-64 249.6 298 48.3
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.4e-63 247.7 266 51.1
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 9.2e-63 245.0 275 49.1
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.2e-62 244.6 276 49.3
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.3e-61 241.1 271 51.3
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.3e-61 241.1 271 50.6
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 2.9e-61 240.0 268 48.5
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 3.8e-61 239.6 285 48.4
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 6.6e-61 238.8 268 50.7
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 8.6e-61 238.4 271 50.2
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 8.6e-61 238.4 250 50.8
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 1.1e-60 238.0 247 52.6
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 4.7e-59 232.6 251 51.4
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 4.7e-59 232.6 276 48.2
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.4e-58 231.1 242 51.2
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 4.0e-58 229.6 249 47.4
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 6.8e-58 228.8 249 48.6
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.2e-57 228.0 251 51.0
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.0e-57 227.3 309 42.4
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 2.0e-57 227.3 246 50.0
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 4.4e-57 226.1 238 49.6
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 6.4e-56 222.2 377 38.5
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 3.2e-55 219.9 245 48.6
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 3.2e-55 219.9 236 51.3
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 3.2e-55 219.9 234 50.9
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 3.2e-55 219.9 293 43.0
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 5.4e-55 219.2 235 49.8
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 2.7e-54 216.9 236 49.6
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 4.6e-54 216.1 235 51.5
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 6.0e-54 215.7 247 50.2
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.7e-53 214.2 299 42.8
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 8.6e-53 211.8 275 46.5
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 1.5e-52 211.1 243 46.1
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 5.6e-52 209.1 188 55.3
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 2.1e-51 207.2 235 48.9
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 3.6e-51 206.5 207 52.7
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.8e-50 204.1 211 50.7
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 2.3e-50 203.8 251 43.8
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 4.0e-50 203.0 271 43.9
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 6.8e-50 202.2 301 39.9
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 8.9e-50 201.8 301 39.9
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 2.0e-49 200.7 270 44.1
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.3e-48 198.0 239 45.6
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 6.4e-48 195.7 313 39.9
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 6.4e-48 195.7 292 43.2
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 8.3e-48 195.3 233 48.1
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 4.1e-47 193.0 246 45.1
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 4.1e-47 193.0 254 45.7
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 5.4e-47 192.6 147 65.3
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 5.4e-47 192.6 259 44.0
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.1e-44 184.9 187 55.6
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.5e-44 184.5 231 43.3
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 4.3e-44 183.0 261 41.0
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 5.6e-44 182.6 231 42.9
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 5.2e-42 176.0 158 56.3
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 6.8e-42 175.6 158 56.3
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 8.9e-42 175.3 146 58.2
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 8.9e-42 175.3 146 58.2
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 7.5e-41 172.2 278 37.8
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.2e-39 166.8 206 47.6
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 4.1e-39 166.4 223 41.7
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 3.3e-36 156.8 386 33.4
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 3.3e-36 156.8 197 48.7
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 4.3e-36 156.4 243 40.3
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 4.4e-33 146.4 199 42.2
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 8.4e-32 142.1 168 47.6
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 2.4e-31 140.6 202 42.1
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 3.2e-31 140.2 181 47.0
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 3.2e-31 140.2 171 48.5
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 6.6e-29 132.5 168 48.8
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.2e-27 128.3 235 35.3
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 9.0e-26 122.1 94 57.4
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 9.0e-26 122.1 227 34.8
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 8.4e-24 115.5 72 66.7
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 8.4e-24 115.5 69 71.0
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.1e-23 115.2 137 45.3
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 2.4e-23 114.0 72 69.4
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 5.4e-23 112.8 136 46.3
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 3.9e-21 106.7 99 49.5
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 4.5e-17 93.2 140 37.9
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 1.1e-10 72.0 48 60.4


User provided reference genes

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